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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000006_pilon:1848002..1851667+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.1328.1.p1 ID=MSTRG.1328.1.p1|Name=MSTRG.1328.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3666bp|location=Sequence derived from alignment at sc0000006_pilon:1848002..1851667+ (Clytia hemisphaerica_ch_hm2_pilon)
tatgttctttttatatatttttagacGTACTATAAAACACAAGAGAGAGT
ACTATAGATTGGAAACATTATAAATCGTCGGTTTAATGAACTTACTCAAC
ATGGCTGACGTCTTGGAGAATAATGTGTTTTCAACGCGTAAAAGATCACA
TACAGAAAGTACAGagacaaatgaaaatgacaGACCGCGATCAAAGAGAC
AGAGTCCAACAAGCTCGACtggtatttatattttattcttCTTTAACTTG
GGAAAACTATTTGGAAACTATAGTTTGGTCTATTTGTAGCTGCCACTGCA
TATGTCAGCTATTTTTTCCTAGTCGATTCCTCCTACAAGCTTCTATTGTT
TCTTGTTCACGTTCAAGATTTGGCAAGGTTTTTAGTTTGAACTAAATTCA
TCTAAGAAGCATGAATATGAACGAGTAAAACAATCTTGACCTCAGATAAG
GTCAGGAAATATAGTCACAGTTCAAGGTCTGTGTCTACATAAAAGTCAGC
AAGATGATCTTATAACTGATTACAGAAGTTATGAATGCTGCGTTAATTGA
ATTATCTGGATAATGGGTACCTAATCCAATAAAATTATGTCTTTGATTCC
GTATTAAAACCTATTAGAATTGTCATGTTGACCATCAAAGTATAAAATCA
AACTTTAAATTGATAGATTTAAActtaattttctcaaattttgctcAACT
TTTCCGAATTACTTGAAATCATCGATATGCTAACAATAACAAGGGaagga
aaatattcttatttctcACTGAATTACGAATTCTAGGTGCGGCCTGTAGG
GCAGCTTTTATCTTTGAATAGCAGATTGAACAATAAGCTAAATTCTTTGG
CAGTAAGAGGTTTTCTGATCAATGTTTTGAAGCTTAAAGAGAATTATTGc
tctcttttttttcattttggttaGAAAATAGTGTCTTTCTCTCAATCAAa
tcattcaaaaattgaataaaatcacaaaatcgTGCAATTATATTTTACAT
CATGCAATTTTATGTGGACAGGTTTTTATGCACGGCATAAATTAAAGGAT
AATTTACAGGTCATTCTATGTAGGCTCATCTACCTAGATGGAATGATCAT
CAATGAACCTTATAAAACGATATTAACTTCCGTCACTCATTCTAATTTAT
TTGCATTAGTTGTCTTGATTTGTCACTTTCTATTAAATCCTAGTCAAAAT
TGGTCGCTGCTAAGTTGAAACCTTGTCGTAACAGGATATTAGGCCTTCCA
CAATATTTATCTTAACTGTTTCAATAACTTTTTCATCCCAATAACTTGTT
TTTCCTACTTAACTTCAATTCCTTCAATAAATAAAcatcattcttttgtt
ttctttcctttacAGAAGCGCTACCATTACTGAAGATTTTGATCCCGAAT
TACGCTGCGGGCGCCATCATTGGAAAAGGAGGCACAAACATAGGTGATTT
ACAGTCTCAATATGGTGCCAAAATCAGGTTGTCGCCGAGCAGAGAGTTTT
ATCCCGGCACTGAGGAAAGAATTGTCGTTTTAACTGGCGAAGTCAATCAA
ATTATCGACCTGAATAACTACATTATTGATAAAGTGCACATTGACGCGAC
CGAGGGGCCTGGGGCTAAATTACGGGATGAAGAACGCggacaaaaagtca
aaatagtcGTTCCGAATGCCACAGCTGGACTTGTGATCGGCCGAGGTGGG
TCCACCATCAAGGCCCTGCAGGAAGAAACGGGAGCTAAAATAATGATTTC
CGGACGTGACGAAGCTAAAGTACCGGGCGAACGGATTATCACGATAAGTG
GAAATACGGATCAACGGATCGAGGCTGCGCAGAAAGTTGTTGCCAAGGTA
GCAGCCGACGCTGAAAATATGGCAAATAAGAATTTGACGTATTCTTCGAC
GCAAGTACGTAACGGATACGGTAATAAACATTTGGAAATGGGTCCAGTCA
CCCTTGGTGGTGTCTCATCACTTCAATCAGTTATCGGAAGTTTGCAAAGT
CAACATTCGATGAAAACAAGTCAAAATATCTTATCGTCAATTGCTCAAAA
TCCTATTTCTGCATTGCAACAAAGCGGACTTGCCAACCAATTAGGTTTAA
GTAGCACCATGTCAGGACTAACAGCTGGGATACCAGGCACTACATCTCTA
GCTGCTTTAACAGGTGCCACCACTATGGGTAGCCTAGTAGCAAGTATTAA
AACTCAAGTCACAATACAAATGGAAATCCCTGACATCCTAGTCGGTGCTA
TACTCGGCAAGCAAGGAAAAACTGTACACGAATTTATCCAGTTCAGTGGT
GCTAAAATCCAGTTTTCAGCCAAGAACGATTTTGCACCGGGAACTACAGA
TCGTATTTTGACCATTCAAGGCGATGTAAATCAAACTCAGATTGCATACT
TTCTTATAAATCAGAAGATAGTTCAAGCGGAGAGTGAGCTCGCTTCAGGA
ATACAAAGGCATTGATTTCTCTTGTCTTTAGTTCCCTTACCCCTCTCGTT
GTTATTCTTGTATATTCCtttttttGAGACAAACTATCCATCATACCTGT
CATGTCGCTCGCTACCTTTCATTTTCTCCACTGTTTCTTCTTCATATTTT
GTTCACTCGTTTACGTCATCGTTGTTGCCGTCACGTGACTTGAACGTCAT
caatcaacaaaacaaaactatcaaaaaaactatatttcataaaaacgatt
ttttttattatatttcttCATATCGTGTCATGATGCTAGTCAAATATACA
CCCTCGAAGTTAAAGAATTGAACTCCAAAAACTATACATCTTGCAATTTC
CTTTTCCTCATGAGGTCTCGCGTCGACATATCTTCatgtaaataaaatta
tttgacTAGCATCATGTCTGTTTCATTATAGtaacattttttattcataa
aaaacctttatttgttcatatttttacgcatttttagaatttgtgtTCAT
GCAGTACACgctaaactgaaaaaaaaaattcagctttcaaaaagcatttc
aCATTAAAATGCTCCCATCCTCCTACCATCTTACCTACCTCTATCACACA
AATCCAATGAACCATCACCACGACATCACGTGACCTGTAAATGCACCGTC
ATTTTGCACTACGTAACCATTACGTAACCAAATCAAACATTGCATGAATG
TTATATTTTGTTGCATGCGTGAAAGCACATTCTATTATAACAAAAAACAT
TACATTATTGTGTTTTTCTCCATATTTTCATTAGTATATTAACAGTTCAT
TTCATATATCATTTAAAAGagaaccattcaaaaagtacgtctCCGAACAA
ACTATTCAAATGGCATGTTCAGTGCCCAGGGCCCTTCAGCCCCAAGTCAT
TTATTTAAAGGCAGGCACGACCCACCGATTGCGGCagattttttctaaac
attcTCAAACTCCCTTCGTCGTCGGTAAAATTGCCGTCATTAATGGAGTC
GGATtcaaaaagcttccgtcgtgtcTAAGAAGTGGACCCCACCCAACTTA
AAAGGGGTATACTTCTTTTTGAATGGTTTCCAAATATCGTGTTTTTCATC
GAAgtcattttttttcgatttcttcaTTATTAtaatcaacatttttttct
caaacgacaaaaatattattaaccAATCATATTCGTGACATAGTAACTTT
CCATTCTTAGTGTTCC Coding sequence (CDS) from alignment at sc0000006_pilon:1848002..1851667+ >MSTRG.1328.1.p1 ID=MSTRG.1328.1.p1|Name=MSTRG.1328.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2472bp|location=Sequence derived from alignment at sc0000006_pilon:1848002..1851667+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACTTACTCAACATGGCTGACGTCTTGGAGAATAATGTGTTTTCAAC
GCGTAAAAGATCACATACAGAAAGTACAGagacaaatgaaaatgacaGAC
CGCGATCAAAGAGACAGAGTCCAACAAGCTCGACtgAAGCGCTACCATTA
CTGAAGATTTTGATCCCGAATTACGCTGCGGGCGCCATCATTGGAAAAGG
AGGCACAAACATAGGTGATTTACAGTCTCAATATGGTGCCAAAATCAGGT
TGTCGCCGAGCAGAGAGTTTTATCCCGGCACTGAGGAAAGAATTGTCGTT
TTAACTGGCGAAGTCAATCAAATTATCGACCTGAATAACTACATTATTGA
TAAAGTGCACATTGACGCGACCGAGGGGCCTGGGGCTAAATTACGGGATG
AAGAACGCggacaaaaagtcaaaatagtcGTTCCGAATGCCACAGCTGGA
CTTGTGATCGGCCGAGGTGGGTCCACCATCAAGGCCCTGCAGGAAGAAAC
GGGAGCTAAAATAATGATTTCCGGACGTGACGAAGCTAAAGTACCGGGCG
AACGGATTATCACGATAAGTGGAAATACGGATCAACGGATCGAGGCTGCG
CAGAAAGTTGTTGCCAAGGTAGCAGCCGACGCTGAAAATATGGCAAATAA
GAATTTGACGTATTCTTCGACGCAAGTACGTAACGGATACGGTAATAAAC
ATTTGGAAATGGGTCCAGTCACCCTTGGTGGTGTCTCATCACTTCAATCA
GTTATCGGAAGTTTGCAAAGTCAACATTCGATGAAAACAAGTCAAAATAT
CTTATCGTCAATTGCTCAAAATCCTATTTCTGCATTGCAACAAAGCGGAC
TTGCCAACCAATTAGGTTTAAGTAGCACCATGTCAGGACTAACAGCTGGG
ATACCAGGCACTACATCTCTAGCTGCTTTAACAGGTGCCACCACTATGGG
TAGCCTAGTAGCAAGTATTAAAACTCAAGTCACAATACAAATGGAAATCC
CTGACATCCTAGTCGGTGCTATACTCGGCAAGCAAGGAAAAACTGTACAC
GAATTTATCCAGTTCAGTGGTGCTAAAATCCAGTTTTCAGCCAAGAACGA
TTTTGCACCGGGAACTACAGATCGTATTTTGACCATTCAAGGCGATGTAA
ATCAAACTCAGATTGCATACTTTCTTATAAATCAGAAGATAGTTCAAGCG
GAGAGTGAGCTCGCTTCAGGAATACAAAGGCATTGAATGAACTTACTCAA
CATGGCTGACGTCTTGGAGAATAATGTGTTTTCAACGCGTAAAAGATCAC
ATACAGAAAGTACAGagacaaatgaaaatgacaGACCGCGATCAAAGAGA
CAGAGTCCAACAAGCTCGACtgAAGCGCTACCATTACTGAAGATTTTGAT
CCCGAATTACGCTGCGGGCGCCATCATTGGAAAAGGAGGCACAAACATAG
GTGATTTACAGTCTCAATATGGTGCCAAAATCAGGTTGTCGCCGAGCAGA
GAGTTTTATCCCGGCACTGAGGAAAGAATTGTCGTTTTAACTGGCGAAGT
CAATCAAATTATCGACCTGAATAACTACATTATTGATAAAGTGCACATTG
ACGCGACCGAGGGGCCTGGGGCTAAATTACGGGATGAAGAACGCggacaa
aaagtcaaaatagtcGTTCCGAATGCCACAGCTGGACTTGTGATCGGCCG
AGGTGGGTCCACCATCAAGGCCCTGCAGGAAGAAACGGGAGCTAAAATAA
TGATTTCCGGACGTGACGAAGCTAAAGTACCGGGCGAACGGATTATCACG
ATAAGTGGAAATACGGATCAACGGATCGAGGCTGCGCAGAAAGTTGTTGC
CAAGGTAGCAGCCGACGCTGAAAATATGGCAAATAAGAATTTGACGTATT
CTTCGACGCAAGTACGTAACGGATACGGTAATAAACATTTGGAAATGGGT
CCAGTCACCCTTGGTGGTGTCTCATCACTTCAATCAGTTATCGGAAGTTT
GCAAAGTCAACATTCGATGAAAACAAGTCAAAATATCTTATCGTCAATTG
CTCAAAATCCTATTTCTGCATTGCAACAAAGCGGACTTGCCAACCAATTA
GGTTTAAGTAGCACCATGTCAGGACTAACAGCTGGGATACCAGGCACTAC
ATCTCTAGCTGCTTTAACAGGTGCCACCACTATGGGTAGCCTAGTAGCAA
GTATTAAAACTCAAGTCACAATACAAATGGAAATCCCTGACATCCTAGTC
GGTGCTATACTCGGCAAGCAAGGAAAAACTGTACACGAATTTATCCAGTT
CAGTGGTGCTAAAATCCAGTTTTCAGCCAAGAACGATTTTGCACCGGGAA
CTACAGATCGTATTTTGACCATTCAAGGCGATGTAAATCAAACTCAGATT
GCATACTTTCTTATAAATCAGAAGATAGTTCAAGCGGAGAGTGAGCTCGC
TTCAGGAATACAAAGGCATTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000006_pilon | genome | sc0000006_pilon:1848002..1851667 + |
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