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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000105_pilon:490677..493246+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13337.2.p1 ID=MSTRG.13337.2.p1|Name=MSTRG.13337.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2570bp|location=Sequence derived from alignment at sc0000105_pilon:490677..493246+ (Clytia hemisphaerica_ch_hm2_pilon)
aagaaaattgtacaaaatcagatttaatttttgtttgaaatttctttatt
tagttcagaaaaagatcaaaaatatgaaaatattgaagatgCCATTGAAC
TTCAAATATATCTGGACATCAAGCTACTTTGGTATTTGGAGAGATGAGAA
TACAATGGAGGTCTTAACAATTTCTCGCGAGATGTTTTCGTTTCCACCAC
GCATGTGCTATCTTCTGGGCGATCTTGTGAAATGCGCTCACGTTTATTGA
TGTACAGGCTAGCTTCGGTTGGTTGGTACGGAACACCGGCTAATTTGCAG
TTCTCAGCGATGCGTGCACGGTTTGACATATCTATCTTCCATGCTGGAGT
GTACAGTTTTGGAATGACTGGATGGTAAGCAGAGAATTTGGATGTTTTAT
CCTCCATGTTGGTGTGTTGTACGTTGTCCAAAAGAATTGAGTTTGCAGGT
TGgatttctttttggttttgttagttatttttgacgtcaaattttcttta
aataaaatattttgacgtcaattcttcAAGCTATTTTGAATACAAGACAT
CAGTTTTTTGAACGGAACTGTGAAATCTCGCTGTTAGACTCTATAATTTT
AGGACTTTGAAGACGATGGGGCCACTACCTTACGGGCCCGTGACCCGCCA
CGTCAACGCGTCAAATGGGCCGGATAACGAACGCGCAAAATTTTACGCCA
CAGAGTATTCAGTTAGCCATGGTAAATCTGGCTTCGTAGCGCGACCAGGG
AAACACACAGGGACTGGGTATCAAAGCAACTTTCGACCTGGCTTATTTTA
CAGCAGACGGCTCGATGAAATTGACAACCCTAAACTTGGGTAAGATAACA
TTTcctaattattttcaaactttttgcaTCACTTGGCAATTTTATCTACT
TATTTGCTATCTTGTATAGATATTTCAATAGTCCattagaaactttaatt
ttcaaaaaattaaaagtcttATTCTAGAGTTAGAATTGGGATAGGGAGTT
TTCTTGAGAGAGAAATATGCTTGCTAGTATGCTGAACTCTTCATCATTTT
AGAGATGAATTATTGAAGAATTACTCATCGAGCAACTCTTTCCAATTCCG
TAAATCTGCTGGTCCAAACGGGACCGACCAACTGCCCGGAAAACTTCACA
TGGCCAAGAACTCTTTCGTTCGTGATCTCCATCCAACGCTACCTTGCTCA
CGACAGATCGGGGAAACGTTGAAAATCAATGCCACCAATAAGTTCAATAA
ATCGCCAGCATCGCTTTTAAAACTACGGAGCAATGTAAGATCTGGGTTAC
TTGAAGACCATCCAAAAGCTTCTCTTGCTACAGAGAATACAACAGAGTTT
GAAGATCGTATCCACGAGCAAACACAACTCACATCTAAACCAGACATTGG
TCCCAAATGTGAATCAGGCTTCACCAATTCTTTAAGCAAGGAGCCAATCA
CATACCGGGAAGATGAATGTTATGGAACGCAGAATGTCTGTCGAAGACCA
ACAGGTTCTTTTCACATAAATTCTACTCTTTCCACATTGAAATCAAGTGA
AACAGTCGCTCTATAGTTATCTTCTACTTTGCCATAAGAGCCAGTGAAAC
TCAAACATTTTAGGTACTTTCGCATGATTATGAGTTTTGTCCACTCTACT
TAGTTAAGTCGCTGAGTCCAGTAATTCATAACCTCTCAAAAAGGCGCGGC
aatccttctttaaagattttttgatatAAATTTCGGTTTTAACAACTCTA
AACCTTTCCTCCTTTCAGGTATTTCAAATATGCGAAACTCATTCCAACCT
TTACACAGCGCTGACGGTAAAGAAGAATACATACTGTTATCTCAGCGAGC
CGCTAATGTCAACGGATATACAAAAAGCATGAAACCACGCGCTGAGTATG
CGCTACATAGACTAGATACCTACACTAAAGCGAACGATCTACAACCTACC
ATGCTACGCAGGCTACAAAAGAACGATAAAGGTGAATTCTTCAACGTCTT
GTATGCAGCACCCTTCCCAAGTATGAACAGTGCATCCTATACTCGCCATC
CGAAACCCAATTCGGGACCGGAAAAGCGAAGAATCGGACCAAAAGAAGAA
ACCGGTTTTACAGAGAACAACTGCAAGTTCATCCCGACTTTGGAAACAGG
GCAATCTTTGAAACGTTTCGATACTCACTACAAGGCACGTTTCTGTAACA
AGAATTTGAAACCAGTTCCCTTCACCGCAAATCCTGGCAAAACCGCGTTG
ATGGAAAAGGGGAATGGGTTTAGTAAGAGCACACGTGTTCATTCGCCCAT
TGGGAAACGAATTGACTTCACTCTGCCCACAATGCACCCTTATGTTGTTC
GAAGCAATGCATCACGGGATCCATCATATGTTAATTAAAGCATTGATTGA
AATGATTTACTTAGGGAAAGAAAGttgattaaaaatttaaacaaaaacaa
tgctTTGATAAATTCTTAAACTTAATGCTAAAATCGGCAAGATGTGACAC
TGGTTCAGGATCCCTTATTcgttttttttggacctacctggaggtcctat
aaattaacctttgtccgtcc Coding sequence (CDS) from alignment at sc0000105_pilon:490677..493246+ >MSTRG.13337.2.p1 ID=MSTRG.13337.2.p1|Name=MSTRG.13337.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5808bp|location=Sequence derived from alignment at sc0000105_pilon:490677..493246+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCGCTCACGTTTATTGATGTACAGGCTAGCTTCGGTTGGTTGGTACGG
AACACCGGCTAATTTGCAGTTCTCAGCGATGCGTGCACGGTTTGACATAT
CTATCTTCCATGCTGGAGTGTACAGTTTTGGAATGACTGGATGGACTTTG
AAGACGATGGGGCCACTACCTTACGGGCCCGTGACCCGCCACGTCAACGC
GTCAAATGGGCCGGATAACGAACGCGCAAAATTTTACGCCACAGAGTATT
CAGTTAGCCATGGTAAATCTGGCTTCGTAGCGCGACCAGGGAAACACACA
GGGACTGGGTATCAAAGCAACTTTCGACCTGGCTTATTTTACAGCAGACG
GCTCGATGAAATTGACAACCCTAAACTTGGAGATGAATTATTGAAGAATT
ACTCATCGAGCAACTCTTTCCAATTCCGTAAATCTGCTGGTCCAAACGGG
ACCGACCAACTGCCCGGAAAACTTCACATGGCCAAGAACTCTTTCGTTCG
TGATCTCCATCCAACGCTACCTTGCTCACGACAGATCGGGGAAACGTTGA
AAATCAATGCCACCAATAAGTTCAATAAATCGCCAGCATCGCTTTTAAAA
CTACGGAGCAATGTAAGATCTGGGTTACTTGAAGACCATCCAAAAGCTTC
TCTTGCTACAGAGAATACAACAGAGTTTGAAGATCGTATCCACGAGCAAA
CACAACTCACATCTAAACCAGACATTGGTCCCAAATGTGAATCAGGCTTC
ACCAATTCTTTAAGCAAGGAGCCAATCACATACCGGGAAGATGAATGTTA
TGGAACGCAGAATGTCTGTCGAAGACCAACAGGTATTTCAAATATGCGAA
ACTCATTCCAACCTTTACACAGCGCTGACGGTAAAGAAGAATACATACTG
TTATCTCAGCGAGCCGCTAATGTCAACGGATATACAAAAAGCATGAAACC
ACGCGCTGAGTATGCGCTACATAGACTAGATACCTACACTAAAGCGAACG
ATCTACAACCTACCATGCTACGCAGGCTACAAAAGAACGATAAAGGTGAA
TTCTTCAACGTCTTGTATGCAGCACCCTTCCCAAGTATGAACAGTGCATC
CTATACTCGCCATCCGAAACCCAATTCGGGACCGGAAAAGCGAAGAATCG
GACCAAAAGAAGAAACCGGTTTTACAGAGAACAACTGCAAGTTCATCCCG
ACTTTGGAAACAGGGCAATCTTTGAAACGTTTCGATACTCACTACAAGGC
ACGTTTCTGTAACAAGAATTTGAAACCAGTTCCCTTCACCGCAAATCCTG
GCAAAACCGCGTTGATGGAAAAGGGGAATGGGTTTAGTAAGAGCACACGT
GTTCATTCGCCCATTGGGAAACGAATTGACTTCACTCTGCCCACAATGCA
CCCTTATGTTGTTCGAAGCAATGCATCACGGGATCCATCATATGTTAATT
AAATGCGCTCACGTTTATTGATGTACAGGCTAGCTTCGGTTGGTTGGTAC
GGAACACCGGCTAATTTGCAGTTCTCAGCGATGCGTGCACGGTTTGACAT
ATCTATCTTCCATGCTGGAGTGTACAGTTTTGGAATGACTGGATGGACTT
TGAAGACGATGGGGCCACTACCTTACGGGCCCGTGACCCGCCACGTCAAC
GCGTCAAATGGGCCGGATAACGAACGCGCAAAATTTTACGCCACAGAGTA
TTCAGTTAGCCATGGTAAATCTGGCTTCGTAGCGCGACCAGGGAAACACA
CAGGGACTGGGTATCAAAGCAACTTTCGACCTGGCTTATTTTACAGCAGA
CGGCTCGATGAAATTGACAACCCTAAACTTGGAGATGAATTATTGAAGAA
TTACTCATCGAGCAACTCTTTCCAATTCCGTAAATCTGCTGGTCCAAACG
GGACCGACCAACTGCCCGGAAAACTTCACATGGCCAAGAACTCTTTCGTT
CGTGATCTCCATCCAACGCTACCTTGCTCACGACAGATCGGGGAAACGTT
GAAAATCAATGCCACCAATAAGTTCAATAAATCGCCAGCATCGCTTTTAA
AACTACGGAGCAATGTAAGATCTGGGTTACTTGAAGACCATCCAAAAGCT
TCTCTTGCTACAGAGAATACAACAGAGTTTGAAGATCGTATCCACGAGCA
AACACAACTCACATCTAAACCAGACATTGGTCCCAAATGTGAATCAGGCT
TCACCAATTCTTTAAGCAAGGAGCCAATCACATACCGGGAAGATGAATGT
TATGGAACGCAGAATGTCTGTCGAAGACCAACAGGTATTTCAAATATGCG
AAACTCATTCCAACCTTTACACAGCGCTGACGGTAAAGAAGAATACATAC
TGTTATCTCAGCGAGCCGCTAATGTCAACGGATATACAAAAAGCATGAAA
CCACGCGCTGAGTATGCGCTACATAGACTAGATACCTACACTAAAGCGAA
CGATCTACAACCTACCATGCTACGCAGGCTACAAAAGAACGATAAAGGTG
AATTCTTCAACGTCTTGTATGCAGCACCCTTCCCAAGTATGAACAGTGCA
TCCTATACTCGCCATCCGAAACCCAATTCGGGACCGGAAAAGCGAAGAAT
CGGACCAAAAGAAGAAACCGGTTTTACAGAGAACAACTGCAAGTTCATCC
CGACTTTGGAAACAGGGCAATCTTTGAAACGTTTCGATACTCACTACAAG
GCACGTTTCTGTAACAAGAATTTGAAACCAGTTCCCTTCACCGCAAATCC
TGGCAAAACCGCGTTGATGGAAAAGGGGAATGGGTTTAGTAAGAGCACAC
GTGTTCATTCGCCCATTGGGAAACGAATTGACTTCACTCTGCCCACAATG
CACCCTTATGTTGTTCGAAGCAATGCATCACGGGATCCATCATATGTTAA
TTAAATGCGCTCACGTTTATTGATGTACAGGCTAGCTTCGGTTGGTTGGT
ACGGAACACCGGCTAATTTGCAGTTCTCAGCGATGCGTGCACGGTTTGAC
ATATCTATCTTCCATGCTGGAGTGTACAGTTTTGGAATGACTGGATGGAC
TTTGAAGACGATGGGGCCACTACCTTACGGGCCCGTGACCCGCCACGTCA
ACGCGTCAAATGGGCCGGATAACGAACGCGCAAAATTTTACGCCACAGAG
TATTCAGTTAGCCATGGTAAATCTGGCTTCGTAGCGCGACCAGGGAAACA
CACAGGGACTGGGTATCAAAGCAACTTTCGACCTGGCTTATTTTACAGCA
GACGGCTCGATGAAATTGACAACCCTAAACTTGGAGATGAATTATTGAAG
AATTACTCATCGAGCAACTCTTTCCAATTCCGTAAATCTGCTGGTCCAAA
CGGGACCGACCAACTGCCCGGAAAACTTCACATGGCCAAGAACTCTTTCG
TTCGTGATCTCCATCCAACGCTACCTTGCTCACGACAGATCGGGGAAACG
TTGAAAATCAATGCCACCAATAAGTTCAATAAATCGCCAGCATCGCTTTT
AAAACTACGGAGCAATGTAAGATCTGGGTTACTTGAAGACCATCCAAAAG
CTTCTCTTGCTACAGAGAATACAACAGAGTTTGAAGATCGTATCCACGAG
CAAACACAACTCACATCTAAACCAGACATTGGTCCCAAATGTGAATCAGG
CTTCACCAATTCTTTAAGCAAGGAGCCAATCACATACCGGGAAGATGAAT
GTTATGGAACGCAGAATGTCTGTCGAAGACCAACAGGTATTTCAAATATG
CGAAACTCATTCCAACCTTTACACAGCGCTGACGGTAAAGAAGAATACAT
ACTGTTATCTCAGCGAGCCGCTAATGTCAACGGATATACAAAAAGCATGA
AACCACGCGCTGAGTATGCGCTACATAGACTAGATACCTACACTAAAGCG
AACGATCTACAACCTACCATGCTACGCAGGCTACAAAAGAACGATAAAGG
TGAATTCTTCAACGTCTTGTATGCAGCACCCTTCCCAAGTATGAACAGTG
CATCCTATACTCGCCATCCGAAACCCAATTCGGGACCGGAAAAGCGAAGA
ATCGGACCAAAAGAAGAAACCGGTTTTACAGAGAACAACTGCAAGTTCAT
CCCGACTTTGGAAACAGGGCAATCTTTGAAACGTTTCGATACTCACTACA
AGGCACGTTTCTGTAACAAGAATTTGAAACCAGTTCCCTTCACCGCAAAT
CCTGGCAAAACCGCGTTGATGGAAAAGGGGAATGGGTTTAGTAAGAGCAC
ACGTGTTCATTCGCCCATTGGGAAACGAATTGACTTCACTCTGCCCACAA
TGCACCCTTATGTTGTTCGAAGCAATGCATCACGGGATCCATCATATGTT
AATTAAATGCGCTCACGTTTATTGATGTACAGGCTAGCTTCGGTTGGTTG
GTACGGAACACCGGCTAATTTGCAGTTCTCAGCGATGCGTGCACGGTTTG
ACATATCTATCTTCCATGCTGGAGTGTACAGTTTTGGAATGACTGGATGG
ACTTTGAAGACGATGGGGCCACTACCTTACGGGCCCGTGACCCGCCACGT
CAACGCGTCAAATGGGCCGGATAACGAACGCGCAAAATTTTACGCCACAG
AGTATTCAGTTAGCCATGGTAAATCTGGCTTCGTAGCGCGACCAGGGAAA
CACACAGGGACTGGGTATCAAAGCAACTTTCGACCTGGCTTATTTTACAG
CAGACGGCTCGATGAAATTGACAACCCTAAACTTGGAGATGAATTATTGA
AGAATTACTCATCGAGCAACTCTTTCCAATTCCGTAAATCTGCTGGTCCA
AACGGGACCGACCAACTGCCCGGAAAACTTCACATGGCCAAGAACTCTTT
CGTTCGTGATCTCCATCCAACGCTACCTTGCTCACGACAGATCGGGGAAA
CGTTGAAAATCAATGCCACCAATAAGTTCAATAAATCGCCAGCATCGCTT
TTAAAACTACGGAGCAATGTAAGATCTGGGTTACTTGAAGACCATCCAAA
AGCTTCTCTTGCTACAGAGAATACAACAGAGTTTGAAGATCGTATCCACG
AGCAAACACAACTCACATCTAAACCAGACATTGGTCCCAAATGTGAATCA
GGCTTCACCAATTCTTTAAGCAAGGAGCCAATCACATACCGGGAAGATGA
ATGTTATGGAACGCAGAATGTCTGTCGAAGACCAACAGGTATTTCAAATA
TGCGAAACTCATTCCAACCTTTACACAGCGCTGACGGTAAAGAAGAATAC
ATACTGTTATCTCAGCGAGCCGCTAATGTCAACGGATATACAAAAAGCAT
GAAACCACGCGCTGAGTATGCGCTACATAGACTAGATACCTACACTAAAG
CGAACGATCTACAACCTACCATGCTACGCAGGCTACAAAAGAACGATAAA
GGTGAATTCTTCAACGTCTTGTATGCAGCACCCTTCCCAAGTATGAACAG
TGCATCCTATACTCGCCATCCGAAACCCAATTCGGGACCGGAAAAGCGAA
GAATCGGACCAAAAGAAGAAACCGGTTTTACAGAGAACAACTGCAAGTTC
ATCCCGACTTTGGAAACAGGGCAATCTTTGAAACGTTTCGATACTCACTA
CAAGGCACGTTTCTGTAACAAGAATTTGAAACCAGTTCCCTTCACCGCAA
ATCCTGGCAAAACCGCGTTGATGGAAAAGGGGAATGGGTTTAGTAAGAGC
ACACGTGTTCATTCGCCCATTGGGAAACGAATTGACTTCACTCTGCCCAC
AATGCACCCTTATGTTGTTCGAAGCAATGCATCACGGGATCCATCATATG
TTAATTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000105_pilon | genome | sc0000105_pilon:490677..493246 + |
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