|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000105_pilon:706226..708643+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13353.1.p1 ID=MSTRG.13353.1.p1|Name=MSTRG.13353.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2418bp|location=Sequence derived from alignment at sc0000105_pilon:706226..708643+ (Clytia hemisphaerica_ch_hm2_pilon)
AGATGTATTCATTGATTATCTTGGTGGCGTGTTTGTTCGGGACAACGTCT
GCCAAACAGCTTCTGGTTCTTGCACCGCCCATTAAAGCTAATGAATACTA
CACTGAAAAATTCCTTGACGTCATCCCGTTTTACGTCGATTACGTAAACA
ACGTGACGGGAAAAGATGACGTCGTTGTCGTAGTTGATGAGGAGACGATG
TCGTATTATAAAGGAAAGATTGACGATTCGAAGTTGATTGAAGCACATGT
TGATGATCCTTGGCTAAGAGATGTCAGCCCTCCTATACCATCAAGTCAGG
TatgtgattttctgattttaacAAACTATTGTGATTAACAAACTTGTGTT
AAATCCAGGGAAAGATTGCacatagtctgaatcgcagacctctatagata
tattcCCTATACatctataagaaactcttttcgttAGAGGATGAACAAAA
GCCTAGATTGCTCAAAACAAatatcttgtcatttttttgggcattttttt
tcgaaaatcgggctccgtcacattttggtaatcaccattttgcacccttg
taccaaaaatcacaaaatcccTATAATTCAATCCCGAGGAAAGTTGGTAA
ctgacgaacggacgaacaaaggttaatttataggacctccaggtaggtcc
aaaaaccttCGTACTGAACTACATAAAAAATAATAGCTCTTACAAGAGAT
TGAAAGTTCACATTAGTATTCCTTTACCCTCAAACAACGACACCCTTTGG
TCTATACATACGCAGTTGGTGATGGGCCTTGTGATCTGTCATCATTTAAA
CATTAGAATCTATAGAATCTTGCATGACaacaaaatgaaatatttttcga
tTGTCTTTTCAGGTTCAGTTCACCTACATCGGTGGCGGAGGAAAATCAGA
GGCTAAAACCACTCAAGACATCTACGACAAATTCATCCACAGTCTAAACA
TCAAACCAAACAAAACGGACCTTTTGTTAGACGGTGGCAATCTGGTGAAC
AACAACGAGGACGGTGTCATCACGACCAAGAAATTCCTCACAGATAATGG
ACTGAACGAAGAGCAAGGGATTTCAGAATTACAACGACTTCTTGGTGTTC
AGAATGTATCCATTTTGACGCCGGATGAACCCACGTTAGCGCACGCGGAC
GGACAAGCAGCGTACGTTTGTAGGGATGCTATATACATGCAGAAACAGTT
GGAACCTAACAATACATTGTACAAGAACGAGTTGAAGAAAGGATGTCCTG
GCTGTCAAATTATTGAAGTCGACGGTAATTTTTAGGCTTTACAACATCTA
AAGTAAAGAAGTCCGAGGAAAGATTTTATACGAATAAAATTGATTTATAA
GCAACAGAAAATATACCGTTGAACCACTGAGCTTTTTCATTTCTCTATTA
TTATCTTTTTCAGCGTATATTCAATACGCTATATATTCAATATATTTCAG
GATTTTTCGACGATCGAGTTTACAAAGGAGGTTACGCATCTTCGTGTGGC
GTTTACGTCAACTGCGTGGTGACGGACGACTTCATTTACGTGCCTACGTA
AGTCTGACGTTAATtgggttttttgttttgtaggCGAACATTTTGGTCGT
AAAAAAGTCGTAACTAGGCATCTGGGAACTGGCTTTGAAATTTGAACTGA
ACCCTTACAATGACAAGGGCATTGTTTAACTTTCATTTATACGTTTTCTA
CACAGGTTCAACCACGAAAAAGACGCACAAGCTCTGTTCGAATTTCGTAA
CAACCCCTGCAACAAGACAGTCGTTCCTATAGACGCACGCGTTGTCTGCG
AGATGGGAGGTAGCCTGAGATGTTTGAGTTGGCAAACCAGTGGAACATGG
GCTAAACAAATCATCACACACGCTGCAAAAGAAAGTCACGCTTCAATGGT
TAGGGTTTCTCTCTGTTCGTTTGTAGTGGTGTTTTCAGCGTTATTGATAG
GATTTTAAAGTAAACTTCCCTCTTGAACATACTATCCGACTGAGGAACGT
ACGAAAGCTGCTATTTAAAGAACGTTGTACGAAAGCATAATATCTGTAGT
CAACGCAACGCAAAGTTTTTTGTCTCAGATGGAGATTACAGACTTTAAAC
AACAAATCGGACAATATTCTTCAGATTTTGCAGAATTTCGCCTCTTCCAT
CTGAAACGGAGGAGCTTTACACTGTAATATACAAGTGTTGCACATTTCTT
TCACAGATTTGATTTGACACGCAGATTTAGAACACTCAATGCAGCAAAAC
ACAAAGTGTTTGTTCAAAgacattttaatatttattatCCGGAGGAAAAC
TATTATTTTATTGCACTGTAAATACCGGGTgcagcagaaaaaactttgga
cgtttggcgagccactgaggccgaacaaagtcttgtttagactcaaaacc
acttttattagaaagagg Coding sequence (CDS) from alignment at sc0000105_pilon:706226..708643+ >MSTRG.13353.1.p1 ID=MSTRG.13353.1.p1|Name=MSTRG.13353.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4236bp|location=Sequence derived from alignment at sc0000105_pilon:706226..708643+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATTCATTGATTATCTTGGTGGCGTGTTTGTTCGGGACAACGTCTGC
CAAACAGCTTCTGGTTCTTGCACCGCCCATTAAAGCTAATGAATACTACA
CTGAAAAATTCCTTGACGTCATCCCGTTTTACGTCGATTACGTAAACAAC
GTGACGGGAAAAGATGACGTCGTTGTCGTAGTTGATGAGGAGACGATGTC
GTATTATAAAGGAAAGATTGACGATTCGAAGTTGATTGAAGCACATGTTG
ATGATCCTTGGCTAAGAGATGTCAGCCCTCCTATACCATCAAGTCAGGTT
CAGTTCACCTACATCGGTGGCGGAGGAAAATCAGAGGCTAAAACCACTCA
AGACATCTACGACAAATTCATCCACAGTCTAAACATCAAACCAAACAAAA
CGGACCTTTTGTTAGACGGTGGCAATCTGGTGAACAACAACGAGGACGGT
GTCATCACGACCAAGAAATTCCTCACAGATAATGGACTGAACGAAGAGCA
AGGGATTTCAGAATTACAACGACTTCTTGGTGTTCAGAATGTATCCATTT
TGACGCCGGATGAACCCACGTTAGCGCACGCGGACGGACAAGCAGCGTAC
GTTTGTAGGGATGCTATATACATGCAGAAACAGTTGGAACCTAACAATAC
ATTGTACAAGAACGAGTTGAAGAAAGGATGTCCTGGCTGTCAAATTATTG
AAGTCGACGGATTTTTCGACGATCGAGTTTACAAAGGAGGTTACGCATCT
TCGTGTGGCGTTTACGTCAACTGCGTGGTGACGGACGACTTCATTTACGT
GCCTACGTTCAACCACGAAAAAGACGCACAAGCTCTGTTCGAATTTCGTA
ACAACCCCTGCAACAAGACAGTCGTTCCTATAGACGCACGCGTTGTCTGC
GAGATGGGAGGTAGCCTGAGATGTTTGAGTTGGCAAACCAGTGGAACATG
GGCTAAACAAATCATCACACACGCTGCAAAAGAAAGTCACGCTTCAATGG
TTAGGGTTTCTCTCTGTTCGTTTGTAGTGGTGTTTTCAGCGTTATTGATA
GGATTTTAAATGTATTCATTGATTATCTTGGTGGCGTGTTTGTTCGGGAC
AACGTCTGCCAAACAGCTTCTGGTTCTTGCACCGCCCATTAAAGCTAATG
AATACTACACTGAAAAATTCCTTGACGTCATCCCGTTTTACGTCGATTAC
GTAAACAACGTGACGGGAAAAGATGACGTCGTTGTCGTAGTTGATGAGGA
GACGATGTCGTATTATAAAGGAAAGATTGACGATTCGAAGTTGATTGAAG
CACATGTTGATGATCCTTGGCTAAGAGATGTCAGCCCTCCTATACCATCA
AGTCAGGTTCAGTTCACCTACATCGGTGGCGGAGGAAAATCAGAGGCTAA
AACCACTCAAGACATCTACGACAAATTCATCCACAGTCTAAACATCAAAC
CAAACAAAACGGACCTTTTGTTAGACGGTGGCAATCTGGTGAACAACAAC
GAGGACGGTGTCATCACGACCAAGAAATTCCTCACAGATAATGGACTGAA
CGAAGAGCAAGGGATTTCAGAATTACAACGACTTCTTGGTGTTCAGAATG
TATCCATTTTGACGCCGGATGAACCCACGTTAGCGCACGCGGACGGACAA
GCAGCGTACGTTTGTAGGGATGCTATATACATGCAGAAACAGTTGGAACC
TAACAATACATTGTACAAGAACGAGTTGAAGAAAGGATGTCCTGGCTGTC
AAATTATTGAAGTCGACGGATTTTTCGACGATCGAGTTTACAAAGGAGGT
TACGCATCTTCGTGTGGCGTTTACGTCAACTGCGTGGTGACGGACGACTT
CATTTACGTGCCTACGTTCAACCACGAAAAAGACGCACAAGCTCTGTTCG
AATTTCGTAACAACCCCTGCAACAAGACAGTCGTTCCTATAGACGCACGC
GTTGTCTGCGAGATGGGAGGTAGCCTGAGATGTTTGAGTTGGCAAACCAG
TGGAACATGGGCTAAACAAATCATCACACACGCTGCAAAAGAAAGTCACG
CTTCAATGGTTAGGGTTTCTCTCTGTTCGTTTGTAGTGGTGTTTTCAGCG
TTATTGATAGGATTTTAAATGTATTCATTGATTATCTTGGTGGCGTGTTT
GTTCGGGACAACGTCTGCCAAACAGCTTCTGGTTCTTGCACCGCCCATTA
AAGCTAATGAATACTACACTGAAAAATTCCTTGACGTCATCCCGTTTTAC
GTCGATTACGTAAACAACGTGACGGGAAAAGATGACGTCGTTGTCGTAGT
TGATGAGGAGACGATGTCGTATTATAAAGGAAAGATTGACGATTCGAAGT
TGATTGAAGCACATGTTGATGATCCTTGGCTAAGAGATGTCAGCCCTCCT
ATACCATCAAGTCAGGTTCAGTTCACCTACATCGGTGGCGGAGGAAAATC
AGAGGCTAAAACCACTCAAGACATCTACGACAAATTCATCCACAGTCTAA
ACATCAAACCAAACAAAACGGACCTTTTGTTAGACGGTGGCAATCTGGTG
AACAACAACGAGGACGGTGTCATCACGACCAAGAAATTCCTCACAGATAA
TGGACTGAACGAAGAGCAAGGGATTTCAGAATTACAACGACTTCTTGGTG
TTCAGAATGTATCCATTTTGACGCCGGATGAACCCACGTTAGCGCACGCG
GACGGACAAGCAGCGTACGTTTGTAGGGATGCTATATACATGCAGAAACA
GTTGGAACCTAACAATACATTGTACAAGAACGAGTTGAAGAAAGGATGTC
CTGGCTGTCAAATTATTGAAGTCGACGGATTTTTCGACGATCGAGTTTAC
AAAGGAGGTTACGCATCTTCGTGTGGCGTTTACGTCAACTGCGTGGTGAC
GGACGACTTCATTTACGTGCCTACGTTCAACCACGAAAAAGACGCACAAG
CTCTGTTCGAATTTCGTAACAACCCCTGCAACAAGACAGTCGTTCCTATA
GACGCACGCGTTGTCTGCGAGATGGGAGGTAGCCTGAGATGTTTGAGTTG
GCAAACCAGTGGAACATGGGCTAAACAAATCATCACACACGCTGCAAAAG
AAAGTCACGCTTCAATGGTTAGGGTTTCTCTCTGTTCGTTTGTAGTGGTG
TTTTCAGCGTTATTGATAGGATTTTAAATGTATTCATTGATTATCTTGGT
GGCGTGTTTGTTCGGGACAACGTCTGCCAAACAGCTTCTGGTTCTTGCAC
CGCCCATTAAAGCTAATGAATACTACACTGAAAAATTCCTTGACGTCATC
CCGTTTTACGTCGATTACGTAAACAACGTGACGGGAAAAGATGACGTCGT
TGTCGTAGTTGATGAGGAGACGATGTCGTATTATAAAGGAAAGATTGACG
ATTCGAAGTTGATTGAAGCACATGTTGATGATCCTTGGCTAAGAGATGTC
AGCCCTCCTATACCATCAAGTCAGGTTCAGTTCACCTACATCGGTGGCGG
AGGAAAATCAGAGGCTAAAACCACTCAAGACATCTACGACAAATTCATCC
ACAGTCTAAACATCAAACCAAACAAAACGGACCTTTTGTTAGACGGTGGC
AATCTGGTGAACAACAACGAGGACGGTGTCATCACGACCAAGAAATTCCT
CACAGATAATGGACTGAACGAAGAGCAAGGGATTTCAGAATTACAACGAC
TTCTTGGTGTTCAGAATGTATCCATTTTGACGCCGGATGAACCCACGTTA
GCGCACGCGGACGGACAAGCAGCGTACGTTTGTAGGGATGCTATATACAT
GCAGAAACAGTTGGAACCTAACAATACATTGTACAAGAACGAGTTGAAGA
AAGGATGTCCTGGCTGTCAAATTATTGAAGTCGACGGATTTTTCGACGAT
CGAGTTTACAAAGGAGGTTACGCATCTTCGTGTGGCGTTTACGTCAACTG
CGTGGTGACGGACGACTTCATTTACGTGCCTACGTTCAACCACGAAAAAG
ACGCACAAGCTCTGTTCGAATTTCGTAACAACCCCTGCAACAAGACAGTC
GTTCCTATAGACGCACGCGTTGTCTGCGAGATGGGAGGTAGCCTGAGATG
TTTGAGTTGGCAAACCAGTGGAACATGGGCTAAACAAATCATCACACACG
CTGCAAAAGAAAGTCACGCTTCAATGGTTAGGGTTTCTCTCTGTTCGTTT
GTAGTGGTGTTTTCAGCGTTATTGATAGGATTTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000105_pilon | genome | sc0000105_pilon:706226..708643 + |
|
