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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000104_pilon:682732..687879+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13277.1.p1 ID=MSTRG.13277.1.p1|Name=MSTRG.13277.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5148bp|location=Sequence derived from alignment at sc0000104_pilon:682732..687879+ (Clytia hemisphaerica_ch_hm2_pilon)
ATAAACTGAGGCGGAGAGTCGattgtttttacataaaaataatCCTTTTA
TGGAAGTTCAAAAGATATCTCTTAAATTTCTTAACTCCTTGAATGTGCAT
CTGATAAAGCGAAGGCACATAAATAGAACATTTAACAATGCTCTTCATTC
AATAACTATCGCGATCTTGGATGTGAGGagttaaaaaaaagaagtgttGG
AGGATATTGAAAACATCAGTGAAGATTTCTAAAGGTATCtcatgaaattt
tctaaaatattttagtCCTAGCTAGCGTAATGAATTATGGTAAAGACTCT
TATCTCgggaaagggggggggggtgttgatGGCCTGAGCTTTCAATCGGA
ataaaatctcgaaattttcttatattttcaagttttctaTGAgggggggg
gcaaacttttaatttttatgactAAACCTGGGACAGCGGCACAAgaccaa
taacttttgattataTACACTACTGCATTATAGCAAAAATTCGGTAGAGA
TTAACATTATTACAGTCTAGCGTTCAAAATCTAATGTTTTCACACCACAT
TTCAAACTTGGAATCGATTTGGTGAGCCTCCTATTCCATTTCAACACCCT
AACAGATCCAATCCCTCCCTCCTTGCCGGGGCAAATAAGCAATGTCATTG
AAGTTTATATTTCGatactaatagaccttttcataaattacgccaCGAAC
AACACTTGcttcgtattcaaacaattaccatgtcccttgagacattaaat
gtttttttatgaatagaaagtaggtttaataaaatccgctgggagtaaAT
CACAATGCCAATAATCTCAAAACGAGGTAATTGATGTTcataaccattga
gtttaaagcccgaagggctaattTAGAATCTCTAACATTTCCCAGGCgac
aaaaagtgaagccacttatttcccatccagaacgtgCCTAGAACGCGcca
caatcatgacgacggattgtatctagcggttcttttgttttgaggaatgt
tttttttttaatctagcgatcgattttactttcaatctgacgtttgtgta
aaaaccacacgcgggcgttctggatcggaaataagtggcttcatttccca
tccaggagtctcgagtctagcccttcgggtttggATGAcaatgttcgtaa
cgtaatttatgaacaGGTCTATTCATACGATTGCCAGACAATCTTGTTTC
CCGGGTGAACCTCTTATTTGAATTAATAATGAGATTAGCCCTGGAAGCCA
TTATATTTTTATCGCTAGTATGAGGcgattttcagaaaagattaagatat
ttttggaaagcaagTCCATTTACAGTTGACCCTTGGAATTGAACTCGtaa
ctgagaattagttcgaactatagagagatttgaataatatatggtcaaaa
tatcgagagtttgattttttttggtaaaaggaaaaaaaagagagcGACAA
ACCCGGGGAAGGGGTTATATGGTTGGAGAATGTCGGGTACGTGTGGATCC
GACCTCTGAAAGCTGACCCGTAGAGAGACTAACTCAACTTTTACTTTGCT
TTTGTAACATAACATTCCAAGATTACGCAATCTTTTAAGGGcttctgacc
atagtcagaaagtTGGTTAGTCGATTTGTAAATGAAGCTTTTGTTTAGGG
TAtcttttaatgggtaattaatctttttgtttcaaagtttctTCAAAAGT
TTACATTAAAAAATAGGGATGAAGAATTGTTGAAGAATTGGgcaaaaacc
actattttcaagattttgagacaaggaagcttttacaaaaattttccgaa
aatctatttttagttcGGGTAAATAATTCTAccgcaaaaagtttttcaaa
atgttttttcttcgtcgaaaataaggttttcaaagttgaaatactcttct
tcgcaaaagttcTCATTTTCTACGtggtaaatttttttcatcttgacatt
taaattttcgaatttaGGAATAATCGCCCCACCAAAATATTGTAtaacca
gggatatgttatagcggagctggatgaaggacgataattccttagcggat
tgcttctttgtcttttctattgtaaactgttcataatagaaatccatctc
tgtccccttgagtgttctgtttttataagaaaaatgaagcagacaaagta
ttcatgtagtatgtttgcacatattttgctatgatgttcccgcttttcat
caaaataatttttatagaaGATATcccaaaagcttctttgtaaatgaaat
ctatttttatcagcgtgtgttatgaatttgagaagctttcatgatttctc
tttaaagatttcggatgtaaatattttgacttgaaattttttccataatc
agacataccgatatgctatctgaaaatatcagttagaaagtgaggcacca
ttgagtttcaagcccgaagggctagaggtcaatctctaacctttctcagg
caagaaaaattgaagccttaaaatgtgcgccgtatttttgatgacggatt
gaatctagcaattcctttgtcttcgagtgatatatttttcgaaattaagc
ggtaaattttagtttcaatctgtcatttgtgtaaaaaccaggcgggtcgc
tcaaggccgcgcaactttggtaggatttgttggcttcaaatcctaccaaa
gagattgacctctagccttcggcttgaaactcaatgtgaggcaccccgcg
gtgtagcgcggtatttcaaatgaaaaagtactatttataatcttagagaa
gaaacttcttataactttactaatgaaaacaatgttttccatttttttaa
attgtctgtcaccaatgttttacagaccctcttgataattaaaagttttt
aatcgtgaacgataaatgcagcagcagaatcattggctaagaggaaatcc
aaatttcacgagtttgtaattaaaaagttaaatttcatatcaaattttaa
tgtcagggacagagatagaacaaggcttttttaaatgtgcgttatccagc
tccgctataacatatccctggtatAATGTGTCATAGTTTTGTGGACTACT
TTAaacagaaatttatattttgtacgtgtaaaaaaaaatcactatggtca
gagcccttaaagttattttaaaaacatttgtgGGCTCAACTTGTTTGATA
AGGTAGTACTTAATTTTTAGGTACATTACGATTTGAGAAGCGCAAACGAT
GTACGCCTTGAAGCTGAAGACAGCGCTGAGAAATGCAGTATCAATCACTT
CAAAGAGATGGTCAAGCGGCGCCATACCCTTTGATCCTACCATCGTCCTT
GGCAATGTTGTGCATCCTAAGAAATTTGCACCATTAAAAAACATTGCAGT
CTATCAGCAAGAGATTGACGGAGAAGAAGATGCTATGCAGGATAACTTAC
GCGCAATAAGAAGCCTTCAGATGCTTGCTATAGAGCTTGGCTATAGTAAA
GAAGATAAAGCTAAAGACGCGAAGTTAAGCCAGTCAATGAAAATGCTGCA
CCAAAACGTGGATTCGGCTGCTACAAAGTATGCAGAGAAATTGCAAACAA
ATCTTCCCCTTATCAACAAGGAGAAGGCAAAGATTAGATTGATTGATGAT
CATGTTGAAACCCCTTTGGATTTCAACAAGTCTCTGATCAAAACAGATTT
ACCAATCAGCTCAAACACCATCAAGTTGAATGCTCAATATTTTTCATTCG
ACGATGAAAAGCAAGATAGCCAAACGACCattatgaaaatgaaatcattt
gtttCTGGAGAAGTGGATAGTATTTTTGACAGCAAAATCAGTGGAAAAGT
CTCAAATGCAGTCCAACAGCAGACAGCTCAACAACGCGAGGAACATTCAA
TAGTGGGAACTTTGGTCATCACAGCAACCTGTACTCACGCCAACGCGAGT
ATTTTTTCTCCACTTGTTATCGATGCAGACAAAGCAGTAACGTCTTGGAA
CGCATGCTATGAAGACGATCTAATGGTTGGTGACATGGTTGAAATGCAAG
GATATGTCAGTGAAACACCTAAAACTGACAAACTCAAAGTTCTTGAACCT
GCttcagacaatgaagagactgCGCAAGAAAAAGACGTATCAATAACACG
ACAATTGAAATTGGTTACAGGCGCAACTTATGGTTCATGTTTTGTTGGTA
TGGTTCACATGTTGAAAAGCACATCGACAACATCTAGCCAAGATATGTTG
GCAACAGCTGAATCATTAGAATCTAACTTCAAAATTGCTGCTTGGTTTAC
TGACATGGAAGGAGGCTTTGGAATAGATTcatcattttccaaaaatctgc
AAGCTCTGCTGAGTCAGCAATCAATCTTATCCCATGTTAGTTTGGTATGC
GAGGGCCTTATCCCAACAATAACAAGCGAGAAGATCGCAATTGGTGTGAA
AGCCTTTAGTGAATTCGATCCTGCATCCACCATGAAACAATTGGCAACTT
TGCACAATGAAACCCAGAATGCGAATCAAACCGTAAGCAGTGCTGCTGAT
AATGCTCGTGAAGGAAAGAAAGTAACAGAGCTGCGTGCAACTGACGTCAA
AAGCACCATGGCTGCTCTTAGTGAGGTCGATGATGGAAAGAATAGCGTTT
TGACTGTCAACACAATTATGACAGCTATGGATGAGTACACAAAGGGAGCG
AAAGAAGGAAAGATTGGTATTCCAATCAATTTCTTCTTGAAGAGTCTTAC
CAAAGCAGATATCGCAAAAATGTGGTTATCCAAATACTTCACTAAGGAAg
agcaagagaagaaagaagACAAACAAGTAGCCCATGTAACAGCACACCCg
gaagtgaaaacccatgtaaCAGCAACCCCGAAAGTGGCACCAAAGTAGCA
GTACCTAACACTTAGcggcaaatcaaaaaaaacataatggAAGATAAATA
ATCGATTATATTGATATATTGATGGTACGATgtgtagaaataatttttaa
ggtAATACAAATAATTTATGATTcttaattgttaaataattatGATTATA
ATATACATGTACGCAAAAACAGCCATATAATATTTCCTGATATACCACGG
CTATTATACTACGgtacattttttttcaagtttgattttttatcgctctt
gttgtttatcaaagaaattacaCTTTGGGTAACTtgacccgtaaaaca Coding sequence (CDS) from alignment at sc0000104_pilon:682732..687879+ >MSTRG.13277.1.p1 ID=MSTRG.13277.1.p1|Name=MSTRG.13277.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1650bp|location=Sequence derived from alignment at sc0000104_pilon:682732..687879+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTACGCCTTGAAGCTGAAGACAGCGCTGAGAAATGCAGTATCAATCAC
TTCAAAGAGATGGTCAAGCGGCGCCATACCCTTTGATCCTACCATCGTCC
TTGGCAATGTTGTGCATCCTAAGAAATTTGCACCATTAAAAAACATTGCA
GTCTATCAGCAAGAGATTGACGGAGAAGAAGATGCTATGCAGGATAACTT
ACGCGCAATAAGAAGCCTTCAGATGCTTGCTATAGAGCTTGGCTATAGTA
AAGAAGATAAAGCTAAAGACGCGAAGTTAAGCCAGTCAATGAAAATGCTG
CACCAAAACGTGGATTCGGCTGCTACAAAGTATGCAGAGAAATTGCAAAC
AAATCTTCCCCTTATCAACAAGGAGAAGGCAAAGATTAGATTGATTGATG
ATCATGTTGAAACCCCTTTGGATTTCAACAAGTCTCTGATCAAAACAGAT
TTACCAATCAGCTCAAACACCATCAAGTTGAATGCTCAATATTTTTCATT
CGACGATGAAAAGCAAGATAGCCAAACGACCattatgaaaatgaaatcat
ttgtttCTGGAGAAGTGGATAGTATTTTTGACAGCAAAATCAGTGGAAAA
GTCTCAAATGCAGTCCAACAGCAGACAGCTCAACAACGCGAGGAACATTC
AATAGTGGGAACTTTGGTCATCACAGCAACCTGTACTCACGCCAACGCGA
GTATTTTTTCTCCACTTGTTATCGATGCAGACAAAGCAGTAACGTCTTGG
AACGCATGCTATGAAGACGATCTAATGGTTGGTGACATGGTTGAAATGCA
AGGATATGTCAGTGAAACACCTAAAACTGACAAACTCAAAGTTCTTGAAC
CTGCttcagacaatgaagagactgCGCAAGAAAAAGACGTATCAATAACA
CGACAATTGAAATTGGTTACAGGCGCAACTTATGGTTCATGTTTTGTTGG
TATGGTTCACATGTTGAAAAGCACATCGACAACATCTAGCCAAGATATGT
TGGCAACAGCTGAATCATTAGAATCTAACTTCAAAATTGCTGCTTGGTTT
ACTGACATGGAAGGAGGCTTTGGAATAGATTcatcattttccaaaaatct
gcAAGCTCTGCTGAGTCAGCAATCAATCTTATCCCATGTTAGTTTGGTAT
GCGAGGGCCTTATCCCAACAATAACAAGCGAGAAGATCGCAATTGGTGTG
AAAGCCTTTAGTGAATTCGATCCTGCATCCACCATGAAACAATTGGCAAC
TTTGCACAATGAAACCCAGAATGCGAATCAAACCGTAAGCAGTGCTGCTG
ATAATGCTCGTGAAGGAAAGAAAGTAACAGAGCTGCGTGCAACTGACGTC
AAAAGCACCATGGCTGCTCTTAGTGAGGTCGATGATGGAAAGAATAGCGT
TTTGACTGTCAACACAATTATGACAGCTATGGATGAGTACACAAAGGGAG
CGAAAGAAGGAAAGATTGGTATTCCAATCAATTTCTTCTTGAAGAGTCTT
ACCAAAGCAGATATCGCAAAAATGTGGTTATCCAAATACTTCACTAAGGA
AgagcaagagaagaaagaagACAAACAAGTAGCCCATGTAACAGCACACC
CggaagtgaaaacccatgtaaCAGCAACCCCGAAAGTGGCACCAAAGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000104_pilon | genome | sc0000104_pilon:682732..687879 + |
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