MSTRG.13299.1.p1 (mRNA) -

Overview
NameMSTRG.13299.1.p1
Unique NameMSTRG.13299.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000104_pilon:1141981..1143478-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.13299.1.p1 ID=MSTRG.13299.1.p1|Name=MSTRG.13299.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1498bp|location=Sequence derived from alignment at sc0000104_pilon:1141981..1143478- (Clytia hemisphaerica_ch_hm2_pilon)
GAATGTTACTCCTCACTTATCAAAGTAACCCCAATTGACGGTATATAGTG
TTTGGTAGGAGAGTTTGTGAATGCTGAACCATTTAGGCCAACTAGGTGTC
TCAAGGGAAATTTTGTCAATCTTGTTCATTAGACTTTCAGACCCTGCAAG
CATTTCTAGTCTGAAAAGAAGGATTTTGGGTTGTGTCATGACAAAGGAAG
GATTTTTTAAAAAGTGATATTTTGTTATTTTTTGTAGATATTTTCTTCAT
CCACAATGTCACGGGTCTCAGAACATATGGACAGAACAAAAGAGAATACT
TTAACTGTATTCTGCAGAGCCCGTCAGCATCGCTCAGAGCCGTGTGCTAC
TCACCTAAAAACACAAGTTAATGTGTGATATCAGTCCAAGTCGCCTGTTA
AAATCACAAAACTTCACTCAGATATAAATAATAATGACATTGTCGTGAAA
GATGATGCTGAAATCATTTTGCCTCGTGGACGATTCTCATTTCAACCGGA
TGAGATTTTCCACCGATGCTATCAACACAATAACTGATCTATATAGCCTA
GCTCCAGGCCAGCTAGTTAGACATCTTAAGTGCCATGTTACCCGTGTTTT
TGATATTACTGAACACAAAACGAGAAAAGATACTGCTGTTGATCGTTAAG
AAGTAATCGTAAGTGACGAGTCAAATTCCATTAAGCTGATGATGTTGACA
GTCTGGTGGCCAACAAATCTTACTTGCTCAAGAATATTCGCCTGAATTCA
TACAATGGGCGAATTTACATTAACACGACTCAGCAAAGGGCATTCGAGAA
AGAAGAAATTGAAGAAATCAAAGCTATTGATCTTAGTGCCACAACCGAAA
TAACGATCATGGCCAAAATCATTGGCATAAATTCCATCAACATGTCTTAC
TTCTGTGTCAATTGCAACAAACGAATTGATACCCCAGGTGATCCTGAAGA
GATGCAGCAGTGTATGCAAGCTCACATGTTCCTTGCAAATTGTCGAGTAA
GTGTCAATTTCACCCTTGTCATCAGCAACATTGCTGACAATGCCAGACAT
AACATATTTTTCAATATGGATAAGGTTTTGCAACTTCAAAACATTATCCC
ATTTCCATTAGTGGAAAGTGAAATGGCAAAAATACTGTTACAATTCCCAG
ACATTATCAATGTTAGTTTTGACATTGTATCCAAATCTGTGATAAGTGTC
ATGAAAGTTTGAACATGTACTTTTTTTCATAGTTGATATTTTTCTTTGTC
TATAGTTTTGAAAGCAATCTGGTGTTGCAAAGTCTTTGTTTACTAATGTA
TGCCTTGTATTTTTATGACATGCATCCAAATCTGTGATGTCTTTTTTCAT
AGTTGATATTTTTATATTATATTTTGTATATAGTTTTAGAAGCAATCTGA
TATTGTAGATTCTTTGCTCGACTTGAAGCTCGTGTATTTTGCAAACCTTC
TAAAAGGCTGCATTGAAGACTTGAAATTCTGTGAGAGGAAACACTTTT

Coding sequence (CDS) from alignment at sc0000104_pilon:1141981..1143478-

>MSTRG.13299.1.p1 ID=MSTRG.13299.1.p1|Name=MSTRG.13299.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=354bp|location=Sequence derived from alignment at sc0000104_pilon:1141981..1143478- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCCAAAATCATTGGCATAAATTCCATCAACATGTCTTACTTCTGTGT
CAATTGCAACAAACGAATTGATACCCCAGGTGATCCTGAAGAGATGCAGC
AGTGTATGCAAGCTCACATGTTCCTTGCAAATTGTCGAGTAAGTGTCAAT
TTCACCCTTGTCATCAGCAACATTGCTGACAATGCCAGACATAACATATT
TTTCAATATGGATAAGGTTTTGCAACTTCAAAACATTATCCCATTTCCAT
TAGTGGAAAGTGAAATGGCAAAAATACTGTTACAATTCCCAGACATTATC
AATGTTAGTTTTGACATTGTATCCAAATCTGTGATAAGTGTCATGAAAGT
TTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.13299MSTRG.13299Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13299.1.p1.exon1MSTRG.13299.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13299.1.p1MSTRG.13299.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000104_pilongenomesc0000104_pilon:1141981..1143478 -