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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000105_pilon:164746..171493+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13312.3.p1 ID=MSTRG.13312.3.p1|Name=MSTRG.13312.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6748bp|location=Sequence derived from alignment at sc0000105_pilon:164746..171493+ (Clytia hemisphaerica_ch_hm2_pilon)
ACTCTTCAAGGTGTGTTTGAACACGGAAAGATGCATGGTGAAGGAACATT
GACGTGGCCTAACGGAACCATCTTTACTGGAGATTTTGTTTGTAATGAAA
TCAAAGGGAAAGGTTAGAAATTGTTTCTGTAAAATTCATCAACGTATTAT
ATCGCCATATATAATTTATAGGGACAATAGTGGATGACTATTCAGCTTAT
TTCCAGATGTTTCAACAAATGTGGTTTGGTTATCATTCTTTAGTCAATTT
GACACCGAGTTTATTTTTCGGGAGATATTGAAGGCGACGGTAAGCGAAGT
CGACGCAGACCAAAgttgatagttgatgtacggctcttcatcgcctttgc
tcacctaaaaatacacgacggtattttggtgtttttaccgtcatCCAGCA
AAGTGGAAGGCGATTTTggcgacatgtcaactttgctttataccatctcc
ttcgatttatctcgaatacatgaTTTCGCAATTTCTTTAGGTGTTTACAA
ATGGACAGACGGGAGTTGTTACGAAGGTGAAACGTTAAAAGGATTACGTC
ATGGTCAAGGAATTTTCAAATGTGCTGACGGTGCAAAATCATACAAAGGC
CAATGGGTGGAAGGTGCGTACTAATTACCAGTCTCCACTGATAAAAAGTA
TATAGCACGCGGTTcacatattttctcttttttcaaccaatcagaaaagc
TCTTTATTTACTTTTGGTTGTTTCGAAGTATTGCTTTAAGGAGAACCATC
TCCCTTTAAAACGAATCGTTTAAACAAAACAACGCGCGCTACGCCATTCG
ATTGTTCTATTTAACAATGTGATGACTTCTTTCTAGAACGTTTCGACGTA
AGAATGTTGtaaatttttagcattttttatggATCTATTAAGTCTTTTCC
ATTACTTTTGCAAGATCAGCTTCATATAAGGAAGTATGCATTCACTTAAA
GTTGAAGTAAGAAACAGAAATCATGCAATTTTTCACGAAATCTCAAAAAG
GTTTAGCCTTGTTAACTAAAGTCCGTATTTACATGACACACGGCTTAGGC
AATAAATATAGCGTTTTACGGATTTACCTTTGGAATTTATTATCTTTACa
ccttaccatcagatttatcctggTGACTTAAAATCAAACtcgcttagatt
tctaggctaaaaaaaaCTCACATCTCTTTTTGTTTTAGGGAAGCGAAACG
GGAAAGGTATTTTATATTATGACGCGATGGGTACATCGTATTATGATGGC
CAGTGGAAAGACAACCAAAAGGAAGGCAATGGTACTCGAAGGTATGTTTT
TACACGTTGTTTATGaggtcaaaataaattttaaaaacttgaaatacACG
AGTTTAGAATTAAACTACGCACGTGaaaaaaaCTATCaagtaaatttatt
tatttattttatttatttgttctttattttacgTTGGTAATGAAAAATAG
TTACACGTACTTATTAAATCCAAAACGACACTCGAATATTTACTATATAA
CGATTTACTATACACAGTGAGCGACGAGCCTAAATGACTCATACAGTGtt
gaagatgttcttatttctctttttattcattcagaGCAATGATCAAAGGG
ATCAAAGCAAAAGCTACGcataaatctatttcaaaatcTGTGTATTAGAG
CAACAAGAAATCTGTATTTTTCACACTGTTTTAAACTGCTCAaatatctg
aaaatgatttgattcATTATTTGCTTCTCTTTGAAGATATCGGAATGGGA
ATACCTACCAAGGTCAATGGAAGAACAATATAAGAGAAGGAATGGGTACC
ATGCGTTGGTATGACCTTGGACAAGAGTACACTGGTGTCTGGCTCAACGG
GTTACAGTGTGGACACGGTGAAAATACATGGTGAGGCTTCATCAcctgac
ttgaaattttcagttttttaaccGTGTtcttgcttgttttttttataaaa
acgatTCCTATTAAACCTcggaacaaattaaaaataagcTTGGACTGAAg
tttaaaaagtgtttttaagcGAACAATGAACGTGCATACGCCTTTTCGGA
GTTCACGACGCCATTTTGTAAGCGGAGCATATCTAATGGCGGGGGTGCAG
TCGGCCTCAACTAGAGAATCATTTCGGAAAGCCGTAAGCTACGATCTCGG
ACTATTATCGAGTTGTACCCGACTGAGACGGAGCAAAACAAGCCCCCTAG
GGTGATTCCTCCATCACTCCCTCGTCGTGTCTacacaaaaagtaaacaaa
cctttaaaaattcgATTGAAACTCATCCTCAAAcagtcaaaatataattt
tccacttaGAACTAAATCTATCATGGATGTTACTACACAAAACctaaata
tttctcttttttagctTATCAAAAGTCCTCCATTCTTCATCGCCTGATTG
TTCacatctaaaataaaaaaaacaatgctGTGACTGGGGTCTTTCTATAT
AATCATATCAAAGAAAACAGGAATCAAACAAAAGGAGTCTCCTAAAGAAT
TGTTCTGATGTAGGTTGTTCTGCATCAAAGCAATGATAAATGAAATTAGA
ACATTTTTGCTAATTATACAtcagtttgttattgttttgttaGATGGACA
GAGTTTTATATATTTAACATGAATTGCTAAATACTGCTTTTAgctcaata
aaaaaatataaaaataagatCTATTAATTAGGAGAACAatggtgtaaaaa
atttgatgatatATTTGAAATTCAACTAAAAGGAAGAATAAGTTTGAGTA
ATGCTATTCAGAAGTAAATTTCTGTAAGAAAAAAccacaatcatttgttt
tataaaGTCTTAAAGCAGCTGTGCTGTTGTGAGAGCAAATTTATCCGTAC
ATAATCCATAATTTTTCACCGTTGACTGTctataaaatatgtttttttca
aCGGATAGCCCATTCACGAAATCTTGATGATTGTTCACAACACACAGTCT
AAGATTTAGTTTATATTCAAAAATTGGCCAAGCTTTGTAACACTTCCTCT
TTTGTTACTATACAAACCAGATAACATCAACCATCAGCAAGGCCAAATAG
ATAACAACTTGTTTTCTCTCTACCATGTTTGCTAATTCTGCTAAATTCAT
TCATTCTGTCatttgtttttctctaaaataaatAATAGGAAAATGTGAAA
CCGTCCTGATACTGTCCATACACATATGACAATATGACATGGGTTGacaa
aggttcattcacttgtcAAGTGGGGATCGAACCTCGTCAGTCCGATCGAC
AGTCTGACAGTTGCCGCTGTACAGTAACCAAGATTAATGACCACTATAAT
ACCACAGTGCCTGTGTATATCCCAATAGAGCAAAAGGTATAAAAAATATA
TCCGAGAGGAGCATAAAGCTAGCTAGTAGGTTGCTACCAAAACCAACACA
AGATAAGAAGCttctaaaaatcaaatcaagcaAAGGTTACACACAGAGAT
GAGAGAATAAGGTTATACCTGCCTAACCAGTACATAATACTGTAAAAAGA
CAATGATAAAGCAGTAATTAAACACTTTTTTGGTAATTTAGTGAACAAAT
ACAAAAAGACAGCCTTCTCTTTCCATTTTCCATCCACCAAGAAATGAGAA
ACTGCAGAATAGTTTTTAGAAAGGGGAttctgttttgtttacaaagGAAT
CTCCACCGGTCTCTGCCCCTCCACGGCCATTAGATTTGCTCCGCCTGCAA
AATGGCGTCGCGAACTCCGAAATGGCgtattaaaaacaaatttaaaacat
tcaataaaCCTATCAAATTCGAATCAAAAAAGCTTTCTTCTCACTGGCCC
CGTAAATAAATATTGCGCTAAACattgatttcttatttttcaggtATTTG
AAGCGTGTGAAGTCCACACAATACCCATTACGTAATTATTACGTGGGTGA
TTTTTTGAACGGAGAACGACATGGATACGGCGTGTTTCATTACGCAAGCG
GTGCAAAATACGAAGGGGAATGGATGTCAAACCTGAAACATGGCCATGGA
AAATTCACTTTCAAGAATGGATGCGAATTCTCAGGTACCTCTTCTATTAT
TCTTGAATTTATTCTTGACTATCGAATTTTGCGAATCGaccaaattttgt
tgaaaatagcCCTGAAAACACCAAAACTTACAAAATTTACAGTGTTATTA
TGTTCAATGTCTgattttagaagttttgcgtggatttaatttttcCAGTC
AGCTATCTCACACGGTTTTAAATACGACACGTCACCCTTTTATATACTGA
TTAATATTTTTAgcctttccaaaattttgagcTTCATTTGTGATTGTGCA
TTTATACATTCTgtgcaaattattttttttcgaataacaaaaagaatatc
ttttcTTTCGTTGGGcttattttatttctattttccaatttatttaacgt
tggtcTGACATAGTTATAATTAAATAGTATACTAATTAATACCAACTAAC
AACAATTAATCAACTTTCGAAATCAAGAAATAGTCGACATTTCACGTGGA
TAACCCAATAATCCAGGACTTTAAGACCAAGTTGAAAATCAGTCACCAAT
CCCTGCTTCATCATGAATTCCATGTTTAATTAAGATAGTAGAAAGAAAAG
ATCTTACTCATATTTGACAGTCGTTCTGTTTCATTACTGTCATCATGATC
TCTGAGATGCATTAAATGGTTGCAGGAGGCGCGGTCAGCCGCTTCGGcaa
tctatgaactgaacgagGAGATGAGAACAAGGAGTGGAGGCTCGATCCAA
CAAACACAGTCGTTGCTTCTCACAGGACAACACTCAGTGTGAACTCTTTG
TGCCTCTTCGCAAAACGAGTATCTTGCCATTACCTTGCCATCGAGGCAAA
AGGCTCAACCTCAGAATTAATATCTaagaaaaactgatttttttcctATA
CTAACTAAAATTTTTGAGATCGGTCCTTTTTTCTTGTTGGTAAGATCCTT
CTCATGTATACATATTTTTTGTGGGTAGGGTGCATTTTCAAGTTAAGTTA
ATAACAACTTTGCACACTAGAGTTTGGGCTGTTCGTGTTCACAGATCAAG
CAACATTGTGTCACGAGTGGCTTTCTCAAGAATatacttttctctttttt
tttttacatttctttaATCATCCATTCCATGATTTGGTAGTAGTTGTGTG
GAGAGTGCCATACCAATTTGTTATTCTTAAACACGTGTAATCTGGAGCAA
TCATTATACCACGACGGCCCGTGTTTCCCGGCACAATTTCCACTCCGTCC
ATCATTATCAATTTCCAGCGTCGAAAACCCCATACCATTGACATTTTTAT
CGTTGTTGCCGTTGTCGCCCCCAAATGATGCAAATCCCTCCAGTAATTTA
TCATCGAAATGAATTCGATAATCGTTCGATTCTTCCTCGATATAAAACGA
TCCATACTTAGAGACAGTTATGTTACCATCGAACGTCTTTGCCCAAACGA
AGATGTAATATTTGGCACCTGAGTTAGTGACACGGTTGATGAGTTCGTTC
CCCATACGAAATTCACGGTTGATGTCTCCAAATCCTTCTCTGTATTCCTC
CCACGTACGCTGAAAGTTCTCGTTCGACGCTTTGTTCTTCCTGAAGATGA
CCATCCACCCTCCTCCAGAAACCTCCATGTTACAGCTCACTCGTCTTTTA
CCCTTCCCCATCAAATTCATTTCGTATACCTACAAATTTGTGAAATGTGT
GAGATTGGTCAGTTAATCCTTGTGTAAGCCGTCCTTAATTCTCTATGCTG
AAGCCTGCTCTCAGTAAAGGTTTATGATGCTCAGATAGCAACAAAGTTCC
TTGTCGATAAacagttcttttgttttaaagtcagTGGGGATGAGAAGAAT
AGTAAATATCTcacagtgaggattggtttatttgattattttcagtgggg
acaaagaaaaagttttccaCCAGGGAtcttatttttgccaatttttgcaG
TGGGAAGGgattccagtgggtctgtgagaagggggtgtcactTTCATTGG
ATTGTAAGGCAAATgttctaccgactgagctacgcGATCACTATCCAAAC
ACTTTCTTGTAATCTTGAAGAAGGCCGAGAgctgtgtttttctttttcga
ctCCCTAAAATAGGATGgagatttcatttaaaaaaaactgtcaCAGCAGT
CACTTACGCCCGAAACTCTTGCACCAACGCGGTACCAATCTTGACACGAT
TGAATGTCCAAGAAATACTCCATTCCTGTTGAAGGGAGCAGATCTTCCAC
ATTTGTGGTGACGTCGAAGAGTAAGCATCGGAACCATCCTGCATCTTGTT
GAACAGCAAATGACCGACATTCGGTTGGTGAAGTTGCACACATGCTGATA
CACTGTTGTTTGTAAGGCGTTCTCACTGTTTGATATGGGTGGGATGGTGG
CATTCCATTGCTTGACAAAAGGTGGTAGTCCGGTGATGTCTTTGTCGCTT
TGATTTGAATCAGCGCCAAGAAGAGCACAAGTATCTTCGGATCCATTTTC
AGTGCCATGGCATGGCCCCTGTGaaaactttcttgtttttcttctttatg
tTCGATGTTTTGAGGGAAAAATCAATAAGTGTATAAGTTTACCCCCGCTG
TATACTGGGACATGTTTTTCTAAGTCATCtttttttAGATGATATTCTTC
TTCAAAGGCTAGCGTGGTGTAAAAAACTTGTCAAAACATTTCAACCCTAA
GGATATCATAGCATTGAAGTTttgggaaataaaaaaatagaacagGAG Coding sequence (CDS) from alignment at sc0000105_pilon:164746..171493+ >MSTRG.13312.3.p1 ID=MSTRG.13312.3.p1|Name=MSTRG.13312.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4410bp|location=Sequence derived from alignment at sc0000105_pilon:164746..171493+ (Clytia hemisphaerica_ch_hm2_pilon)
ACTCTTCAAGGTGTGTTTGAACACGGAAAGATGCATGGTGAAGGAACATT
GACGTGGCCTAACGGAACCATCTTTACTGGAGATTTTGTTTGTAATGAAA
TCAAAGGGAAAGGTGTTTACAAATGGACAGACGGGAGTTGTTACGAAGGT
GAAACGTTAAAAGGATTACGTCATGGTCAAGGAATTTTCAAATGTGCTGA
CGGTGCAAAATCATACAAAGGCCAATGGGTGGAAGGGAAGCGAAACGGGA
AAGGTATTTTATATTATGACGCGATGGGTACATCGTATTATGATGGCCAG
TGGAAAGACAACCAAAAGGAAGGCAATGGTACTCGAAGATATCGGAATGG
GAATACCTACCAAGGTCAATGGAAGAACAATATAAGAGAAGGAATGGGTA
CCATGCGTTGGTATGACCTTGGACAAGAGTACACTGGTGTCTGGCTCAAC
GGGTTACAGTGTGGACACGGTGAAAATACATGgtATTTGAAGCGTGTGAA
GTCCACACAATACCCATTACGTAATTATTACGTGGGTGATTTTTTGAACG
GAGAACGACATGGATACGGCGTGTTTCATTACGCAAGCGGTGCAAAATAC
GAAGGGGAATGGATGTCAAACCTGAAACATGGCCATGGAAAATTCACTTT
CAAGAATGGATGCGAATTCTCAGATGATATTCTTCTTCAAAGGCTAGCGT
GGTGTAAAAAACTTGTCAAAACATTTCAACCCTAAACTCTTCAAGGTGTG
TTTGAACACGGAAAGATGCATGGTGAAGGAACATTGACGTGGCCTAACGG
AACCATCTTTACTGGAGATTTTGTTTGTAATGAAATCAAAGGGAAAGGTG
TTTACAAATGGACAGACGGGAGTTGTTACGAAGGTGAAACGTTAAAAGGA
TTACGTCATGGTCAAGGAATTTTCAAATGTGCTGACGGTGCAAAATCATA
CAAAGGCCAATGGGTGGAAGGGAAGCGAAACGGGAAAGGTATTTTATATT
ATGACGCGATGGGTACATCGTATTATGATGGCCAGTGGAAAGACAACCAA
AAGGAAGGCAATGGTACTCGAAGATATCGGAATGGGAATACCTACCAAGG
TCAATGGAAGAACAATATAAGAGAAGGAATGGGTACCATGCGTTGGTATG
ACCTTGGACAAGAGTACACTGGTGTCTGGCTCAACGGGTTACAGTGTGGA
CACGGTGAAAATACATGgtATTTGAAGCGTGTGAAGTCCACACAATACCC
ATTACGTAATTATTACGTGGGTGATTTTTTGAACGGAGAACGACATGGAT
ACGGCGTGTTTCATTACGCAAGCGGTGCAAAATACGAAGGGGAATGGATG
TCAAACCTGAAACATGGCCATGGAAAATTCACTTTCAAGAATGGATGCGA
ATTCTCAGATGATATTCTTCTTCAAAGGCTAGCGTGGTGTAAAAAACTTG
TCAAAACATTTCAACCCTAAACTCTTCAAGGTGTGTTTGAACACGGAAAG
ATGCATGGTGAAGGAACATTGACGTGGCCTAACGGAACCATCTTTACTGG
AGATTTTGTTTGTAATGAAATCAAAGGGAAAGGTGTTTACAAATGGACAG
ACGGGAGTTGTTACGAAGGTGAAACGTTAAAAGGATTACGTCATGGTCAA
GGAATTTTCAAATGTGCTGACGGTGCAAAATCATACAAAGGCCAATGGGT
GGAAGGGAAGCGAAACGGGAAAGGTATTTTATATTATGACGCGATGGGTA
CATCGTATTATGATGGCCAGTGGAAAGACAACCAAAAGGAAGGCAATGGT
ACTCGAAGATATCGGAATGGGAATACCTACCAAGGTCAATGGAAGAACAA
TATAAGAGAAGGAATGGGTACCATGCGTTGGTATGACCTTGGACAAGAGT
ACACTGGTGTCTGGCTCAACGGGTTACAGTGTGGACACGGTGAAAATACA
TGgtATTTGAAGCGTGTGAAGTCCACACAATACCCATTACGTAATTATTA
CGTGGGTGATTTTTTGAACGGAGAACGACATGGATACGGCGTGTTTCATT
ACGCAAGCGGTGCAAAATACGAAGGGGAATGGATGTCAAACCTGAAACAT
GGCCATGGAAAATTCACTTTCAAGAATGGATGCGAATTCTCAGATGATAT
TCTTCTTCAAAGGCTAGCGTGGTGTAAAAAACTTGTCAAAACATTTCAAC
CCTAAACTCTTCAAGGTGTGTTTGAACACGGAAAGATGCATGGTGAAGGA
ACATTGACGTGGCCTAACGGAACCATCTTTACTGGAGATTTTGTTTGTAA
TGAAATCAAAGGGAAAGGTGTTTACAAATGGACAGACGGGAGTTGTTACG
AAGGTGAAACGTTAAAAGGATTACGTCATGGTCAAGGAATTTTCAAATGT
GCTGACGGTGCAAAATCATACAAAGGCCAATGGGTGGAAGGGAAGCGAAA
CGGGAAAGGTATTTTATATTATGACGCGATGGGTACATCGTATTATGATG
GCCAGTGGAAAGACAACCAAAAGGAAGGCAATGGTACTCGAAGATATCGG
AATGGGAATACCTACCAAGGTCAATGGAAGAACAATATAAGAGAAGGAAT
GGGTACCATGCGTTGGTATGACCTTGGACAAGAGTACACTGGTGTCTGGC
TCAACGGGTTACAGTGTGGACACGGTGAAAATACATGgtATTTGAAGCGT
GTGAAGTCCACACAATACCCATTACGTAATTATTACGTGGGTGATTTTTT
GAACGGAGAACGACATGGATACGGCGTGTTTCATTACGCAAGCGGTGCAA
AATACGAAGGGGAATGGATGTCAAACCTGAAACATGGCCATGGAAAATTC
ACTTTCAAGAATGGATGCGAATTCTCAGATGATATTCTTCTTCAAAGGCT
AGCGTGGTGTAAAAAACTTGTCAAAACATTTCAACCCTAAACTCTTCAAG
GTGTGTTTGAACACGGAAAGATGCATGGTGAAGGAACATTGACGTGGCCT
AACGGAACCATCTTTACTGGAGATTTTGTTTGTAATGAAATCAAAGGGAA
AGGTGTTTACAAATGGACAGACGGGAGTTGTTACGAAGGTGAAACGTTAA
AAGGATTACGTCATGGTCAAGGAATTTTCAAATGTGCTGACGGTGCAAAA
TCATACAAAGGCCAATGGGTGGAAGGGAAGCGAAACGGGAAAGGTATTTT
ATATTATGACGCGATGGGTACATCGTATTATGATGGCCAGTGGAAAGACA
ACCAAAAGGAAGGCAATGGTACTCGAAGATATCGGAATGGGAATACCTAC
CAAGGTCAATGGAAGAACAATATAAGAGAAGGAATGGGTACCATGCGTTG
GTATGACCTTGGACAAGAGTACACTGGTGTCTGGCTCAACGGGTTACAGT
GTGGACACGGTGAAAATACATGgtATTTGAAGCGTGTGAAGTCCACACAA
TACCCATTACGTAATTATTACGTGGGTGATTTTTTGAACGGAGAACGACA
TGGATACGGCGTGTTTCATTACGCAAGCGGTGCAAAATACGAAGGGGAAT
GGATGTCAAACCTGAAACATGGCCATGGAAAATTCACTTTCAAGAATGGA
TGCGAATTCTCAGATGATATTCTTCTTCAAAGGCTAGCGTGGTGTAAAAA
ACTTGTCAAAACATTTCAACCCTAAACTCTTCAAGGTGTGTTTGAACACG
GAAAGATGCATGGTGAAGGAACATTGACGTGGCCTAACGGAACCATCTTT
ACTGGAGATTTTGTTTGTAATGAAATCAAAGGGAAAGGTGTTTACAAATG
GACAGACGGGAGTTGTTACGAAGGTGAAACGTTAAAAGGATTACGTCATG
GTCAAGGAATTTTCAAATGTGCTGACGGTGCAAAATCATACAAAGGCCAA
TGGGTGGAAGGGAAGCGAAACGGGAAAGGTATTTTATATTATGACGCGAT
GGGTACATCGTATTATGATGGCCAGTGGAAAGACAACCAAAAGGAAGGCA
ATGGTACTCGAAGATATCGGAATGGGAATACCTACCAAGGTCAATGGAAG
AACAATATAAGAGAAGGAATGGGTACCATGCGTTGGTATGACCTTGGACA
AGAGTACACTGGTGTCTGGCTCAACGGGTTACAGTGTGGACACGGTGAAA
ATACATGgtATTTGAAGCGTGTGAAGTCCACACAATACCCATTACGTAAT
TATTACGTGGGTGATTTTTTGAACGGAGAACGACATGGATACGGCGTGTT
TCATTACGCAAGCGGTGCAAAATACGAAGGGGAATGGATGTCAAACCTGA
AACATGGCCATGGAAAATTCACTTTCAAGAATGGATGCGAATTCTCAGAT
GATATTCTTCTTCAAAGGCTAGCGTGGTGTAAAAAACTTGTCAAAACATT
TCAACCCTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000105_pilon | genome | sc0000105_pilon:164746..171493 + |
|
