MSTRG.13286.1.p1 (mRNA) -

Overview
NameMSTRG.13286.1.p1
Unique NameMSTRG.13286.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000104_pilon:791760..792824+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.13286.1.p1 ID=MSTRG.13286.1.p1|Name=MSTRG.13286.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1065bp|location=Sequence derived from alignment at sc0000104_pilon:791760..792824+ (Clytia hemisphaerica_ch_hm2_pilon)
ctgagagaaagagctttccaacgataccaaagttgatacctgaatcatAT
TTGTTATGGTCAAAAAATgtcctttgaaagaataaatttccagaaaaaaa
tgatgaactttttagcctttttcaaaaaagttagcggcTTGGAAAGGTTA
AAATCtggaaaatctggaaatttttatttttggacatAAGACTGGTGTGA
GTGTGTTTAATTGTAGCAGAATTATTACTGATAGCTTCAAAAATATGTTA
TTTGCTTGATTGTTTGTTTATAATTTGGTGTATTCATCAAGTAACCATGA
TACTTGATTGTTACTCAGTCGCACATGAgtttgtgtttgattgtgttttg
aggatttttgttgtcaagagtaactgttgttttgtgttgtcatgttaaat
gttgGATACATAGTTCTTTCGATGATCTCTCATATAATTTTGCATTATAT
ACATGCAGACTGATGAAGATTTCGCTTTGAGAATGCCTGAAAGCTGGAGA
AATTATCTGAACCTGGCTGACCAGCAGTGGATCGGTCGTATTGTTTTTGA
TGAAAGGCAGGGGAAGAGATCCGTTTTATCGAATCCTGTTAGATTGTGGT
ATAACCCACCCGCCAGGAAGTCCAAAAGTAATAACAGCACCGTTCTGTTG
AAACCAGAAGCTGTTCAATACTTTCGTCGTCGTTTGTGTCTTTGGGTACC
CAGACGTGCTTACAATTGGGATTTTTTGTGCCCTAGTTGTAGGAAAAGCT
TAACTTCTAAAGGATTGTATCCAAAAATTAGAAAGGTTCTTGATATTTCT
GGTTGGTACTACCTGGCTACAGAGTACATGGAGTGTCGTAGTTGTAATGT
TCATGCAAATTCTTGGGACAGAAGAATTCTCGATCAGCTCCCTATTGGTA
TTCGAGTGAAATTTCCAGCCCTCCTCACACTGAAGTATTCAGTTGATCAG
GCAGTGGTCACATTTTTGAAATCCCGCACTCTTGGCAACACACCAACAGC
ATTCGCCAATTCACTGAAAGAGGTGCATATCGAAGCATGGATGAAGACGA
ACATCAATTATATGC

Coding sequence (CDS) from alignment at sc0000104_pilon:791760..792824+

>MSTRG.13286.1.p1 ID=MSTRG.13286.1.p1|Name=MSTRG.13286.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=612bp|location=Sequence derived from alignment at sc0000104_pilon:791760..792824+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAGACTGATGAAGATTTCGCTTTGAGAATGCCTGAAAGCTGGAGAAA
TTATCTGAACCTGGCTGACCAGCAGTGGATCGGTCGTATTGTTTTTGATG
AAAGGCAGGGGAAGAGATCCGTTTTATCGAATCCTGTTAGATTGTGGTAT
AACCCACCCGCCAGGAAGTCCAAAAGTAATAACAGCACCGTTCTGTTGAA
ACCAGAAGCTGTTCAATACTTTCGTCGTCGTTTGTGTCTTTGGGTACCCA
GACGTGCTTACAATTGGGATTTTTTGTGCCCTAGTTGTAGGAAAAGCTTA
ACTTCTAAAGGATTGTATCCAAAAATTAGAAAGGTTCTTGATATTTCTGG
TTGGTACTACCTGGCTACAGAGTACATGGAGTGTCGTAGTTGTAATGTTC
ATGCAAATTCTTGGGACAGAAGAATTCTCGATCAGCTCCCTATTGGTATT
CGAGTGAAATTTCCAGCCCTCCTCACACTGAAGTATTCAGTTGATCAGGC
AGTGGTCACATTTTTGAAATCCCGCACTCTTGGCAACACACCAACAGCAT
TCGCCAATTCACTGAAAGAGGTGCATATCGAAGCATGGATGAAGACGAAC
ATCAATTATATG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.13286MSTRG.13286Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13286.1.p1.exon1MSTRG.13286.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13286.1.p1MSTRG.13286.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000104_pilongenomesc0000104_pilon:791760..792824 +