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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000104_pilon:1035906..1038585- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13294.1.p1 ID=MSTRG.13294.1.p1|Name=MSTRG.13294.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2680bp|location=Sequence derived from alignment at sc0000104_pilon:1035906..1038585- (Clytia hemisphaerica_ch_hm2_pilon)
AAACAATGTTACCAAGTTGGTGGTAATGGCAAAGTAAAATTCACATCACT
ACCTCTGGGTGTGGACCTAAGAACATCGATTAGGTCACTTTTTCCTAGAC
TTAATGAGACTTTCTTTTTGTATACTACAAAACAAAATAAAACTTACCAA
GAGCTTAATGTAAACAGTGCTGAAGAATTGAGGCAAATGAATCACCAAGG
AGTAATCATCGTTACAAATGAGAGAGTCAATGAAAATCTAATGCCTCTTT
CTCAAGGTACCTACCATTTAAATCTTTAATTCAATGGTCTTGATTATTCT
TGATGATTTTATCTGATTTTTTTAAACGTAAAAAAGAAGCAATGAGCATC
CCAAGCTTCTTCATTTCATGGAAATAAATTAATTGATATAAGTTGTCACT
TTTGAAATAGCAATAAAAGGTGAATAGTGCCATACCCACAATGTTGAAAA
TTTAAAAAGTACCACAGTGTTAGTTTTGAACAAATGGCTGCTTTTCATAA
ACAATCTATTTTGTTCTTTTTTTAGATGGTAACATGAACCCTTCAAATGG
TGGTTATCTTCTGAACAACTTATCCTTTCAATCTCAACTGTCTAATGAAA
CCTTAGCACATCAGCCACTATCTAGAATGATTAACCCAACTCAATCAATG
ATGCCAACACTTATGGATCAGAGCATATCAAACATATCAGGACTAGTAGG
TAAGGCTTAAAGGAAATGTTACTGTATTATATGGGTGTCTGCGATGTATA
CACTAAAATCTGGCTCCACCAATGAATGAGTAAATTTATTTGATTGGCTT
ATTGGTATATTGAAAGTTGTTCCAATAGATATCATAAGTAGATCTTACAT
TGTATCTATAGACAAAAACTTCAGTGAAAGCATAAAACCAGAAAAAGCTA
GAACGATGTTGAATTAAAAGAAAGGGAATGTTTAAAGAAAGTGACTTTTA
TGTAACACTCCTATCAACCTATTCTTTAAAATTATAGTGTAAAAACACCA
ATCTGTTCTTTATAAAAATAACAAGTTTTTAAAGATGTTATGTTAGCGCT
TTAACCCATTCTATCAGTTTTTTTCTTTTAAAGTTGTAATAAAAGATGAA
GAGTACCATACCCACAATCTTGAAAATTTAAAAATATTCACAGTGTTAGT
TTTGAAAGAATGTCTTCTTTACATAAACAATCTATTTTGTTCATTTTTTA
GATGTTAACATGAACTCTTCAAATGGTGGTTATCTTCTGAACAACTTATC
ATTTCAATCTCAACTGTCTAATGAAACCTTAGCAAATCAGCCACTATCTG
TAATGGTTAACCCAACTCAATCACTGATGCCAACACTTATGGATCAGAGC
GTATCAAACATATCAGGACTAGTAGGTGAGGAAATGTATTATATGGGGGG
TCTGTGGTATACACTGAAATCTTGCTCCAATCAGTAAATTTATTTCATTG
GCCCTATTAATATATTGAAAGTAGTTCCAATAGATATGTCCAATTAAAAA
GTAGATCTCACATTGTATTGTCAATTAAAAATATAAAACCAGAAAAGGCT
AGAATGATGTTGAATAAAAGAAAGGGAATTTTTCCCTTGAAAAGAAAGTG
ACTTTTTATGCATTTACAACTCCTATCAACTTCTACATTTAATAGTTTTG
ATTTCTGCCTGGGCTTGCTTGCATCTTTAGGTTTCTCTCCATTTGTTCTA
ATTGTTTTTGAATGTAAAATTCAATTGTTATCTATTATGGATAAAAAAAC
ATGCAAGTTTGAATATTGTTCAACATTTTTCTCATGACTTCAGACTGAAT
CAAAACTTTAATTTCCTGTGTGGAAAATCCTGATAACACATAAAACATAA
TTTTTGTTAAAAAAGTGATCAAGACACGTCAAATTTAAAAAAATTTCAAA
AAATATTGTTCTGTACAGTCACTGACATCATCTGGCGGATTTTTCGGTGA
GAATTCGATTACCTAACCAAATCAATTTTCATTTCAAAAAAGTGTACCTT
ATTTTGTCATGGTGTGGTCGAAACTCAACTTTTAATAAATTCATTTTTTG
TTTGAATCAGAGTTTGTTAAGCAGCTACCAACGGATGAATGCTGCAATTT
CTTACGCTTTGTTATTGGATGTGAGCGACTGGCAAAGATTTAGGTTGAGT
TTAATGGTGCAATCTATCGAGAGCTTATGGTACATCTTCCTCACACATGT
GGGCCTACATTAGATTGTTTGAATCAGACATAAAATATTATTTGGAAATT
CTTTTCTGTATTTTTAGATGTTGATTTGAATCCATTAGCTGGTCCAGTTG
TCAACAACCTTACTAACCTTATACACCTACCAACCGATATCAGTTCGGCC
CTCAGTGAATCATATTCTGTACCATCAACAGCAGATCCAGTTGCTAACCA
CCAGCCTGCAACATTAAACAGATCGACCAGCAGTCTCTCACCTTCCGTAC
CATCGACAGCAAATCCAGTTGCCAGCCACCAGCCAACACTGTCAAACTGC
TCAACAATCAGTCTCTCACCGTCTGTACCATCAACAGCAAATCCAGTTGC
TAACCACCAGCCTGCAACATTAAACAGATCGACCAGCAGTCTCTCACCTT
CCGTACCATCAACAGCAAATCCAGTTGCCAGCCACCAGCCAACACTGTCA
AACTGCTCAACAATCAGTCTCTCACCGTCT Coding sequence (CDS) from alignment at sc0000104_pilon:1035906..1038585- >MSTRG.13294.1.p1 ID=MSTRG.13294.1.p1|Name=MSTRG.13294.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4068bp|location=Sequence derived from alignment at sc0000104_pilon:1035906..1038585- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGATTTGAATCCATTAGCTGGTCCAGTTGTCAACAACCTTACTAAC
CTTATACACCTACCAACCGATATCAGTTCGGCCCTCAGTGAATCATATTC
TGTACCATCAACAGCAGATCCAGTTGCTAACCACCAGCCTGCAACATTAA
ACAGATCGACCAGCAGTCTCTCACCTTCCGTACCATCGACAGCAAATCCA
GTTGCCAGCCACCAGCCAACACTGTCAAACTGCTCAACAATCAGTCTCTC
ACCGTCTGTACCATCAACAGCAAATCCAGTTGCTAACCACCAGCCTGCAA
CATTAAACAGATCGACCAGCAGTCTCTCACCTTCCGTACCATCAACAGCA
AATCCAGTTGCCAGCCACCAGCCAACACTGTCAAACTGCTCAACAATCAG
TCTCTCACCGTCTATGTTAACATGAACTCTTCAAATGGTGGTTATCTTCT
GAACAACTTATCATTTCAATCTCAACTGTCTAATGAAACCTTAGCAAATC
AGCCACTATCTGTAATGGTTAACCCAACTCAATCACTGATGCCAACACTT
ATGGATCAGAGCGTATCAAACATATCAGGACTAGTAGATGGTAACATGAA
CCCTTCAAATGGTGGTTATCTTCTGAACAACTTATCCTTTCAATCTCAAC
TGTCTAATGAAACCTTAGCACATCAGCCACTATCTAGAATGATTAACCCA
ACTCAATCAATGATGCCAACACTTATGGATCAGAGCATATCAAACATATC
AGGACTAGTAGAAACAATGTTACCAAGTTGGTGGTAATGGCAAAGTAAAA
TTCACATCACTACCTCTGGGTGTGGACCTAAGAACATCGATTAGGTCACT
TTTTCCTAGACTTAATGAGACTTTCTTTTTGTATACTACAAAACAAAATA
AAACTTACCAAGAGCTTAATGTAAACAGTGCTGAAGAATTGAGGCAAATG
AATCACCAAGGAGTAATCATCGTTACAAATGAGAGAGTCAATGAAAATCT
AATGCCTCTTTCTCAAGATGTTGATTTGAATCCATTAGCTGGTCCAGTTG
TCAACAACCTTACTAACCTTATACACCTACCAACCGATATCAGTTCGGCC
CTCAGTGAATCATATTCTGTACCATCAACAGCAGATCCAGTTGCTAACCA
CCAGCCTGCAACATTAAACAGATCGACCAGCAGTCTCTCACCTTCCGTAC
CATCGACAGCAAATCCAGTTGCCAGCCACCAGCCAACACTGTCAAACTGC
TCAACAATCAGTCTCTCACCGTCTGTACCATCAACAGCAAATCCAGTTGC
TAACCACCAGCCTGCAACATTAAACAGATCGACCAGCAGTCTCTCACCTT
CCGTACCATCAACAGCAAATCCAGTTGCCAGCCACCAGCCAACACTGTCA
AACTGCTCAACAATCAGTCTCTCACCGTCTATGTTAACATGAACTCTTCA
AATGGTGGTTATCTTCTGAACAACTTATCATTTCAATCTCAACTGTCTAA
TGAAACCTTAGCAAATCAGCCACTATCTGTAATGGTTAACCCAACTCAAT
CACTGATGCCAACACTTATGGATCAGAGCGTATCAAACATATCAGGACTA
GTAGATGGTAACATGAACCCTTCAAATGGTGGTTATCTTCTGAACAACTT
ATCCTTTCAATCTCAACTGTCTAATGAAACCTTAGCACATCAGCCACTAT
CTAGAATGATTAACCCAACTCAATCAATGATGCCAACACTTATGGATCAG
AGCATATCAAACATATCAGGACTAGTAGAAACAATGTTACCAAGTTGGTG
GTAATGGCAAAGTAAAATTCACATCACTACCTCTGGGTGTGGACCTAAGA
ACATCGATTAGGTCACTTTTTCCTAGACTTAATGAGACTTTCTTTTTGTA
TACTACAAAACAAAATAAAACTTACCAAGAGCTTAATGTAAACAGTGCTG
AAGAATTGAGGCAAATGAATCACCAAGGAGTAATCATCGTTACAAATGAG
AGAGTCAATGAAAATCTAATGCCTCTTTCTCAAGATGTTGATTTGAATCC
ATTAGCTGGTCCAGTTGTCAACAACCTTACTAACCTTATACACCTACCAA
CCGATATCAGTTCGGCCCTCAGTGAATCATATTCTGTACCATCAACAGCA
GATCCAGTTGCTAACCACCAGCCTGCAACATTAAACAGATCGACCAGCAG
TCTCTCACCTTCCGTACCATCGACAGCAAATCCAGTTGCCAGCCACCAGC
CAACACTGTCAAACTGCTCAACAATCAGTCTCTCACCGTCTGTACCATCA
ACAGCAAATCCAGTTGCTAACCACCAGCCTGCAACATTAAACAGATCGAC
CAGCAGTCTCTCACCTTCCGTACCATCAACAGCAAATCCAGTTGCCAGCC
ACCAGCCAACACTGTCAAACTGCTCAACAATCAGTCTCTCACCGTCTATG
TTAACATGAACTCTTCAAATGGTGGTTATCTTCTGAACAACTTATCATTT
CAATCTCAACTGTCTAATGAAACCTTAGCAAATCAGCCACTATCTGTAAT
GGTTAACCCAACTCAATCACTGATGCCAACACTTATGGATCAGAGCGTAT
CAAACATATCAGGACTAGTAGATGGTAACATGAACCCTTCAAATGGTGGT
TATCTTCTGAACAACTTATCCTTTCAATCTCAACTGTCTAATGAAACCTT
AGCACATCAGCCACTATCTAGAATGATTAACCCAACTCAATCAATGATGC
CAACACTTATGGATCAGAGCATATCAAACATATCAGGACTAGTAGAAACA
ATGTTACCAAGTTGGTGGTAATGGCAAAGTAAAATTCACATCACTACCTC
TGGGTGTGGACCTAAGAACATCGATTAGGTCACTTTTTCCTAGACTTAAT
GAGACTTTCTTTTTGTATACTACAAAACAAAATAAAACTTACCAAGAGCT
TAATGTAAACAGTGCTGAAGAATTGAGGCAAATGAATCACCAAGGAGTAA
TCATCGTTACAAATGAGAGAGTCAATGAAAATCTAATGCCTCTTTCTCAA
GATGTTGATTTGAATCCATTAGCTGGTCCAGTTGTCAACAACCTTACTAA
CCTTATACACCTACCAACCGATATCAGTTCGGCCCTCAGTGAATCATATT
CTGTACCATCAACAGCAGATCCAGTTGCTAACCACCAGCCTGCAACATTA
AACAGATCGACCAGCAGTCTCTCACCTTCCGTACCATCGACAGCAAATCC
AGTTGCCAGCCACCAGCCAACACTGTCAAACTGCTCAACAATCAGTCTCT
CACCGTCTGTACCATCAACAGCAAATCCAGTTGCTAACCACCAGCCTGCA
ACATTAAACAGATCGACCAGCAGTCTCTCACCTTCCGTACCATCAACAGC
AAATCCAGTTGCCAGCCACCAGCCAACACTGTCAAACTGCTCAACAATCA
GTCTCTCACCGTCTATGTTAACATGAACTCTTCAAATGGTGGTTATCTTC
TGAACAACTTATCATTTCAATCTCAACTGTCTAATGAAACCTTAGCAAAT
CAGCCACTATCTGTAATGGTTAACCCAACTCAATCACTGATGCCAACACT
TATGGATCAGAGCGTATCAAACATATCAGGACTAGTAGATGGTAACATGA
ACCCTTCAAATGGTGGTTATCTTCTGAACAACTTATCCTTTCAATCTCAA
CTGTCTAATGAAACCTTAGCACATCAGCCACTATCTAGAATGATTAACCC
AACTCAATCAATGATGCCAACACTTATGGATCAGAGCATATCAAACATAT
CAGGACTAGTAGAAACAATGTTACCAAGTTGGTGGTAATGGCAAAGTAAA
ATTCACATCACTACCTCTGGGTGTGGACCTAAGAACATCGATTAGGTCAC
TTTTTCCTAGACTTAATGAGACTTTCTTTTTGTATACTACAAAACAAAAT
AAAACTTACCAAGAGCTTAATGTAAACAGTGCTGAAGAATTGAGGCAAAT
GAATCACCAAGGAGTAATCATCGTTACAAATGAGAGAGTCAATGAAAATC
TAATGCCTCTTTCTCAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000104_pilon | genome | sc0000104_pilon:1035906..1038585 - |
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