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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000105_pilon:735570..741154- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13354.5.p1 ID=MSTRG.13354.5.p1|Name=MSTRG.13354.5.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5585bp|location=Sequence derived from alignment at sc0000105_pilon:735570..741154- (Clytia hemisphaerica_ch_hm2_pilon)
CTAAAGAGAAATCGATAACACAGAAGCTTAATTTTGATTGGCTGCTCGAT
TTCATCCAATCAAAGAGATTTATGAAACCAGACGAAGCTCGGTTTCATCA
GCAGATCGATTTCAATTGAGCTAGATCTTACAAGAAAGTTTGCCACAAAC
AAATCTACCGGCTTTTGTACGTCAACGGAAATTGATCGCAATTCAAACCC
CAAATAATGAAGCTGATCTTTTTGACATTGCTTGTGTCCACCTTGGAAGT
GGTTTTGGTGGATGGTTATTTCAGTAACCTCAGCGAATTACATGGAAGGA
AAAGGAGCATGAGACAGGTAAGCTTTTATTTTTCCAATCTTCCTCATCGA
TAAACGATAAACTGAACTCATCTTTACTCCCGCAAGGTTGAAGGCGATCT
TAAAGCACTTTGCAAAAGAAAGTACGCAATCTTCAACGGAAGTATTATGA
ATACAGTACAGTATGTAATTTTAGATATGCTCTGAAAAGGAGACATTATC
TAAACTCAATGCAGTGTTTCTAAAGGTCTTAATTTGAAAATAAACACCTT
TGCACAGTATTTTTGTTAGCTAAGCCGTGTTTTACAAAGTGTTGAGTCAT
CGCTCAAGTTTCAGATTAAAAGTTTAGGTCAAATTTTGTTCATACTTTAA
TAAAGAAGTCGATCTCAGAGAAATTCTAATAGACAGAGAAATCGTTTGTT
TTAGAGTGCAAGAAATCACATTTTGTGTTTTATCTTAAAAACTTCTGATT
TAATGAGGATATAATTATGGTTTAGCCTTTGAACTCCTTCATAGGAGACC
TAAGGCCTAGACAAAACATATTTTGTAAGATGGGAAAGTCTTGATTTGTA
ATATTCAACTCAATATTGCATCATCACTGTATTATTCTGTTGCAGCTTCA
AGTCAACTATTATTACTGTGATACATTGCTATTGGGTTTTCTATGCTCCA
TATCCCTCTATATCTTATTCTTCTCGCTATAGTTCTTGTCTTATACTCCT
TGTGTTTTCACAAGCTTTAAAAGTAGATTAGTGTCGGATTTTCATTGACA
CTTATAACTTACTTTCTTCAATTAAAATTCTGTTGACCTATTTTGTAACA
TTTTCCCTGCTTCTGAATATCACTCCCTTTTTTATATTGTTGCCTCGTGT
TCGTGAGAGATAATCACCGAGTTGAAGCCACAGTTATTATGGTCGGAAAC
TTTTGAAATGAGTTGTCATTTCGGTTTATGCAAGGCACCGGGAGGTTCAA
AATTTCAATCAACTACTTCTTGTGTAAATCAGAAATATGTTGAGTATGGC
TTTCGATCTGCATTGTTATGTTATGAATTGTACCACCCCTATTTCACCGG
TACAACTTAGAACTTTCTGTTAATTTTCCAAGGAAACGTCGGTTGCATTG
AAATTTGAACAAGTTAGATTTTCATTTCTGCATGTTTGGATATTGGTTGT
TTTTTTTCAATCTGTCATTCCAACAAAAAATGTGAACATAACTTTTTCAT
AATGCTGTTACTTGTTGGTTGCGATAAGAATCGCCCTCCTTGAAACAATG
GTCCATAGTATCGACACATAGATAAAAAATAAACCCTTTCCCTTTTTTTA
TCGTCAGTTAAGGTGAGAAGCTACGAGACCTCTATCATTCTATAGAAATA
TTTGTCGAGACCACGCCCCTGATATAATCAGTGTTAGAATTGTGGTTAGG
GTTAGCTCCATCACGAAACATATTTCCTTTATTTGATTATCCTGTTCCTT
CCTTAGATATTCTTTTATTTATTCCCGTTTAGCCTGAGAAATTTATTATC
CTAATTTACAGGATATCAATTTTTAATGCAGCGTTTTTATATTTTATTTT
GTGAAGAGCTACTCCTGAGAATCATTCTAAACTGTTGGTATCATAGATCC
CTTTCCCCAAATCGACATGAGTTCAGGACTTGTTTGACAAAGTTTCTTCC
TTTTACGTGATTCCAAGGAATGATCTTAAGGGGATAATTTTACAAGATGT
AAAATAAAAACAATTGAATTCTTAGGCCCTCTTAGGGATAAAAAGTTGTT
CTACTTAACGAAAAATTATCCATTACTCACAACAAATTATGTGATCATAT
TCTCAATTCGAATCTTTTGGTCAAAACTGACCCTTTTGTTTTTAAACATT
TTTTGGGATTTTGATTGAAATAAGAGGCCGATCAGTGACCCATATTTACC
AACTTTTTGAGTAATGTAATATTTTCAAAGTCGTTTTTTATTCTTCCCTT
CATAGCTCAGTTTATAAAAACTTCTGGATTTTTAGGAGGTTGAATAGCTA
TAGGAAATGAAAAGCTTTCTTCCAAAATATACTTGAACTTTATTTTCAAA
AACGCCCCTGTCTCGGTGACTCGAAAAAAATAATTGAGATAAATGCTAAT
GGGGCTAATACCGGTGGGGATGAATAGTTTCTTATTCTTTTAATCTTATT
TTCAACAGAAATGGAATTAATAAACATCAAAGTTTTAATACCTCCTTAGA
CTGCCATGTCAGTAGGGTATCACGCGGAAAAGGTGAGCGTGGGAGTTAGG
GAAGCATAGGAAGAAAGTTGGCGGTGGCAATTGCTGAAAGCTACTCTGTT
CATCAGCAGCCTTTTACCAACTTTTTCTCGCTCTCCTACGCACCTATTTT
AACAAACACCCTCCGCCCTCAGACATTAACAGAATAGTTTATTAGTATAC
GCCTTCCTCAATGGGTAAAAAAAATTTTTCTAGTTATAGTCAGGCAGCTG
AGGTCACATAAAAAAGTGCAGTAGCTACTTAAACAGTTGTTTTCAATAGA
TATGACCTTTCTGAACAAAAAATCATCAACCGGAAAATATTTACCGGACG
CGTCCGGTAATTCGGTAACCAACATAGACATATTATATACCAATCGACGC
GTTTTTTGGCGTAGATTAAGAAAAAGGTCAGTAACTATGTCTGAAAATTT
GATAATAAAAAGTTAAAAGCTTCCGAAGTTTTGATGACGTCATATTTACA
CTTTCTTTAAGATCAATTTTCTCGAGTTAAGTTAGTTGAGAAATCATATA
TATCCACTTCAAAGTCTTCTATATCGATTTTTGAGAGCTTTCGAATGGCG
GTCTTAGATTTCGATTTTGATAAGTTTGATTTTTTGATTTTTTTTCGTCT
CGGACAGGTAAAATTGACGTTACCGACATAGAGGAAAATCGTTCTAACTT
TTTATAGCAAAATTTTCAGATATGGTTACGGACCATTTTCTTAACCTACG
TTAAAAAACGCTTCGATCGGTATAGTATATAATATGTTTATGTTGGTTCT
CAAAATTTTTTCAGTATGCCTATGGGCACGCATGACGTCACCAGGTTCTA
AAATATTACCGGACACGTCCGGTAATTAATTTCAACAACTCCGGTTGATG
GTTTCTAGATATCTAGGTTGTATATTTTCAATTAAAAGTGGTTTGGGATT
GTTCGCACCCCGTCCAATTTTTTTGTGACCTCAGCTGCCTGTCTATTAGG
AAGATTAGTTTCTCACAGGTGAAAGTTTTTAATTGCCAGTCTTTCCCACT
GTGTCTATAGGGGAATGACTTGTGTCGAAGATGTCATTATATAATATAGT
GTCGTCCAAATGGTAACCTAACACAATGTTGGTGCAAAGGTTAATCACTA
CTTATCAAGTTTTCACCATCATTGAGTCAGGCCCATTCTAACGAAACTTG
ACCCAGTAATATTTAATATTCAACTTTGATGTCAACAAAAAAAATTTTTT
TCGAAGGGTCACTGAGAGAGATGCTCCAAAGCGTTCACGACTCGTTGAGA
TTTTATATCCGAAGTTGGTTTTTTACGACGAAAAACTTACAGTTTTGAAG
CCGTGTATAAAAAAGAGAAAATACAATAGCTACTTCAAGTTTCAACTAGT
TCTAGATACCAGATTCCCTTTGAGAAAACAAAACACGTGCTTCTTATTTT
TTGTGCGTCTTCACAGGTCAGATTATGTGATCTTTTTCTTCAAGATAGAA
ACATTTTATGACTTTTTCAGGCAAAAATTAAAAATTCATCGGGAACAGGT
TTGACGATCAATCGAAGTTCTCAGAATAGCAGAAAAATTTATTACCTAAA
AAAGACAAGATCAACGAGTTCATTTTTATACCGAAAAAGGTTTGAACTAG
GTTATATAACTTTAGGAATATTCAGTTTCAATAAACACACGCCACAAGGT
CAAAGTGCCTCGATTCAAACAGTACTTTGTTGTGCGTAGGACGAAAGACT
TGATGCTTACGTCATCAAAATTACCGTTCCCCTTCTCTCTCTAAATCTTT
CCTATGGTAGAAAAACTTCCTTATCGATGAAGAGTTCGATACGAGCTTTT
ATTCGTGTATACGAAGAGATCTCGATCTATATTCTAGTAATCTCTATGTT
GAAGCCAGGGGTTTTCCGGCGTATTTTTATAAATAATAATATGGAGGAGG
GGGTCTTCTATTCTTCTTTAATTTATTTTCGTTCATTTGTTGATGTTATG
TTGCTGGATTAGGGTTAGTTTACTCCTTCTTGTGTAGAGGTTGAGATCTC
ATTGAAAGACAATTTAAATTCTTCCTTATTATGGTCAGAATGTTATGAAC
AAAAGAAAGAAAACGAAGTATAGGTCATAAAAAAGAAACAACAAGTCGTA
CAAATTATACGACAGACAAATTACATGCTAAGAAAAATTATTTGGAATTT
TAGATCTTGTTTTGAATAGAAGGAAAATTAGAAAAATGAAGTGTACAGTA
CTGTTGATAGCGATGTATTTCTCACAAATCAATGCTTACTTTCACCAACT
TAGTGGATCTTATGGTAAAAGAGAAGTCAAAAAATTGAAAGATTCAAATG
TAAGATTTTCAGCCGTGTAGTTTAGTTGTTTTTATAGCAATAGAAACCCT
TATTATTTCAAATATTTGATATTTTACTTTCAACATCACCATTTTTTTTG
TGCCCAATTATCTAGTAATAGTTTTCAATTTCACGGATTGATATTTTCAT
CCAATTTACGACCATATGTTTTCAACAAATTTTTAGCGCACATGTCTAAT
CCCGTGAATTGGAAATGGCACTGACACAGCATTTCTTTTGCTAATTGTTT
TTATTGGATTTCTTTCAGTTTTACGACCAATTAAGAAGAACGACCGTCAA
CAACCAGCGTGACGCCCAACTCGAAAATATCTGCCGTCAAATCACCGTCA
TATGTCAACAACGCTTGCCTAGCAACAGCGATGACATCATCAAACAACAT
GGTAGCGACCAAAACAATATGGTAGAAGAAATTATGGCAAACGATTACAA
TATTGATGACATCACTGGTAACGAATTTGTCTTGGCAAAAGTTCCAAAGT
CACTGAGGAGTAAAGCTAACAACAAAAGACTTATAAAGAAACGCTAATCG
GCTCCAATCCAAAGATTCTAACACTTGACAGACATGACATCTTAAATTTT
GAACCCTCTTAAAATATCAGCGTTTTTACTATTTTCGTTGTTGTAGAAAG
ATATTTTTCGATCATGTATTTAAACTTCTTTATCCTTTTCAATCTAATTC
AATTTGGTATTTGATGCGTGGGTCAAAATGGAGGC Coding sequence (CDS) from alignment at sc0000105_pilon:735570..741154- >MSTRG.13354.5.p1 ID=MSTRG.13354.5.p1|Name=MSTRG.13354.5.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=780bp|location=Sequence derived from alignment at sc0000105_pilon:735570..741154- (Clytia hemisphaerica_ch_hm2_pilon)
TTTTACGACCAATTAAGAAGAACGACCGTCAACAACCAGCGTGACGCCCA
ACTCGAAAATATCTGCCGTCAAATCACCGTCATATGTCAACAACGCTTGC
CTAGCAACAGCGATGACATCATCAAACAACATGGTAGCGACCAAAACAAT
ATGGTAGAAGAAATTATGGCAAACGATTACAATATTGATGACATCACTGG
TAACGAATTTGTCTTGGCAAAAGTTCCAAAGTCACTGAGGAGTAAAGCTA
ACAACAAAAGACTTATAAAGAAACGCTAAATGAAGCTGATCTTTTTGACA
TTGCTTGTGTCCACCTTGGAAGTGGTTTTGGTGGATGGTTATTTCAGTAA
CCTCAGCGAATTACATGGAAGGAAAAGGAGCATGAGACAGTTTTACGACC
AATTAAGAAGAACGACCGTCAACAACCAGCGTGACGCCCAACTCGAAAAT
ATCTGCCGTCAAATCACCGTCATATGTCAACAACGCTTGCCTAGCAACAG
CGATGACATCATCAAACAACATGGTAGCGACCAAAACAATATGGTAGAAG
AAATTATGGCAAACGATTACAATATTGATGACATCACTGGTAACGAATTT
GTCTTGGCAAAAGTTCCAAAGTCACTGAGGAGTAAAGCTAACAACAAAAG
ACTTATAAAGAAACGCTAAATGAAGCTGATCTTTTTGACATTGCTTGTGT
CCACCTTGGAAGTGGTTTTGGTGGATGGTTATTTCAGTAACCTCAGCGAA
TTACATGGAAGGAAAAGGAGCATGAGACAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000105_pilon | genome | sc0000105_pilon:735570..741154 - |
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