MSTRG.1337.1.p1 (mRNA) -

Overview
NameMSTRG.1337.1.p1
Unique NameMSTRG.1337.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000006_pilon:1995571..1997443+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.1337.1.p1 ID=MSTRG.1337.1.p1|Name=MSTRG.1337.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1873bp|location=Sequence derived from alignment at sc0000006_pilon:1995571..1997443+ (Clytia hemisphaerica_ch_hm2_pilon)
tATAAATACACTGAAATTTAACTGGGTTAATTAATCCAGACTTCACTCTA GATTGCTGAAGAAGTTTTTCTTTCACCAACTGAAAGTGCATTGATAAGGT AAGACATTtcatttatcaattttcttaaCAAATCTTCCAATTTTCCAAGC CATAGGTAATCCATAGATAGCCATTCGTTTCGTTTGATACTCCTAATTct agatagatagatattttacgtggatagcccagtaatctaggacttttaga cagtctttcgattgttttcacggggtccacctCCAGCCGGcttggctatc tatgaactgaacggaacattggaaggagcggggattcgaactaCGAATCt ctggtttgagacgctgacgcctttgaccacttggccatcgctccatGGCC TACATAACAGAACTGTTGTAcaactgacttcaaatctaaaacAGTGCTCA ATATAGTGGTTTGCAGAACGGTATCATAAATACATGGAATTCCCgtgaaa gtaaaaagaaagtCAGTCTTGTTGTTAAGATAATTGGGTACAGTACTTAA TTCTTTGTGTAAAGCGTAAtctcataacataacataaCTATGAAAGTATA CTCACTTCTTTTTTCAGCAACCATGTTGAGAGTTTTGATAACCATTGCTT TACTTGGAGTTGCTTCCGCAGCTGTTTCAACCAAGATCGCCAACTGGTGG ACTACATTTGATCATGGTGGTTGGTCCAAATGTGCTGATGGCCATTTCCT GACTGGTATGTGGAGAAGTGCTCGTCAGATTGGAGATGAAAGAATCGGCA GAATCGAAGAAGGAGATTGTAAAAGTGCTGACAGTGCATATACCGGAGAT TGCAAACAAATGGATTGCTACAAGCTGAATATCTGGtcaattttcgacaa aaaaggTTGGGCAACATGCAAACCTGGCTACTTTATCCAATCCATCTTTT CCACCAAAGGAAAAAACCTTCACAACATCGAGGAATTCCAATGCTGTAAA CCAAGATCTAAGAAAGTCAAGCAAGGTCAATGCTACATCCAAAATGTTTG GCAATCCTTTGACAACAAAGGTTGGTCTAAATGCAAAGCTGGATATTACA TGCAAGGTATGTTCAGAAACAGCTGTGACAAATTGTATTGTCTTGAGGAA TTCAAATGCTGTAATATGGTCGCTACAGACTCGTCTGTCTCAACCAAGAT CGCCAACTGGTGGAGTACATTCGACCATGGTGGTTGGTCCCAATGTGCTG CTGGACATTTCCTGACTGGTATGTGGAGAAGTCCTCGTCAGATTTTCGAT GAAAGAATCGGCAGAATCGAACAAGGAGATTGTAAATCTGCACCAAAGAA TCTTGGATCTGGACAAGAATGCTACAAATTGAATATCTGGtcaattttcg acaaaaaaggTTGGGCAAATTGCAAACCTGGTTATTACATGCAGTCCATT TTCTCCACCAAGGGAAAGGGCCTTCACCACATCGAGGAATTCCAATGTTG CAGACCTAAAGGAGGGGTGACAGTTGATGGTCAATGCTACATCCAAAATG TTTGGAAATCCTTTGACAACAAAGGTTGGTCTAAATGCAAAGCTGGATAT TACATGCAAGGTATGTTCAGAAACAGCTGTGACAAATTGTATTGTATCGA AGAATTCAGATGCTGCAGCATGAAACAAAAATGTTGAGAGACATTCTGGA TAAtatagaatttctttttcattttcaatcttatAAGGCGTTAAGGGAAT GAGTATTTAGAATTTCAATAGTCGATTTGTAGATCATTTACCAAATATTT AATCTACTTGTACTTCACTATGAGCTTTTTTCTCACAATAGATTTACTGA CTTGcatttaaaaattacaaaaa

Coding sequence (CDS) from alignment at sc0000006_pilon:1995571..1997443+

>MSTRG.1337.1.p1 ID=MSTRG.1337.1.p1|Name=MSTRG.1337.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1065bp|location=Sequence derived from alignment at sc0000006_pilon:1995571..1997443+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGAGAGTTTTGATAACCATTGCTTTACTTGGAGTTGCTTCCGCAGC
TGTTTCAACCAAGATCGCCAACTGGTGGACTACATTTGATCATGGTGGTT
GGTCCAAATGTGCTGATGGCCATTTCCTGACTGGTATGTGGAGAAGTGCT
CGTCAGATTGGAGATGAAAGAATCGGCAGAATCGAAGAAGGAGATTGTAA
AAGTGCTGACAGTGCATATACCGGAGATTGCAAACAAATGGATTGCTACA
AGCTGAATATCTGGtcaattttcgacaaaaaaggTTGGGCAACATGCAAA
CCTGGCTACTTTATCCAATCCATCTTTTCCACCAAAGGAAAAAACCTTCA
CAACATCGAGGAATTCCAATGCTGTAAACCAAGATCTAAGAAAGTCAAGC
AAGGTCAATGCTACATCCAAAATGTTTGGCAATCCTTTGACAACAAAGGT
TGGTCTAAATGCAAAGCTGGATATTACATGCAAGGTATGTTCAGAAACAG
CTGTGACAAATTGTATTGTCTTGAGGAATTCAAATGCTGTAATATGGTCG
CTACAGACTCGTCTGTCTCAACCAAGATCGCCAACTGGTGGAGTACATTC
GACCATGGTGGTTGGTCCCAATGTGCTGCTGGACATTTCCTGACTGGTAT
GTGGAGAAGTCCTCGTCAGATTTTCGATGAAAGAATCGGCAGAATCGAAC
AAGGAGATTGTAAATCTGCACCAAAGAATCTTGGATCTGGACAAGAATGC
TACAAATTGAATATCTGGtcaattttcgacaaaaaaggTTGGGCAAATTG
CAAACCTGGTTATTACATGCAGTCCATTTTCTCCACCAAGGGAAAGGGCC
TTCACCACATCGAGGAATTCCAATGTTGCAGACCTAAAGGAGGGGTGACA
GTTGATGGTCAATGCTACATCCAAAATGTTTGGAAATCCTTTGACAACAA
AGGTTGGTCTAAATGCAAAGCTGGATATTACATGCAAGGTATGTTCAGAA
ACAGCTGTGACAAATTGTATTGTATCGAAGAATTCAGATGCTGCAGCATG
AAACAAAAATGTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.1337MSTRG.1337Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.1337.1.p1MSTRG.1337.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.1337.1.p1.exon1MSTRG.1337.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.1337.1.p1.exon2MSTRG.1337.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000006_pilongenomesc0000006_pilon:1995571..1997443 +