MSTRG.13293.2.p1 (mRNA) -

Overview
NameMSTRG.13293.2.p1
Unique NameMSTRG.13293.2.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000104_pilon:1008286..1009913-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.13293.2.p1 ID=MSTRG.13293.2.p1|Name=MSTRG.13293.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1628bp|location=Sequence derived from alignment at sc0000104_pilon:1008286..1009913- (Clytia hemisphaerica_ch_hm2_pilon)
CAAGATGAAGAGGAAAATCAAACATTTCGATTTGGTTGTCTACGTCAACT CAAAAGGGTCCTCGATATTCCTGGGACATCTCAAGCAGGTCAGAAAAACG CGCCCATACAGGTGTTGCCCAACCACAACAACGATGTAGATGCGGGTACA CCCAACGGGGTGCTGCTGGATGACAACAACTTTGAGGTAGATGCGGACAC ACCAAGCGTGGTGCTGTCCGATGACAACAATGATGCGGGCACACATGACG ATATTTAGCTGTCCGATGACAACACAGATGAGGAGGCTGCGGGTACACTG TCACAGGTGTTGCCCGATTACAACAATGATGTAGATACGGACACGCCCAC CGGGGTGCTGTTGGATGACAACAACTTTGAGGTAGATGCGGGCACACCAA ACGTGATGCTGTCCGATGACAACAATGATGCGGGCACACATAACGATATT GTGCTGTTCGATGTCAAAACTGAAGAGGAAGCTGTGGGCACACCTGGAGA GGGGCAGGAGGAAACCAATGAAGAAGCATCTGACCTGTCGCTGCCCAACG CCAACACCAAGGACTCAATGCTACGATCAATCATTGACCTCCCGAGGTTG CCACTCATCTCCCCTCCTAGATTACAAAGTTATGAGGACAACCTAGAACA ACAAGATACTCCACGACGGTCAACACGACAAAGAAAACCAGCAAAGCATC TCACCTACAACAGTTTTGGCGAACCATCCCTCCAACCTGTTTGTCCCCTC TACCAAAACCCCAAAGAAACAAATTGAGCTTATCGAAAGAATTGGGGATA CGAACGACCTCTAAAATTTAAAGGGGTAGGAATAAGGAATAAAAAGAGAC ATTTTAAAATTTTTTGAAAAGATTCTGCAGGAACTTGTACATTTCCAGCC ATAGTACTCATGGTTTTGCTGCATCTCACAATGTTTGTTTGGTAGCGAGA AAAATTACTAATGCACCATTCTTCTCTTTTCATGTACTTCCCCCTCCTAC TGAGCTCGACATCAACAATCAACCCAGACGACGAATTAAAACGACTGCTC CGGTGAAGTGCCCCCTATATGTATCGACCTCTCGCTTGTGCTGATGTTCA AGGATGATGATTGGGACGAATGAAAGGAGATTGGTTTAATATTGTTGTGG TTAACAAGTTGAATGGTAATGTAAAATGTGTCATATATAATGTGTTTATA CTCTTTTGGTTACTCAAGTGAGTTCATATAATATCATGTTATAGAATATA TATTATGTTATTATGTTTTCCCTACCTTGCTGACTCATCTGATAGTGTCT GGAGGAATGTAGCATTTGGAGTCAGCAAGGCCCCCCTGGTTTCTGTTTGC CTTGTTTGCCCAACTGCACTGTTATGCTCTCTGCTCCAGTCCCCTTTTGC TATAAAGCCTTTGCATGCAGGCAGTTCCAGTTGGGCTAGAGTCAGTGCTA CCTTGACTAGCAAAATAAAGTGAAGTTAAAGTGCTTCGTCTGATAAGCCT TTAACTAAACTAAAACTTGTACATATTTGATTTGGTATATCTCAAGATGT TTTAGAGGAAGGGATTTATACAAAGGATTTGTAAATCCTCCTCGTCTCAT TCAACTGATACCCGCACTTGTTAATAAC

Coding sequence (CDS) from alignment at sc0000104_pilon:1008286..1009913-

>MSTRG.13293.2.p1 ID=MSTRG.13293.2.p1|Name=MSTRG.13293.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1164bp|location=Sequence derived from alignment at sc0000104_pilon:1008286..1009913- (Clytia hemisphaerica_ch_hm2_pilon)
GTAGATGCGGGCACACCAAACGTGATGCTGTCCGATGACAACAATGATGC
GGGCACACATAACGATATTGTGCTGTTCGATGTCAAAACTGAAGAGGAAG
CTGTGGGCACACCTGGAGAGGGGCAGGAGGAAACCAATGAAGAAGCATCT
GACCTGTCGCTGCCCAACGCCAACACCAAGGACTCAATGCTACGATCAAT
CATTGACCTCCCGAGGTTGCCACTCATCTCCCCTCCTAGATTACAAAGTT
ATGAGGACAACCTAGAACAACAAGATACTCCACGACGGTCAACACGACAA
AGAAAACCAGCAAAGCATCTCACCTACAACAGTTTTGGCGAACCATCCCT
CCAACCTGTTTGTCCCCTCTACCAAAACCCCAAAGAAACAAATTGACAAG
ATGAAGAGGAAAATCAAACATTTCGATTTGGTTGTCTACGTCAACTCAAA
AGGGTCCTCGATATTCCTGGGACATCTCAAGCAGGTCAGAAAAACGCGCC
CATACAGGTGTTGCCCAACCACAACAACGATGTAGATGCGGGTACACCCA
ACGGGGTGCTGCTGGATGACAACAACTTTGAGGTAGATGCGGGCACACCA
AACGTGATGCTGTCCGATGACAACAATGATGCGGGCACACATAACGATAT
TGTGCTGTTCGATGTCAAAACTGAAGAGGAAGCTGTGGGCACACCTGGAG
AGGGGCAGGAGGAAACCAATGAAGAAGCATCTGACCTGTCGCTGCCCAAC
GCCAACACCAAGGACTCAATGCTACGATCAATCATTGACCTCCCGAGGTT
GCCACTCATCTCCCCTCCTAGATTACAAAGTTATGAGGACAACCTAGAAC
AACAAGATACTCCACGACGGTCAACACGACAAAGAAAACCAGCAAAGCAT
CTCACCTACAACAGTTTTGGCGAACCATCCCTCCAACCTGTTTGTCCCCT
CTACCAAAACCCCAAAGAAACAAATTGACAAGATGAAGAGGAAAATCAAA
CATTTCGATTTGGTTGTCTACGTCAACTCAAAAGGGTCCTCGATATTCCT
GGGACATCTCAAGCAGGTCAGAAAAACGCGCCCATACAGGTGTTGCCCAA
CCACAACAACGATGTAGATGCGGGTACACCCAACGGGGTGCTGCTGGATG
ACAACAACTTTGAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.13293MSTRG.13293Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13293.2.p1.exon2MSTRG.13293.2.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13293.2.p1.exon1MSTRG.13293.2.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13293.2.p1MSTRG.13293.2.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000104_pilongenomesc0000104_pilon:1008286..1009913 -