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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000105_pilon:487697..490510+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13336.2.p2 ID=MSTRG.13336.2.p2|Name=MSTRG.13336.2.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2814bp|location=Sequence derived from alignment at sc0000105_pilon:487697..490510+ (Clytia hemisphaerica_ch_hm2_pilon)
cttaaaaaaaacaaagcataACAATGAGCCGACAGCAAATAGGTAAACCA
AATAAGCATGTCAATGAAAGCTATGGTGCAGGAAACAATATCATGAAGTT
TTATATCACAGAATATTCAAGTCGTCTTGGTATAGACGATTTCACTCCTC
AAAAAGGAAGTTGTGAGGGAACTGGCTACAAAAGCAACTTTCGCCCAGGC
GTTTATTACACAAGAAAACTTGATGAGCTAGATAATCCTACAATGGGGTA
ATAACACCTTTTGTCCAGTAGTTTATAGTTGAAATTGAGTTGAATTTATC
TTAAAACCTACTTAAAAACTACGTTTTTACTAACGTAAATTTTTAACATT
AACTTTATCATTTGCCAAAAATGAAGCACAATAGCTTAGAAAGTCTGTCA
AGGAAAATAAAATCCTGCTTTTTAAAATATGAAGGCATAATCCACCTATT
TCAGCTTCTGAAAGATTGATAATgatccaaattttttactttaggAAAAT
TGTTGACAAGAATTACAAATCGTTGACTCATAAAGATTACCAACCATCAA
GAGGACACAGTGGAAAAGAACCTTTGCCCCTCTCTACTCAAACTGCTTCA
ACAGGGTTCTCTAAAGAACACCAAACAGTCCCAACTGAGCGAGAAGCTTA
TGCTATGTTTCCTAATCTGGCCATGTCAAGCTACAAAGAGAAAACACCTC
TACTTCACactttaaaaaacaaagatCCCATAGCAGCTGAAAATGCCAGA
AGCGGTCCTGCATATAGTTCAACAGAAAGCCATACACAATTTACAAAGAA
ACATTCTCATATAGAGACTGATGATAAAATCACAGGACCTCTTGAGAACA
CAGGCTTTACACGTGCCAAGAACCCTGAACCAGTCACCCACTACCCTGAA
GCAAACCACAAAAGTGTGCAACCAACATTAAAATCCTACTTGAATCCGAT
TGTACCGAGTATCATGAAGACTTCGTATCAACCACACCAACACAGTGATG
GACGTGAAAGATTGAGTGGCATTTCAAAACATGCAAACCCTGATACCGGA
TTCACAAGATTCATCCAGCCTACAGGTGCTCACACTGCTGCTAAAGGGAA
AGTATGTCATTCTAAACTTCATATTTGAGAatatactttcaaaaaaacga
acaattTATTCTTCAGATATGATTGAATATTGGCTACCATTCCGCTCCAA
GAAACCCGAATTTTCCCACATCTTTGACCTACAGACTTCATTGTTTTTGA
TCTTTTAGTTATCGATATCGATTTCCTTTCTAACAAAATTCCAGAATATT
GCTTTCGAAAACTATCCTAGACTTTTATTGTGATATCTCATTATATTTTC
ACAAACACTTCAGGTTTACACCACACTGGGAGAAGTTGACAACCCGTTCA
CGGTGGAGCGAACCAAGAAATCAGATCCTGCTGAATATCTCAATATGACA
AACCCACATCCTTATCCGAGGTAATTCAATATCCAAAAATTACCAACTTA
ACCCATTAATTTGATCGGTTTATAATGTATGATACAAAAACATAATGAAC
AAATCTAACCTGAATATGAgtttgtttctccactatttttTCTATATTTG
CATAAATTCGTACGAGTTATTCGCAACAACTTTCACTATGTATTGAGTTT
CTCGGCCATTCTCGGTTTTTCCTGGCAATTATAAGTAAGCAATTATCGAT
CTTAGAATTTAGggtgtttataattttttttctgtttcacAATAGTTTGA
GTAAATCAATCTACAATGGACAACAAACAAATGAGCCAGCTTTGAATGAA
AAACTCGGTAACGTGAGTATCGGTAGGAAGGAAAACACTGGACACACGga
caacaacaaaagtttttggtCGACACCCAATGATTCTGAACAGTACAAAA
CTGTCTATAATGATACGTTCTTCGATAAAAACCGAATACCGGAAACCGAG
CGTTCTCGTATCAACGACGATTGTACACGAGATTTACAAGGCGACGGGTT
CACAAAGAGCGAGAAACTGCATCCGGCGCTCGGCTCATACGACGAAGGGA
GCCAATTGAGATTTCTTCATCCCTACGTCAACAGAAGTATAAAAGCACGT
GACCCATTTTATGGGGAGACAAAGTACGCCCACAAAAGTAGACCCCTgct
tttagcttgaaaatttcaagtcagaTATTCGGAGTTAATGAAAGAGTTTT
ATGCTTAGGGTTGTCAGGATATGTCAGCATTTATTCGAATTCGTACTAGA
AAAAGTTGGGtcgattttcaatttcatgtaTCTGATTTAGAGTAACTCGa
ttgtttttattacaaatttcAGTTACTACTCATTCTTCAGGATTGGAATG
AAAACTTTGACCCTTAATATTTGAATATTGCGGAAACTTACCCGGCCTAG
ATATGACCAAAACTCTTCGGAATTCGAGAAATTATGGATTGTTTATCGCG
TTTCCTTCGGTcctatttttttcgtttttgatttttattgattttataaa
ggaatgaggaatgaggtttttgaatttttttttatggaaataattttttg
aatgattttatttttgtacatagcaaatttatttttataatttaactgta
aaattttgaaggggctgaaaaatattattctctactttaggcgtacaaac
tttcgcgagcagaaactttcacaaggtcgaaaaatcgcgaaattcacgac
atttactttcgcgtaTCATCCTGTTAAGAAAATTCAAAgacattaacttt
cgcgaaaaaggccaagtttctgctcgcgaaagtttgttcTTCATCAGAAC
CAGTAATTCTTGAT Coding sequence (CDS) from alignment at sc0000105_pilon:487697..490510+ >MSTRG.13336.2.p2 ID=MSTRG.13336.2.p2|Name=MSTRG.13336.2.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=618bp|location=Sequence derived from alignment at sc0000105_pilon:487697..490510+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGCCGACAGCAAATAGGTAAACCAAATAAGCATGTCAATGAAAGCTA
TGGTGCAGGAAACAATATCATGAAGTTTTATATCACAGAATATTCAAGTC
GTCTTGGTATAGACGATTTCACTCCTCAAAAAGGAAGTTGTGAGGGAACT
GGCTACAAAAGCAACTTTCGCCCAGGCGTTTATTACACAAGAAAACTTGA
TGAGCTAGATAATCCTACAATGGGGTTTACACCACACTGGGAGAAGTTGA
CAACCCGTTCACGGTGGAGCGAACCAAGAAATCAGATCCTGCTGAATATC
TCAATATGAATGAGCCGACAGCAAATAGGTAAACCAAATAAGCATGTCAA
TGAAAGCTATGGTGCAGGAAACAATATCATGAAGTTTTATATCACAGAAT
ATTCAAGTCGTCTTGGTATAGACGATTTCACTCCTCAAAAAGGAAGTTGT
GAGGGAACTGGCTACAAAAGCAACTTTCGCCCAGGCGTTTATTACACAAG
AAAACTTGATGAGCTAGATAATCCTACAATGGGGTTTACACCACACTGGG
AGAAGTTGACAACCCGTTCACGGTGGAGCGAACCAAGAAATCAGATCCTG
CTGAATATCTCAATATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000105_pilon | genome | sc0000105_pilon:487697..490510 + |
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