MSTRG.13280.2.p1 (mRNA) -

Overview
NameMSTRG.13280.2.p1
Unique NameMSTRG.13280.2.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000104_pilon:702154..703466-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.13280.2.p1 ID=MSTRG.13280.2.p1|Name=MSTRG.13280.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1313bp|location=Sequence derived from alignment at sc0000104_pilon:702154..703466- (Clytia hemisphaerica_ch_hm2_pilon)
AGAGCTACAAAAGAGCGGGCTGTGCACACGAGGAACTTGGAAGAAATAAC
GCACCTACTGGAAACTTTTAAAAAACAAAATACAAAGAAACAAGAAACTA
TAGACGAACAAAATCAACACATTGAGAATCTGAAAAACTTATCGGACGAA
GAAAAAAAGATAGCTGAAGAAGCTTTGGCTCAAATCGATAAGTTGAAATA
TGATTTGGGAGAATCCAAGAGTGATCAACGTAGCTTAGAATCACAATTAG
AAGAATTGAAGATACAACAACTTGAAACAGTACGGCATTTCAAGGATCTG
TTGAGACAGCAGGGACAACTGACAGGAAAAAGGCAACCGGTTAGTTTTAT
AAATTTAAGAAATCCGCTGATAAAATCTTGACAAGTTCAGAGTTTTTAGT
CAAATTTACTACTTTAAATTTTACTTCCCTACCCTCGTCTCAGTTCAACT
CGTCCTTGTTTATAATTTGAGTGGAATGAAAGGTACCCAAAAGAAAGAGG
AATTCTAAGCCATCCAGCAACGAGCTATGAATGATAAATGAATTCTCTCT
AACTTCAGAGATATTGTAATCTAAAGTTAATTTTCTAAACATACTGTAAA
CTTAGAAACAATGACTTCACTTCACGTTTACCTCCTTCTTGATTTCCATC
GATACTCAATCATTTTTCTTACTTTTTCACAGGTAGAAGAGAAGAAGAAG
TTCACAACCCTTTTAAGAAGGTTTTTCAAAAAACATTAAAATTCTTTTCC
TCATTAACATTGACACGTTTATACACCATAACCCGATCTTAACTGGAATT
TCGACAACCCACTGTTGTAACGAGACTGTAGAGAATCGAACCCGGAATCC
CTGCTCATTGATTGGGCGATATCTGTTAAAAAATGCAAACATGGGCGTAG
AGTCATCGCCAACACCCTAACTAACATGTGACCATGGAATTATTACAGAG
ACTCTGGATGAACATGAATGAAATGGTGGAGAGTTGAGTATTGTCGTCCA
ATTCAGAAAACAATCAATGTACAACCTTTGTCCGCAAATGACAACTGTCA
TGGCGGCTCCAAAGACTCTGATTTTGAAAAATGATACTTTTATTTCTAAA
AAGTTCTCTATCTATTTCTATTTTTATTTTTACTGGCCAAAATTTTTAAA
GTAAATGTTATAATAGCAAGCGGATGCATTTATTTCCCTACGTTGAGGCT
ATTTAGAAATGTTTTTAATGAACCTCGGGACTTTTATTCCCAAATCACCC
TCCAAACCATGTTAAATAGTACTAAATACTGCGTTGCGTTAAAAAGATAA
ACTAGACATACAC

Coding sequence (CDS) from alignment at sc0000104_pilon:702154..703466-

>MSTRG.13280.2.p1 ID=MSTRG.13280.2.p1|Name=MSTRG.13280.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=792bp|location=Sequence derived from alignment at sc0000104_pilon:702154..703466- (Clytia hemisphaerica_ch_hm2_pilon)
GTAGAAGAGAAGAAGAAGTTCACAACCCTTTTAAGAAGGTTTTTCAAAAA
ACATTAAAGAGCTACAAAAGAGCGGGCTGTGCACACGAGGAACTTGGAAG
AAATAACGCACCTACTGGAAACTTTTAAAAAACAAAATACAAAGAAACAA
GAAACTATAGACGAACAAAATCAACACATTGAGAATCTGAAAAACTTATC
GGACGAAGAAAAAAAGATAGCTGAAGAAGCTTTGGCTCAAATCGATAAGT
TGAAATATGATTTGGGAGAATCCAAGAGTGATCAACGTAGCTTAGAATCA
CAATTAGAAGAATTGAAGATACAACAACTTGAAACAGTACGGCATTTCAA
GGATCTGTTGAGACAGCAGGGACAACTGACAGGAAAAAGGCAACCGGTAG
AAGAGAAGAAGAAGTTCACAACCCTTTTAAGAAGGTTTTTCAAAAAACAT
TAAAGAGCTACAAAAGAGCGGGCTGTGCACACGAGGAACTTGGAAGAAAT
AACGCACCTACTGGAAACTTTTAAAAAACAAAATACAAAGAAACAAGAAA
CTATAGACGAACAAAATCAACACATTGAGAATCTGAAAAACTTATCGGAC
GAAGAAAAAAAGATAGCTGAAGAAGCTTTGGCTCAAATCGATAAGTTGAA
ATATGATTTGGGAGAATCCAAGAGTGATCAACGTAGCTTAGAATCACAAT
TAGAAGAATTGAAGATACAACAACTTGAAACAGTACGGCATTTCAAGGAT
CTGTTGAGACAGCAGGGACAACTGACAGGAAAAAGGCAACCG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.13280MSTRG.13280Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13280.2.p1.exon2MSTRG.13280.2.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13280.2.p1.exon1MSTRG.13280.2.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13280.2.p1MSTRG.13280.2.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000104_pilongenomesc0000104_pilon:702154..703466 -