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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000006_pilon:1848061..1851667+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.1328.2.p1 ID=MSTRG.1328.2.p1|Name=MSTRG.1328.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3607bp|location=Sequence derived from alignment at sc0000006_pilon:1848061..1851667+ (Clytia hemisphaerica_ch_hm2_pilon)
TGGAAACATTATAAATCGTCGGTTTAATGAACTTACTCAACATGGCTGAC
GTCTTGGAGAATAATGTGTTTTCAACGCGTAAAAGATCACATACAGAAAG
TACAGagacaaatgaaaatgacaGACCGCGATCAAAGAGACAGAGTCCAA
CAAGCTCGACtggtatttatattttattcttCTTTAACTTGGGAAAACTA
TTTGGAAACTATAGTTTGGTCTATTTGTAGCTGCCACTGCATATGTCAGC
TATTTTTTCCTAGTCGATTCCTCCTACAAGCTTCTATTGTTTCTTGTTCA
CGTTCAAGATTTGGCAAGGTTTTTAGTTTGAACTAAATTCATCTAAGAAG
CATGAATATGAACGAGTAAAACAATCTTGACCTCAGATAAGGTCAGGAAA
TATAGTCACAGTTCAAGGTCTGTGTCTACATAAAAGTCAGCAAGATGATC
TTATAACTGATTACAGAAGTTATGAATGCTGCGTTAATTGAATTATCTGG
ATAATGGGTACCTAATCCAATAAAATTATGTCTTTGATTCCGTATTAAAA
CCTATTAGAATTGTCATGTTGACCATCAAAGTATAAAATCAAACTTTAAA
TTGATAGATTTAAActtaattttctcaaattttgctcAACTTTTCCGAAT
TACTTGAAATCATCGATATGCTAACAATAACAAGGGaaggaaaatattct
tatttctcACTGAATTACGAATTCTAGGTGCGGCCTGTAGGGCAGCTTTT
ATCTTTGAATAGCAGATTGAACAATAAGCTAAATTCTTTGGCAGTAAGAG
GTTTTCTGATCAATGTTTTGAAGCTTAAAGAGAATTATTGctctcttttt
tttcattttggttaGAAAATAGTGTCTTTCTCTCAATCAAatcattcaaa
aattgaataaaatcacaaaatcgTGCAATTATATTTTACATCATGCAATT
TTATGTGGACAGGTTTTTATGCACGGCATAAATTAAAGGATAATTTACAG
GTCATTCTATGTAGGCTCATCTACCTAGATGGAATGATCATCAATGAACC
TTATAAAACGATATTAACTTCCGTCACTCATTCTAATTTATTTGCATTAG
TTGTCTTGATTTGTCACTTTCTATTAAATCCTAGTCAAAATTGGTCGCTG
CTAAGTTGAAACCTTGTCGTAACAGGATATTAGGCCTTCCACAATATTTA
TCTTAACTGTTTCAATAACTTTTTCATCCCAATAACTTGTTTTTCCTACT
TAACTTCAATTCCTTCAATAAATAAAcatcattcttttgttttctttcct
ttacAGAAGCGCTACCATTACTGAAGATTTTGATCCCGAATTACGCTGCG
GGCGCCATCATTGGAAAAGGAGGCACAAACATAGGTGATTTACAGTCTCA
ATATGGTGCCAAAATCAGGTTGTCGCCGAGCAGAGAGTTTTATCCCGGCA
CTGAGGAAAGAATTGTCGTTTTAACTGGCGAAGTCAATCAAATTATCGAC
CTGAATAACTACATTATTGATAAAGTGCACATTGACGCGACCGAGGGGCC
TGGGGCTAAATTACGGGATGAAGAACGCggacaaaaagtcaaaatagtcG
TTCCGAATGCCACAGCTGGACTTGTGATCGGCCGAGGTGGGTCCACCATC
AAGGCCCTGCAGGAAGAAACGGGAGCTAAAATAATGATTTCCGGACGTGA
CGAAGCTAAAGTACCGGGCGAACGGATTATCACGATAAGTGGAAATACGG
ATCAACGGATCGAGGCTGCGCAGAAAGTTGTTGCCAAGGTAGCAGCCGAC
GCTGAAAATATGGCAAATAAGAATTTGACGTATTCTTCGACGCAAGTACG
TAACGGATACGGTAATAAACATTTGGAAATGGGTCCAGTCACCCTTGGTG
GTGTCTCATCACTTCAATCAGTTATCGGAAGTTTGCAAAGTCAACATTCG
ATGAAAACAAGTCAAAATATCTTATCGTCAATTGCTCAAAATCCTATTTC
TGCATTGCAACAAAGCGGACTTGCCAACCAATTAGGTTTAAGTAGCACCA
TGTCAGGACTAACAGCTGGGATACCAGGCACTACATCTCTAGCTGCTTTA
ACAGGTGCCACCACTATGGGTAGCCTAGTAGCAAGTATTAAAACTCAAGT
CACAATACAAATGGAAATCCCTGACATCCTAGTCGGTGCTATACTCGGCA
AGCAAGGAAAAACTGTACACGAATTTATCCAGTTCAGTGGTGCTAAAATC
CAGTTTTCAGCCAAGAACGATTTTGCACCGGGAACTACAGATCGTATTTT
GACCATTCAAGGCGATGTAAATCAAACTCAGATTGCATACTTTCTTATAA
ATCAGAAGATAGTTCAAGCGGAGAGTGAGCTCGCTTCAGGAATACAAAGG
CATTGATTTCTCTTGTCTTTAGTTCCCTTACCCCTCTCGTTGTTATTCTT
GTATATTCCtttttttGAGACAAACTATCCATCATACCTGTCATGTCGCT
CGCTACCTTTCATTTTCTCCACTGTTTCTTCTTCATATTTTGTTCACTCG
TTTACGTCATCGTTGTTGCCGTCACGTGACTTGAACGTCATcaatcaaca
aaacaaaactatcaaaaaaactatatttcataaaaacgattttttttatt
atatttcttCATATCGTGTCATGATGCTAGTCAAATATACACCCTCGAAG
TTAAAGAATTGAACTCCAAAAACTATACATCTTGCAATTTCCTTTTCCTC
ATGAGGTCTCGCGTCGACATATCTTCatgtaaataaaattatttgacTAG
CATCATGTCTGTTTCATTATAGtaacattttttattcataaaaaaccttt
atttgttcatatttttacgcatttttagaatttgtgtTCATGCAGTACAC
gctaaactgaaaaaaaaaattcagctttcaaaaagcatttcaCATTAAAA
TGCTCCCATCCTCCTACCATCTTACCTACCTCTATCACACAAATCCAATG
AACCATCACCACGACATCACGTGACCTGTAAATGCACCGTCATTTTGCAC
TACGTAACCATTACGTAACCAAATCAAACATTGCATGAATGTTATATTTT
GTTGCATGCGTGAAAGCACATTCTATTATAACAAAAAACATTACATTATT
GTGTTTTTCTCCATATTTTCATTAGTATATTAACAGTTCATTTCATATAT
CATTTAAAAGagaaccattcaaaaagtacgtctCCGAACAAACTATTCAA
ATGGCATGTTCAGTGCCCAGGGCCCTTCAGCCCCAAGTCATTTATTTAAA
GGCAGGCACGACCCACCGATTGCGGCagattttttctaaacattcTCAAA
CTCCCTTCGTCGTCGGTAAAATTGCCGTCATTAATGGAGTCGGATtcaaa
aagcttccgtcgtgtcTAAGAAGTGGACCCCACCCAACTTAAAAGGGGTA
TACTTCTTTTTGAATGGTTTCCAAATATCGTGTTTTTCATCGAAgtcatt
ttttttcgatttcttcaTTATTAtaatcaacatttttttctcaaacgaca
aaaatattattaaccAATCATATTCGTGACATAGTAACTTTCCATTCTTA
GTGTTCC Coding sequence (CDS) from alignment at sc0000006_pilon:1848061..1851667+ >MSTRG.1328.2.p1 ID=MSTRG.1328.2.p1|Name=MSTRG.1328.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3897bp|location=Sequence derived from alignment at sc0000006_pilon:1848061..1851667+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACTTACTCAACATGGCTGACGTCTTGGAGAATAATGTGTTTTCAAC
GCGTAAAAGATCACATACAGAAAGTACAGagacaaatgaaaatgacaGAC
CGCGATCAAAGAGACAGAGTCCAACAAGCTCGACtgAAGCGCTACCATTA
CTGAAGATTTTGATCCCGAATTACGCTGCGGGCGCCATCATTGGAAAAGG
AGGCACAAACATAGGTGATTTACAGTCTCAATATGGTGCCAAAATCAGGT
TGTCGCCGAGCAGAGAGTTTTATCCCGGCACTGAGGAAAGAATTGTCGTT
TTAACTGGCGAAGTCAATCAAATTATCGACCTGAATAACTACATTATTGA
TAAAGTGCACATTGACGCGACCGAGGGGCCTGGGGCTAAATTACGGGATG
AAGAACGCggacaaaaagtcaaaatagtcGTTCCGAATGCCACAGCTGGA
CTTGTGATCGGCCGAGGTGGGTCCACCATCAAGGCCCTGCAGGAAGAAAC
GGGAGCTAAAATAATGATTTCCGGACGTGACGAAGCTAAAGTACCGGGCG
AACGGATTATCACGATAAGTGGAAATACGGATCAACGGATCGAGGCTGCG
CAGAAAGTTGTTGCCAAGGTAGCAGCCGACGCTGAAAATATGGCAAATAA
GAATTTGACGTATTCTTCGACGCAAGTACGTAACGGATACGGTAATAAAC
ATTTGGAAATGGGTCCAGTCACCCTTGGTGGTGTCTCATCACTTCAATCA
GTTATCGGAAGTTTGCAAAGTCAACATTCGATGAAAACAAGTCAAAATAT
CTTATCGTCAATTGCTCAAAATCCTATTTCTGCATTGCAACAAAGCGGAC
TTGCCAACCAATTAGGTTTAAGTAGCACCATGTCAGGACTAACAGCTGGG
ATACCAGGCACTACATCTCTAGCTGCTTTAACAGGTGCCACCACTATGGG
TAGCCTAGTAGCAAGTATTAAAACTCAAGTCACAATACAAATGGAAATCC
CTGACATCCTAGTCGGTGCTATACTCGGCAAGCAAGGAAAAACTGTACAC
GAATTTATCCAGTTCAGTGGTGCTAAAATCCAGTTTTCAGCCAAGAACGA
TTTTGCACCGGGAACTACAGATCGTATTTTGACCATTCAAGGCGATGTAA
ATCAAACTCAGATTGCATACTTTCTTATAAATCAGAAGATAGTTCAAGCG
GAGAGTGAGCTCGCTTCAGGAATACAAAGaatttgtgtTCATGCAGTACA
CgctaaactgaaaaaaaaaattcagctttcaaaaagcatttcaCATTAAA
TGAACTTACTCAACATGGCTGACGTCTTGGAGAATAATGTGTTTTCAACG
CGTAAAAGATCACATACAGAAAGTACAGagacaaatgaaaatgacaGACC
GCGATCAAAGAGACAGAGTCCAACAAGCTCGACtgAAGCGCTACCATTAC
TGAAGATTTTGATCCCGAATTACGCTGCGGGCGCCATCATTGGAAAAGGA
GGCACAAACATAGGTGATTTACAGTCTCAATATGGTGCCAAAATCAGGTT
GTCGCCGAGCAGAGAGTTTTATCCCGGCACTGAGGAAAGAATTGTCGTTT
TAACTGGCGAAGTCAATCAAATTATCGACCTGAATAACTACATTATTGAT
AAAGTGCACATTGACGCGACCGAGGGGCCTGGGGCTAAATTACGGGATGA
AGAACGCggacaaaaagtcaaaatagtcGTTCCGAATGCCACAGCTGGAC
TTGTGATCGGCCGAGGTGGGTCCACCATCAAGGCCCTGCAGGAAGAAACG
GGAGCTAAAATAATGATTTCCGGACGTGACGAAGCTAAAGTACCGGGCGA
ACGGATTATCACGATAAGTGGAAATACGGATCAACGGATCGAGGCTGCGC
AGAAAGTTGTTGCCAAGGTAGCAGCCGACGCTGAAAATATGGCAAATAAG
AATTTGACGTATTCTTCGACGCAAGTACGTAACGGATACGGTAATAAACA
TTTGGAAATGGGTCCAGTCACCCTTGGTGGTGTCTCATCACTTCAATCAG
TTATCGGAAGTTTGCAAAGTCAACATTCGATGAAAACAAGTCAAAATATC
TTATCGTCAATTGCTCAAAATCCTATTTCTGCATTGCAACAAAGCGGACT
TGCCAACCAATTAGGTTTAAGTAGCACCATGTCAGGACTAACAGCTGGGA
TACCAGGCACTACATCTCTAGCTGCTTTAACAGGTGCCACCACTATGGGT
AGCCTAGTAGCAAGTATTAAAACTCAAGTCACAATACAAATGGAAATCCC
TGACATCCTAGTCGGTGCTATACTCGGCAAGCAAGGAAAAACTGTACACG
AATTTATCCAGTTCAGTGGTGCTAAAATCCAGTTTTCAGCCAAGAACGAT
TTTGCACCGGGAACTACAGATCGTATTTTGACCATTCAAGGCGATGTAAA
TCAAACTCAGATTGCATACTTTCTTATAAATCAGAAGATAGTTCAAGCGG
AGAGTGAGCTCGCTTCAGGAATACAAAGaatttgtgtTCATGCAGTACAC
gctaaactgaaaaaaaaaattcagctttcaaaaagcatttcaCATTAAAT
GAACTTACTCAACATGGCTGACGTCTTGGAGAATAATGTGTTTTCAACGC
GTAAAAGATCACATACAGAAAGTACAGagacaaatgaaaatgacaGACCG
CGATCAAAGAGACAGAGTCCAACAAGCTCGACtgAAGCGCTACCATTACT
GAAGATTTTGATCCCGAATTACGCTGCGGGCGCCATCATTGGAAAAGGAG
GCACAAACATAGGTGATTTACAGTCTCAATATGGTGCCAAAATCAGGTTG
TCGCCGAGCAGAGAGTTTTATCCCGGCACTGAGGAAAGAATTGTCGTTTT
AACTGGCGAAGTCAATCAAATTATCGACCTGAATAACTACATTATTGATA
AAGTGCACATTGACGCGACCGAGGGGCCTGGGGCTAAATTACGGGATGAA
GAACGCggacaaaaagtcaaaatagtcGTTCCGAATGCCACAGCTGGACT
TGTGATCGGCCGAGGTGGGTCCACCATCAAGGCCCTGCAGGAAGAAACGG
GAGCTAAAATAATGATTTCCGGACGTGACGAAGCTAAAGTACCGGGCGAA
CGGATTATCACGATAAGTGGAAATACGGATCAACGGATCGAGGCTGCGCA
GAAAGTTGTTGCCAAGGTAGCAGCCGACGCTGAAAATATGGCAAATAAGA
ATTTGACGTATTCTTCGACGCAAGTACGTAACGGATACGGTAATAAACAT
TTGGAAATGGGTCCAGTCACCCTTGGTGGTGTCTCATCACTTCAATCAGT
TATCGGAAGTTTGCAAAGTCAACATTCGATGAAAACAAGTCAAAATATCT
TATCGTCAATTGCTCAAAATCCTATTTCTGCATTGCAACAAAGCGGACTT
GCCAACCAATTAGGTTTAAGTAGCACCATGTCAGGACTAACAGCTGGGAT
ACCAGGCACTACATCTCTAGCTGCTTTAACAGGTGCCACCACTATGGGTA
GCCTAGTAGCAAGTATTAAAACTCAAGTCACAATACAAATGGAAATCCCT
GACATCCTAGTCGGTGCTATACTCGGCAAGCAAGGAAAAACTGTACACGA
ATTTATCCAGTTCAGTGGTGCTAAAATCCAGTTTTCAGCCAAGAACGATT
TTGCACCGGGAACTACAGATCGTATTTTGACCATTCAAGGCGATGTAAAT
CAAACTCAGATTGCATACTTTCTTATAAATCAGAAGATAGTTCAAGCGGA
GAGTGAGCTCGCTTCAGGAATACAAAGaatttgtgtTCATGCAGTACACg
ctaaactgaaaaaaaaaattcagctttcaaaaagcatttcaCATTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000006_pilon | genome | sc0000006_pilon:1848061..1851667 + |
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