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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000106_pilon:58214..60851- Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13377.1.p1 ID=MSTRG.13377.1.p1|Name=MSTRG.13377.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2638bp|location=Sequence derived from alignment at sc0000106_pilon:58214..60851- (Clytia hemisphaerica_ch_hm2_pilon)
AGCATTTTGTTGATAGGAATATTCAGTCAAGAAAAAAGTCATCTCTCGTG
AAGATGTGGTTTCTTTTTATGTTCATCCCTTATGGTGAGTTTACATAAAC
TAATACACCTCTGTGTCACAGACCCGCGGGGACCCAAGCCCCACTGGAAA
ATAGGGCAAAAATTTCGTATCCGTTGGGACCCATGGGAAAATACCCTGAA
ATTTTAACCCCCCCCCCTGGGAAATTGATTTTTCATCACCATTCGAAAAT
CAATGCTTAGAAATTGCACACCAAATCTATCCCCATTGGATTTTCTAACC
TTGGAACAATAGAGTTTCTAAACCCATTGGGATCTCAATAGGAGTTGTTA
TCCCCACTGGGAAAAAAAGTTCCGCCGGGGCTGTGAGACAGGGGTGTACT
AATGACGATGTTAGTCATGTCAAGGTAGCTCTTCAAAATTAGAATAGATA
AGCCTTACTTGTTTGAAAAAGTACGAGTAAAAAAGTTGTTCGGAAAGTTC
CAGTAATTTGGTCTGGATAAGAGGTTTGGTTCTTATTTTACCATGATCGC
AAATTGCGCTAGTATATCGAAATTGTATTCAGGACCACCAGACTCTGATA
ACAGATTTCTGTTTGTATAAAAGTTTGGAGATCTAAAAATCCAAACTGAA
GCAGAGATGCAAGGAGTATTAAAATTTAGAGAGGTTTTGGACTAGAAGCT
AGGAGGTATTGTTGCACAGCTTTTGTTGAACAAGAGGTTTTCTTTCTCCT
TTTTCTAGCAATTAGCGCGAGAATTTTTCCAACTCAAACTTCAATATCAA
CGAATGAAAACGGCAATATTACATTAGAATGGTCTTTGAAACCTATGCAT
GGAGAAATTTCAGACTGGATATCAATTTTCCATCAATCTGATGAAGATTC
TCTCATTCGACCGTTATGGCACGATTCTACTGGTTTGACAAAATTTGGGG
AAAAGAAATTTCAAGATTCCTTTTCAGTGAATTACGCCAAGAATTCGAAG
AAAGTTTCAGCAACAATAACAAACGTGAAGGATTCAATGATTGTTTATTT
GACGGCTGTCTTCATGGATAAAAACGGGCAAATTGTCAGTGGACCTATTT
ATTCCAAGTTTAAAATTCGAGGTAACTCTAAATTCGATATTTAATCAATT
GAGCTCAGAATCCTTATTCGTGATATGCACCATTGCACGGACCCAACAGC
TGATTGGTTGTAAGTGAAGTAAAATCAGTCAAGACGACTCTGCAACCAAT
CGGCTGTTTGGTATGTGATATAATGTTGGAAGACATTGCAATAGTGCACA
ACATGAATTCGAAATAAGGTAGTGGAAGTCTTATCAAGAAGTCTCATCAA
GATCTGATATGACGGTTCTAGAGTAAAAAGACTTAGGACTAAGATTAAGA
CATTTATCACTATTCTTTCCCCACTCGCTTAGATTATCATGTGCTAATTT
GTAGTGTTTATTTTCATTTTCCTAGTTGGTTACATTCAATTGACAGACAA
ACCAATTTGTTATGGAGCACGAGACAAAACACCAGCTTCCTTTTCACTTA
CTCTTGATGGTACTCTCAAAGCAATCAAGTTACGACATATCTCTGGCAGT
GTGCATTGTAGTGTTGGGAAATTGAGGAACTATTGGGGCTGTGGATCGTG
CTGCACGGGCAGTTTGATGACAATTATTACAAATTCTTCAGACAAAGCTA
TTATTCCATTAACAGGAACCTACCTTAGTTATCCAGCAGCAAATTACATC
CCCAACTATGGTGGGATCCTTGCTCCTGAGATAGTTCTTCCGGTACCCCT
TACTTCTAGGAGCGTTGCCAAAGGTGCAGTGATGAAAATTTGGTACACAG
AAGACTTATATCATTCTACAGTGAGTGACAATGGTGGCACTCATTGTGTT
TTGGTTTTTGCTATGTATTCGTAAAAACATCATTTCAAATTTAATATACA
ATCATGGTCAAAATCTATTGAGAACTTAGCTTATTTCCTCGTTTTTCGAA
ATTTGGAGTTCGGGCGAGAAAGTCGCTTTTGGGCTAATTGATAAATTTAT
TCGAGTATTTAAATAGTTTTTTCCCTTTCGGGAGGGGTTTATAGACTTCC
AGGCTATAAACTGAGCCCTATTGAACCATTCTTGAACTTTTGGATCCTTA
GATCTTAAGCTCTTAAGTATTAAGTCTAGCGTTAAAACTCAGAGTTAAAA
CTCTACTACCTTTCCAACCTAATTTAGAGCGCTTCCAAATCGTTTGTGGT
TATAACATTTCGTAGGCATTTTCCTTTTTTCTCAAATATTACGACCATGA
TCGTAAGTTTTATTTTTTTAGATGGTTAAGGATATGTAACTTATGCAAAA
TTTATTTTTTTTAAACCGAAAGGCCTTGATAGACCTGGTGGGTGTGCTGC
TGCAAATTTTTTTTCCGTACATGGACGGAAGTATCATCGACGGTCGGGAG
TATCTCATCTTGACGGTCGGGAGTATCATCGACGGTCGGAAGTATCTCAT
CTTGAAGGTCAGGAGTATCTTAAACTTATCTGAAACCTTGAAATATCGAC
CCGACCGGGGTTCGAACCCACCAAATGAAAGAGTTTCTAATCAGAAACAC
AGCGCGCTATCAGTTGAGCCACACTCGCACAGCAGAAC Coding sequence (CDS) from alignment at sc0000106_pilon:58214..60851- >MSTRG.13377.1.p1 ID=MSTRG.13377.1.p1|Name=MSTRG.13377.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2682bp|location=Sequence derived from alignment at sc0000106_pilon:58214..60851- (Clytia hemisphaerica_ch_hm2_pilon)
TTGGTTACATTCAATTGACAGACAAACCAATTTGTTATGGAGCACGAGAC
AAAACACCAGCTTCCTTTTCACTTACTCTTGATGGTACTCTCAAAGCAAT
CAAGTTACGACATATCTCTGGCAGTGTGCATTGTAGTGTTGGGAAATTGA
GGAACTATTGGGGCTGTGGATCGTGCTGCACGGGCAGTTTGATGACAATT
ATTACAAATTCTTCAGACAAAGCTATTATTCCATTAACAGGAACCTACCT
TAGTTATCCAGCAGCAAATTACATCCCCAACTATGGTGGGATCCTTGCTC
CTGAGATAGTTCTTCCGGTACCCCTTACTTCTAGGAGCGTTGCCAAAGGT
GCAGTGATGAAAATTTGGTACACAGAAGACTTATATCATTCTACAGTGAG
TGACAATGGTGGCACTCATTGTGTTTTGGTTTTTGCTATGTATTCGTAAC
AATTAGCGCGAGAATTTTTCCAACTCAAACTTCAATATCAACGAATGAAA
ACGGCAATATTACATTAGAATGGTCTTTGAAACCTATGCATGGAGAAATT
TCAGACTGGATATCAATTTTCCATCAATCTGATGAAGATTCTCTCATTCG
ACCGTTATGGCACGATTCTACTGGTTTGACAAAATTTGGGGAAAAGAAAT
TTCAAGATTCCTTTTCAGTGAATTACGCCAAGAATTCGAAGAAAGTTTCA
GCAACAATAACAAACGTGAAGGATTCAATGATTGTTTATTTGACGGCTGT
CTTCATGGATAAAAACGGGCAAATTGTCAGTGGACCTATTTATTCCAAGT
TTAAAATTCGAGCATTTTGTTGATAGGAATATTCAGTCAAGAAAAAAGTC
ATCTCTCGTGAAGATGTGGTTTCTTTTTATGTTCATCCCTTATGTTGGTT
ACATTCAATTGACAGACAAACCAATTTGTTATGGAGCACGAGACAAAACA
CCAGCTTCCTTTTCACTTACTCTTGATGGTACTCTCAAAGCAATCAAGTT
ACGACATATCTCTGGCAGTGTGCATTGTAGTGTTGGGAAATTGAGGAACT
ATTGGGGCTGTGGATCGTGCTGCACGGGCAGTTTGATGACAATTATTACA
AATTCTTCAGACAAAGCTATTATTCCATTAACAGGAACCTACCTTAGTTA
TCCAGCAGCAAATTACATCCCCAACTATGGTGGGATCCTTGCTCCTGAGA
TAGTTCTTCCGGTACCCCTTACTTCTAGGAGCGTTGCCAAAGGTGCAGTG
ATGAAAATTTGGTACACAGAAGACTTATATCATTCTACAGTGAGTGACAA
TGGTGGCACTCATTGTGTTTTGGTTTTTGCTATGTATTCGTAACAATTAG
CGCGAGAATTTTTCCAACTCAAACTTCAATATCAACGAATGAAAACGGCA
ATATTACATTAGAATGGTCTTTGAAACCTATGCATGGAGAAATTTCAGAC
TGGATATCAATTTTCCATCAATCTGATGAAGATTCTCTCATTCGACCGTT
ATGGCACGATTCTACTGGTTTGACAAAATTTGGGGAAAAGAAATTTCAAG
ATTCCTTTTCAGTGAATTACGCCAAGAATTCGAAGAAAGTTTCAGCAACA
ATAACAAACGTGAAGGATTCAATGATTGTTTATTTGACGGCTGTCTTCAT
GGATAAAAACGGGCAAATTGTCAGTGGACCTATTTATTCCAAGTTTAAAA
TTCGAGCATTTTGTTGATAGGAATATTCAGTCAAGAAAAAAGTCATCTCT
CGTGAAGATGTGGTTTCTTTTTATGTTCATCCCTTATGTTGGTTACATTC
AATTGACAGACAAACCAATTTGTTATGGAGCACGAGACAAAACACCAGCT
TCCTTTTCACTTACTCTTGATGGTACTCTCAAAGCAATCAAGTTACGACA
TATCTCTGGCAGTGTGCATTGTAGTGTTGGGAAATTGAGGAACTATTGGG
GCTGTGGATCGTGCTGCACGGGCAGTTTGATGACAATTATTACAAATTCT
TCAGACAAAGCTATTATTCCATTAACAGGAACCTACCTTAGTTATCCAGC
AGCAAATTACATCCCCAACTATGGTGGGATCCTTGCTCCTGAGATAGTTC
TTCCGGTACCCCTTACTTCTAGGAGCGTTGCCAAAGGTGCAGTGATGAAA
ATTTGGTACACAGAAGACTTATATCATTCTACAGTGAGTGACAATGGTGG
CACTCATTGTGTTTTGGTTTTTGCTATGTATTCGTAACAATTAGCGCGAG
AATTTTTCCAACTCAAACTTCAATATCAACGAATGAAAACGGCAATATTA
CATTAGAATGGTCTTTGAAACCTATGCATGGAGAAATTTCAGACTGGATA
TCAATTTTCCATCAATCTGATGAAGATTCTCTCATTCGACCGTTATGGCA
CGATTCTACTGGTTTGACAAAATTTGGGGAAAAGAAATTTCAAGATTCCT
TTTCAGTGAATTACGCCAAGAATTCGAAGAAAGTTTCAGCAACAATAACA
AACGTGAAGGATTCAATGATTGTTTATTTGACGGCTGTCTTCATGGATAA
AAACGGGCAAATTGTCAGTGGACCTATTTATTCCAAGTTTAAAATTCGAG
CATTTTGTTGATAGGAATATTCAGTCAAGAAAAAAGTCATCTCTCGTGAA
GATGTGGTTTCTTTTTATGTTCATCCCTTATG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000106_pilon | genome | sc0000106_pilon:58214..60851 - |
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