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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000105_pilon:490677..493246+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13337.1.p1 ID=MSTRG.13337.1.p1|Name=MSTRG.13337.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2570bp|location=Sequence derived from alignment at sc0000105_pilon:490677..493246+ (Clytia hemisphaerica_ch_hm2_pilon)
aagaaaattgtacaaaatcagatttaatttttgtttgaaatttctttatt
tagttcagaaaaagatcaaaaatatgaaaatattgaagatgCCATTGAAC
TTCAAATATATCTGGACATCAAGCTACTTTGGTATTTGGAGAGATGAGAA
TACAATGGAGGTCTTAACAATTTCTCGCGAGATGTTTTCGTTTCCACCAC
GCATGTGCTATCTTCTGGGCGATCTTGTGAAATGCGCTCACGTTTATTGA
TGTACAGGCTAGCTTCGGTTGGTTGGTACGGAACACCGGCTAATTTGCAG
TTCTCAGCGATGCGTGCACGGTTTGACATATCTATCTTCCATGCTGGAGT
GTACAGTTTTGGAATGACTGGATGGTAAGCAGAGAATTTGGATGTTTTAT
CCTCCATGTTGGTGTGTTGTACGTTGTCCAAAAGAATTGAGTTTGCAGGT
TGgatttctttttggttttgttagttatttttgacgtcaaattttcttta
aataaaatattttgacgtcaattcttcAAGCTATTTTGAATACAAGACAT
CAGTTTTTTGAACGGAACTGTGAAATCTCGCTGTTAGACTCTATAATTTT
AGGACTTTGAAGACGATGGGGCCACTACCTTACGGGCCCGTGACCCGCCA
CGTCAACGCGTCAAATGGGCCGGATAACGAACGCGCAAAATTTTACGCCA
CAGAGTATTCAGTTAGCCATGGTAAATCTGGCTTCGTAGCGCGACCAGGG
AAACACACAGGGACTGGGTATCAAAGCAACTTTCGACCTGGCTTATTTTA
CAGCAGACGGCTCGATGAAATTGACAACCCTAAACTTGGGTAAGATAACA
TTTcctaattattttcaaactttttgcaTCACTTGGCAATTTTATCTACT
TATTTGCTATCTTGTATAGATATTTCAATAGTCCattagaaactttaatt
ttcaaaaaattaaaagtcttATTCTAGAGTTAGAATTGGGATAGGGAGTT
TTCTTGAGAGAGAAATATGCTTGCTAGTATGCTGAACTCTTCATCATTTT
AGAGATGAATTATTGAAGAATTACTCATCGAGCAACTCTTTCCAATTCCG
TAAATCTGCTGGTCCAAACGGGACCGACCAACTGCCCGGAAAACTTCACA
TGGCCAAGAACTCTTTCGTTCGTGATCTCCATCCAACGCTACCTTGCTCA
CGACAGATCGGGGAAACGTTGAAAATCAATGCCACCAATAAGTTCAATAA
ATCGCCAGCATCGCTTTTAAAACTACGGAGCAATGTAAGATCTGGGTTAC
TTGAAGACCATCCAAAAGCTTCTCTTGCTACAGAGAATACAACAGAGTTT
GAAGATCGTATCCACGAGCAAACACAACTCACATCTAAACCAGACATTGG
TCCCAAATGTGAATCAGGCTTCACCAATTCTTTAAGCAAGGAGCCAATCA
CATACCGGGAAGATGAATGTTATGGAACGCAGAATGTCTGTCGAAGACCA
ACAGGTTCTTTTCACATAAATTCTACTCTTTCCACATTGAAATCAAGTGA
AACAGTCGCTCTATAGTTATCTTCTACTTTGCCATAAGAGCCAGTGAAAC
TCAAACATTTTAGGTACTTTCGCATGATTATGAGTTTTGTCCACTCTACT
TAGTTAAGTCGCTGAGTCCAGTAATTCATAACCTCTCAAAAAGGCGCGGC
aatccttctttaaagattttttgatatAAATTTCGGTTTTAACAACTCTA
AACCTTTCCTCCTTTCAGGTATTTCAAATATGCGAAACTCATTCCAACCT
TTACACAGCGCTGACGGTAAAGAAGAATACATACTGTTATCTCAGCGAGC
CGCTAATGTCAACGGATATACAAAAAGCATGAAACCACGCGCTGAGTATG
CGCTACATAGACTAGATACCTACACTAAAGCGAACGATCTACAACCTACC
ATGCTACGCAGGCTACAAAAGAACGATAAAGGTGAATTCTTCAACGTCTT
GTATGCAGCACCCTTCCCAAGTATGAACAGTGCATCCTATACTCGCCATC
CGAAACCCAATTCGGGACCGGAAAAGCGAAGAATCGGACCAAAAGAAGAA
ACCGGTTTTACAGAGAACAACTGCAAGTTCATCCCGACTTTGGAAACAGG
GCAATCTTTGAAACGTTTCGATACTCACTACAAGGCACGTTTCTGTAACA
AGAATTTGAAACCAGTTCCCTTCACCGCAAATCCTGGCAAAACCGCGTTG
ATGGAAAAGGGGAATGGGTTTAGTAAGAGCACACGTGTTCATTCGCCCAT
TGGGAAACGAATTGACTTCACTCTGCCCACAATGCACCCTTATGTTGTTC
GAAGCAATGCATCACGGGATCCATCATATGTTAATTAAAGCATTGATTGA
AATGATTTACTTAGGGAAAGAAAGttgattaaaaatttaaacaaaaacaa
tgctTTGATAAATTCTTAAACTTAATGCTAAAATCGGCAAGATGTGACAC
TGGTTCAGGATCCCTTATTcgttttttttggacctacctggaggtcctat
aaattaacctttgtccgtcc Coding sequence (CDS) from alignment at sc0000105_pilon:490677..493246+ >MSTRG.13337.1.p1 ID=MSTRG.13337.1.p1|Name=MSTRG.13337.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3888bp|location=Sequence derived from alignment at sc0000105_pilon:490677..493246+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGGCCACTACCTTACGGGCCCGTGACCCGCCACGTCAACGCGTCAAA
TGGGCCGGATAACGAACGCGCAAAATTTTACGCCACAGAGTATTCAGTTA
GCCATGGTAAATCTGGCTTCGTAGCGCGACCAGGGAAACACACAGGGACT
GGGTATCAAAGCAACTTTCGACCTGGCTTATTTTACAGCAGACGGCTCGA
TGAAATTGACAACCCTAAACTTGGAGATGAATTATTGAAGAATTACTCAT
CGAGCAACTCTTTCCAATTCCGTAAATCTGCTGGTCCAAACGGGACCGAC
CAACTGCCCGGAAAACTTCACATGGCCAAGAACTCTTTCGTTCGTGATCT
CCATCCAACGCTACCTTGCTCACGACAGATCGGGGAAACGTTGAAAATCA
ATGCCACCAATAAGTTCAATAAATCGCCAGCATCGCTTTTAAAACTACGG
AGCAATGTAAGATCTGGGTTACTTGAAGACCATCCAAAAGCTTCTCTTGC
TACAGAGAATACAACAGAGTTTGAAGATCGTATCCACGAGCAAACACAAC
TCACATCTAAACCAGACATTGGTCCCAAATGTGAATCAGGCTTCACCAAT
TCTTTAAGCAAGGAGCCAATCACATACCGGGAAGATGAATGTTATGGAAC
GCAGAATGTCTGTCGAAGACCAACAGGTATTTCAAATATGCGAAACTCAT
TCCAACCTTTACACAGCGCTGACGGTAAAGAAGAATACATACTGTTATCT
CAGCGAGCCGCTAATGTCAACGGATATACAAAAAGCATGAAACCACGCGC
TGAGTATGCGCTACATAGACTAGATACCTACACTAAAGCGAACGATCTAC
AACCTACCATGCTACGCAGGCTACAAAAGAACGATAAAGGTGAATTCTTC
AACGTCTTGTATGCAGCACCCTTCCCAAGTATGAACAGTGCATCCTATAC
TCGCCATCCGAAACCCAATTCGGGACCGGAAAAGCGAAGAATCGGACCAA
AAGAAGAAACCGGTTTTACAGAGAACAACTGCAAGTTCATCCCGACTTTG
GAAACAGGGCAATCTTTGAAACGTTTCGATACTCACTACAAGGCACGTTT
CTGTAACAAGAATTTGAAACCAGTTCCCTTCACCGCAAATCCTGGCAAAA
CCGCGTTGATGGAAAAGGGGAATGGGTTTAGTAAGAGCACACGTGTTCAT
TCGCCCATTGGGAAACGAATTGACTTCACTCTGCCCACAATGCACCCTTA
TGTTGTTCGAAGCAATGCATCACGGGATCCATCATATGTTAATTAAATGG
GGCCACTACCTTACGGGCCCGTGACCCGCCACGTCAACGCGTCAAATGGG
CCGGATAACGAACGCGCAAAATTTTACGCCACAGAGTATTCAGTTAGCCA
TGGTAAATCTGGCTTCGTAGCGCGACCAGGGAAACACACAGGGACTGGGT
ATCAAAGCAACTTTCGACCTGGCTTATTTTACAGCAGACGGCTCGATGAA
ATTGACAACCCTAAACTTGGAGATGAATTATTGAAGAATTACTCATCGAG
CAACTCTTTCCAATTCCGTAAATCTGCTGGTCCAAACGGGACCGACCAAC
TGCCCGGAAAACTTCACATGGCCAAGAACTCTTTCGTTCGTGATCTCCAT
CCAACGCTACCTTGCTCACGACAGATCGGGGAAACGTTGAAAATCAATGC
CACCAATAAGTTCAATAAATCGCCAGCATCGCTTTTAAAACTACGGAGCA
ATGTAAGATCTGGGTTACTTGAAGACCATCCAAAAGCTTCTCTTGCTACA
GAGAATACAACAGAGTTTGAAGATCGTATCCACGAGCAAACACAACTCAC
ATCTAAACCAGACATTGGTCCCAAATGTGAATCAGGCTTCACCAATTCTT
TAAGCAAGGAGCCAATCACATACCGGGAAGATGAATGTTATGGAACGCAG
AATGTCTGTCGAAGACCAACAGGTATTTCAAATATGCGAAACTCATTCCA
ACCTTTACACAGCGCTGACGGTAAAGAAGAATACATACTGTTATCTCAGC
GAGCCGCTAATGTCAACGGATATACAAAAAGCATGAAACCACGCGCTGAG
TATGCGCTACATAGACTAGATACCTACACTAAAGCGAACGATCTACAACC
TACCATGCTACGCAGGCTACAAAAGAACGATAAAGGTGAATTCTTCAACG
TCTTGTATGCAGCACCCTTCCCAAGTATGAACAGTGCATCCTATACTCGC
CATCCGAAACCCAATTCGGGACCGGAAAAGCGAAGAATCGGACCAAAAGA
AGAAACCGGTTTTACAGAGAACAACTGCAAGTTCATCCCGACTTTGGAAA
CAGGGCAATCTTTGAAACGTTTCGATACTCACTACAAGGCACGTTTCTGT
AACAAGAATTTGAAACCAGTTCCCTTCACCGCAAATCCTGGCAAAACCGC
GTTGATGGAAAAGGGGAATGGGTTTAGTAAGAGCACACGTGTTCATTCGC
CCATTGGGAAACGAATTGACTTCACTCTGCCCACAATGCACCCTTATGTT
GTTCGAAGCAATGCATCACGGGATCCATCATATGTTAATTAAATGGGGCC
ACTACCTTACGGGCCCGTGACCCGCCACGTCAACGCGTCAAATGGGCCGG
ATAACGAACGCGCAAAATTTTACGCCACAGAGTATTCAGTTAGCCATGGT
AAATCTGGCTTCGTAGCGCGACCAGGGAAACACACAGGGACTGGGTATCA
AAGCAACTTTCGACCTGGCTTATTTTACAGCAGACGGCTCGATGAAATTG
ACAACCCTAAACTTGGAGATGAATTATTGAAGAATTACTCATCGAGCAAC
TCTTTCCAATTCCGTAAATCTGCTGGTCCAAACGGGACCGACCAACTGCC
CGGAAAACTTCACATGGCCAAGAACTCTTTCGTTCGTGATCTCCATCCAA
CGCTACCTTGCTCACGACAGATCGGGGAAACGTTGAAAATCAATGCCACC
AATAAGTTCAATAAATCGCCAGCATCGCTTTTAAAACTACGGAGCAATGT
AAGATCTGGGTTACTTGAAGACCATCCAAAAGCTTCTCTTGCTACAGAGA
ATACAACAGAGTTTGAAGATCGTATCCACGAGCAAACACAACTCACATCT
AAACCAGACATTGGTCCCAAATGTGAATCAGGCTTCACCAATTCTTTAAG
CAAGGAGCCAATCACATACCGGGAAGATGAATGTTATGGAACGCAGAATG
TCTGTCGAAGACCAACAGGTATTTCAAATATGCGAAACTCATTCCAACCT
TTACACAGCGCTGACGGTAAAGAAGAATACATACTGTTATCTCAGCGAGC
CGCTAATGTCAACGGATATACAAAAAGCATGAAACCACGCGCTGAGTATG
CGCTACATAGACTAGATACCTACACTAAAGCGAACGATCTACAACCTACC
ATGCTACGCAGGCTACAAAAGAACGATAAAGGTGAATTCTTCAACGTCTT
GTATGCAGCACCCTTCCCAAGTATGAACAGTGCATCCTATACTCGCCATC
CGAAACCCAATTCGGGACCGGAAAAGCGAAGAATCGGACCAAAAGAAGAA
ACCGGTTTTACAGAGAACAACTGCAAGTTCATCCCGACTTTGGAAACAGG
GCAATCTTTGAAACGTTTCGATACTCACTACAAGGCACGTTTCTGTAACA
AGAATTTGAAACCAGTTCCCTTCACCGCAAATCCTGGCAAAACCGCGTTG
ATGGAAAAGGGGAATGGGTTTAGTAAGAGCACACGTGTTCATTCGCCCAT
TGGGAAACGAATTGACTTCACTCTGCCCACAATGCACCCTTATGTTGTTC
GAAGCAATGCATCACGGGATCCATCATATGTTAATTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000105_pilon | genome | sc0000105_pilon:490677..493246 + |
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