MSTRG.13320.1.p1 (mRNA) -

Overview
NameMSTRG.13320.1.p1
Unique NameMSTRG.13320.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000105_pilon:278002..279394-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.13320.1.p1 ID=MSTRG.13320.1.p1|Name=MSTRG.13320.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1393bp|location=Sequence derived from alignment at sc0000105_pilon:278002..279394- (Clytia hemisphaerica_ch_hm2_pilon)
AGGAACTGAAAAAATAAACAACAGAAAATGAAGGTTTATTTTGTTGCAGT
TTGTATCTTTCTGGCTTGTTCTCATATTCAATGCAAAAAGCCTATCAAAC
TGGTAAGTGCTTTACTGCTACATTAATAGTTCATTAAAACCTTTCGTAAA
GTCCACCTTAACTTCTCTTGCAAGCGACATTTGTCGACGATGGCTACGTC
AATATTTATCTAGAATTTCGTAGTACAGATTTGTTTGATAATTATTGATT
TTTTTTTCTTCAGAAATTTATCGAAGAACTTCTAGGAGATTCAGGTATGA
TTCTTCATTTCGCAGTCTTAATCAGTGTCCAGTTCTGTTGCCCAAAATTT
CATCAAGGAGACATTCATCATGGTTGCTACTATGGAAACTATCTGGCTTT
ATGCGTATCATCTAGCTGTCTGGTATACACACACTGTATTCTGACTTTAT
GATAAACTAAAAATCACTTTCTTTTCAGTGCCACTGACAAAATGTGTGGA
CCACCCGGCGTATGAAGAAGAACCCGAAATGTTCAAAGAATGTCCAAAAG
GTCAATCCTGTTTCTTCGTCCAAAGAGATATCACCCTTACAATTTTTGGA
ACTTTCTGCGAATGGTCGTTGTCGTAAGTATACCCTTTTACATATGTTTT
TGTCGTTCGATTTTTAAACTTGGGACATGGATACACAGATCTAACATTAA
TCTTTTTGAATAGCAAGATAATTTGATTTTTAAAACACAAATAAATATTT
TTCCAAATTATTCTTAATTTTTTTCTTAGAAAGTACAAAGAATAATTTTG
CCCTAAAAAATGAATTGAATAAATTTTCCTTAGAAAATACATAGAATAAT
TTTCCTTAGAAAATACATAGGATTATTGTACCTTAGCAAATACATAATAT
AATTTTCCCGTAATTCTCCTATATAAGGTAAACAGAACAATTTCCCCTGG
AACCAACGATTTCCCTGGAAAATACACTTTTTTCACTTTTAAATTTTTAG
TTCACCGAACGAAGGGAGTGGTGATAAGAGGCCGGACAATTTTGTTGAAG
AAGAGTCCGGTGAAAGCGAAAGCGAAAGTGAAGAGAACGAAGTTGAAGGA
GAGGGGAATCCAGTCTAGAAATCGATACTTTCCATAATATATTGCAATTT
ACACAAAACACACTATCGGTCGGATTGAAGGATGTCATCCCCTGATTGCA
TAAATGAACAAACTTTGGTGTAAAGAAAATTTTGTGGATTTTGTGAATTT
ACCAAACATGAGATTTGAAACAGGTTTTTGCATTTATTATAAAGATTTAT
TACCCATTAAAACATCCTGCAACCACCAAATAAATTGCCGTCAAATTAAT
TTCATCAACTTGAATATTTGTGCCAAAGTTTCTTCCTTTAAGG

Coding sequence (CDS) from alignment at sc0000105_pilon:278002..279394-

>MSTRG.13320.1.p1 ID=MSTRG.13320.1.p1|Name=MSTRG.13320.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1476bp|location=Sequence derived from alignment at sc0000105_pilon:278002..279394- (Clytia hemisphaerica_ch_hm2_pilon)
TTCACCGAACGAAGGGAGTGGTGATAAGAGGCCGGACAATTTTGTTGAAG
AAGAGTCCGGTGAAAGCGAAAGCGAAAGTGAAGAGAACGAAGTTGAAGGA
GAGGGGAATCCAGTCTAGTGCCACTGACAAAATGTGTGGACCACCCGGCG
TATGAAGAAGAACCCGAAATGTTCAAAGAATGTCCAAAAGGTCAATCCTG
TTTCTTCGTCCAAAGAGATATCACCCTTACAATTTTTGGAACTTTCTGCG
AATGGTCGTTGTCAAATTTATCGAAGAACTTCTAGGAGATTCAGATGAAG
GTTTATTTTGTTGCAGTTTGTATCTTTCTGGCTTGTTCTCATATTCAATG
CAAAAAGCCTATCAAACTGTTCACCGAACGAAGGGAGTGGTGATAAGAGG
CCGGACAATTTTGTTGAAGAAGAGTCCGGTGAAAGCGAAAGCGAAAGTGA
AGAGAACGAAGTTGAAGGAGAGGGGAATCCAGTCTAGTGCCACTGACAAA
ATGTGTGGACCACCCGGCGTATGAAGAAGAACCCGAAATGTTCAAAGAAT
GTCCAAAAGGTCAATCCTGTTTCTTCGTCCAAAGAGATATCACCCTTACA
ATTTTTGGAACTTTCTGCGAATGGTCGTTGTCAAATTTATCGAAGAACTT
CTAGGAGATTCAGATGAAGGTTTATTTTGTTGCAGTTTGTATCTTTCTGG
CTTGTTCTCATATTCAATGCAAAAAGCCTATCAAACTGTTCACCGAACGA
AGGGAGTGGTGATAAGAGGCCGGACAATTTTGTTGAAGAAGAGTCCGGTG
AAAGCGAAAGCGAAAGTGAAGAGAACGAAGTTGAAGGAGAGGGGAATCCA
GTCTAGTGCCACTGACAAAATGTGTGGACCACCCGGCGTATGAAGAAGAA
CCCGAAATGTTCAAAGAATGTCCAAAAGGTCAATCCTGTTTCTTCGTCCA
AAGAGATATCACCCTTACAATTTTTGGAACTTTCTGCGAATGGTCGTTGT
CAAATTTATCGAAGAACTTCTAGGAGATTCAGATGAAGGTTTATTTTGTT
GCAGTTTGTATCTTTCTGGCTTGTTCTCATATTCAATGCAAAAAGCCTAT
CAAACTGTTCACCGAACGAAGGGAGTGGTGATAAGAGGCCGGACAATTTT
GTTGAAGAAGAGTCCGGTGAAAGCGAAAGCGAAAGTGAAGAGAACGAAGT
TGAAGGAGAGGGGAATCCAGTCTAGTGCCACTGACAAAATGTGTGGACCA
CCCGGCGTATGAAGAAGAACCCGAAATGTTCAAAGAATGTCCAAAAGGTC
AATCCTGTTTCTTCGTCCAAAGAGATATCACCCTTACAATTTTTGGAACT
TTCTGCGAATGGTCGTTGTCAAATTTATCGAAGAACTTCTAGGAGATTCA
GATGAAGGTTTATTTTGTTGCAGTTTGTATCTTTCTGGCTTGTTCTCATA
TTCAATGCAAAAAGCCTATCAAACTG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.13320MSTRG.13320Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13320.1.p1MSTRG.13320.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13320.1.p1.exon4MSTRG.13320.1.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13320.1.p1.exon3MSTRG.13320.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13320.1.p1.exon2MSTRG.13320.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13320.1.p1.exon1MSTRG.13320.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000105_pilongenomesc0000105_pilon:278002..279394 -