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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000104_pilon:610107..614466+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13271.1.p1 ID=MSTRG.13271.1.p1|Name=MSTRG.13271.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4360bp|location=Sequence derived from alignment at sc0000104_pilon:610107..614466+ (Clytia hemisphaerica_ch_hm2_pilon)
AAGTCATATGACAAATTACGTGTCCCCAGAACATTTTaataaaatgaaga
ttgaagaaaatatttgttatGGTGGCTTTAGTGAGTATTCTATTCtcatc
aaaatatatattttttctgctGTGAAAAAACATATCTTGTTTACTAATGT
ACTACTAAAATTCTACCTAAAGgttttaataaaattaaaaaaaaactgac
tttaaaATTCAGCATATACCGAAATAAGTGTTTGTCAAAAGTCAATGTTT
TGTTATTCTCATTCAATAATTTGTCATATGTCATTTTTTGACAGCAGGAC
TCtcgtttttattttgtcttcCTAGACAGATTTCTTAAAGATACAACTTC
TCTTTTATGAAAGTGACTTTCTATATCTTTTTTAACGCCCTTTAAAGGTT
CCAGCgtgatatttcaaaataataagaCTTTCAGCTTCAATTTAGAGTAC
TTTAAAGTCATTTCGTGAATTGTAAGTATATAAATGTGCTttctgaattt
cgaaaaaatgagtaattgaaagattttctacTCAAGTCATGAGGACTGAA
TTTAATGAGACAATTTATGAAGGTTGGATCATAGATGACGGATACTCAAA
AAGTAATACGGTGAACTTTTAATTAAATCATAATTTAGAATTTGGTAAAT
TTgacgaatttggcgaatttggcgaattttgtcaaaaattgcgAATTAAA
TCCCtgcgaaaatttcaaaaatcggtCATTCGCCAAACTTCTTTGTTAGT
TTGCATTTCTAAGTAAAATACCACGTATTTTTTAGTTTACCGGAGACTAA
CACCTtcccattcgccaaattaaatccccgctaaattttacaaaattgat
cattcgccaaatttaatttttgccaatcgccaaattaaatccacgccaaa
attaacCCACTTAATACAGTACCCTTAAGGGGACTAATTTATTTGGCGAG
CAACAAAGactctaaaaaaaaataatttggaaagaaactaaaaattaaat
acttttggaaggtaaaattttaaCTCTATTTCTACTTTACTATTTCTTCG
TAGATTATGACTTGTACAAGTACGGTACAATCATTTTATTCGTCTCGTGC
GTTATGGCATTGGTTGCAATCCATTTTATTTGCCCGTTGAGATGGAATCG
caacaaaattatcaaaacactCTCCAACATGAAGCAACGAACTCAAAGAT
CTGCCAAGAAAAAACGACGAAACTTCTTTGACACAAGAAGCATCAGTGCA
AACACTGAATTTGATTTCCAACCCGTTGCCACTAGCGACGGACCGTATCC
AACTTCCATTTTACGAGCAGAGTCGAGCAGCAATAAGAAAGCAAGTCCAT
TAAACACACCTGATGATTATAAAGGCTTTCCATTGAGACAAATAAAAAAG
CAACCATCCCAAAGAAGCATATTAATCAATCAACCAACTGCACTACCTTC
ACTACCCCCTGAAACTCAATCAAGTTTCAATGCGTTTCATGGCAATATAA
TGAGTTCATCCAGGGGGCAACTGTTTAAAGATCAACATCGACGACCATCC
ATGGTGACTTTTCAAATggatggaaaatcaaaacaaaaccgtTTCAATAC
GATTGCTCATGTAAGAAtgccttttgaagttttttcctCATATCTTCAGG
CTGGCTTTAAAAATGTTGTTATTGCTAACATCTTGAACGATTCTTTTACC
AAAAAGTATATGAAAGTCAGAAAGTCCAACTGTTACCTCATAAAATAAAT
CAAGGCAAGCCTTAACTGAATTAAATTTACTCtacttcattttttttact
ttgaaggCAAGCCTCCCAATTCTGGATAGTataattatttttcacataGA
ATTATTGCATAGAAAATTATAGGCCTTTATACCTTTTCAACGATATATGA
TATATGTTAGGATTGAAGCATTCGTTtgaaaaatgataacaaaacAAAGA
CTAGTGCAGACTTAAAGCCAACGGACTTTAATTTGTTTTAGAAACCTCGC
CAAAGAGTCGGTCTAGATTTGAACTTTCACAGCCAAGGTACCAACAAGGC
AAACAACAATCATCAAAGATTCAACTATTTCACCGATCTAGAACAATTTC
CACCACACTCTGCTTTAACCAAGAAATATTCGAGTAGTCAAGACCTTACC
AATTCATCCATTACTGGACTAGATCTCACATCTGATATGAATCGGATTAA
AAAGTTACGATTTTCAAATTGTGCCAGCAGTGTACCTGATTTTCATAAGC
AAGGTTTGGTGGTTGATGGCGCCCGACATCAAACTGCACTTCAAGATGCA
TATCATAATAACAGGGAATCAGATGCGGATTCGAGAAGTCATCGAACAGT
AAGGCtatagaaacatttttttgttatcTTGGTTGGGCGCTTCTAAATCT
AACCTAaatctttgttaaaatttttcctATTTAAACAGATGATTTGTGGA
GTTTCTTTCCATCTGCAAAAATCTTATGTCAAACATTTTTCCTTTTGCAA
AAATCTTATGCCAAATTTTTCTCCTTTTCGCTAGAatctttcttcaaaag
tttctcCCTTTCTGCATCATCTTCAAATATCTTGTCAAGAagtctttttt
gtaaaatcttatgtcaaatattttttcctttttgcaaaatctctcatcaa
atatttttttccttttttgaaaaatctttcgtcaacaaatatcttttcct
ttttcgcaaaatccacatcagatatttttcctttttgttaaatcttcttc
ttttcAGAACACTCGAAAAATGCCCAGAATCACTGATTTTAGTATCAATg
tactaaaaaaaatttcaaattttagtctggatagtggttttattttttta
ggtataccaccacgtcactaaacatcatgatgtctgagattttagtccCT
GCATAGGAGTCCTCTGCAAAGTATATTCATTgaatttaaagcccgaaggg
ctagagtagaatctctaacctttcccaggcaaaaaaaagtgaagccactt
atttcccatccagaacgcggcGCAAtattgacgacggattgtatcttgcg
gttcctatatttttgaggatttaattgcactttttgaaatctagtgatat
gttttactttcaatccggtaAAACAATGCGCAgacgttctggatgggaaa
taagtggcttcgtttcccatccaggagtctcgagtctagcccttcgggcc
tGGAAGTCAATGAGTATATTAAACACTTTTGTTTTTCTCATAACTAGAAA
GAAGAAGTAACAGACGAAGGCCAGATGCAATGTGTTTTCGAATTCGACAT
TGAAAGGTGGGTTTCCACATAGTCTGATTTGCAGGCCTCTAGAAGAATGT
ATTAATTACTAGGTATTAGAAAATTTTTCGTTAGGGGATGAGCAAAAGGC
TAGTTTTATGTCGCTTGTTCTATAAAAGATCAAAGTGAAACTAAGTTGAC
ATCGATCAAATAACCAAGTAAGGCCATTTTAGAGGTATGATCGCAGAGct
cagttttatttttaagaaatctGACTTCATTACTCTAACAGGCTCAAACT
CAAAATCAAGGATTTGCAAGTCCAAACAATGTTTCCACCTGGAGTGCCTG
GATTCGTTGTCGAAGTCATGTTGGAGCCCCGCGCACGCACCGAAGAGATC
GCGCGGTCTAAAGTGTACGTCACAGTGGACCAACAAGTGGAAATACAACT
TGAAgagatatttcaaatttcatgcAGCAAAGAACAGTTGATGCAATGTT
CTATTATCATCTCTGTAATTCCTATCTTGGGGAATATGGTTTTCGTGGTT
GAAACTGGTCTTAATGAACTTAATTTGATTGGCAATGGTGAAATATTTTT
GGGTGGATTCTTCAAAGGAATTTATTCGCAAACCTTTTAAGGTATTGAAA
TGCTCAAAGCAGTGTTGCAACCAGTTTTTGTGAATCTGGATGTAAATACG
ATTAACCTTTTGTTTGGTGGATCATTTGACTGAAATCCCTTGTACTGACA
ATCATAACGTATCTCAATTGCACACTTTGGACCATGTTTACTTCAAGTAA
ATTTTGACAACAGATAATACAATTAATTTAATAGCATACCTTTAAAGTTA
AGAGATCCGCGGAGTTCTGCATTATCAATCATATTGAACGGTTATTGCTG
AAGCTTCCAAGAACAAGGCTCTAAGCCACTGAACCATTCCATTTCACTTT
CTCATGGTGGTTGACCACTCTTAAAAACTGCGTGCCGGCTGTTACCACAT
CTgctttattatttttcatttctctatAAGAATACATTAATATGATAGAC
TTtctctactttaatgggataaacttattcaaaaatttcgcagATGAGGG
TTCACTGATC Coding sequence (CDS) from alignment at sc0000104_pilon:610107..614466+ >MSTRG.13271.1.p1 ID=MSTRG.13271.1.p1|Name=MSTRG.13271.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=6795bp|location=Sequence derived from alignment at sc0000104_pilon:610107..614466+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaagattgaagaaaatatttgttatGGTGGCTTTAATTATGACTTGTA
CAAGTACGGTACAATCATTTTATTCGTCTCGTGCGTTATGGCATTGGTTG
CAATCCATTTTATTTGCCCGTTGAGATGGAATCGcaacaaaattatcaaa
acactCTCCAACATGAAGCAACGAACTCAAAGATCTGCCAAGAAAAAACG
ACGAAACTTCTTTGACACAAGAAGCATCAGTGCAAACACTGAATTTGATT
TCCAACCCGTTGCCACTAGCGACGGACCGTATCCAACTTCCATTTTACGA
GCAGAGTCGAGCAGCAATAAGAAAGCAAGTCCATTAAACACACCTGATGA
TTATAAAGGCTTTCCATTGAGACAAATAAAAAAGCAACCATCCCAAAGAA
GCATATTAATCAATCAACCAACTGCACTACCTTCACTACCCCCTGAAACT
CAATCAAGTTTCAATGCGTTTCATGGCAATATAATGAGTTCATCCAGGGG
GCAACTGTTTAAAGATCAACATCGACGACCATCCATGGTGACTTTTCAAA
TggatggaaaatcaaaacaaaaccgtTTCAATACGATTGCTCATAAACCT
CGCCAAAGAGTCGGTCTAGATTTGAACTTTCACAGCCAAGGTACCAACAA
GGCAAACAACAATCATCAAAGATTCAACTATTTCACCGATCTAGAACAAT
TTCCACCACACTCTGCTTTAACCAAGAAATATTCGAGTAGTCAAGACCTT
ACCAATTCATCCATTACTGGACTAGATCTCACATCTGATATGAATCGGAT
TAAAAAGTTACGATTTTCAAATTGTGCCAGCAGTGTACCTGATTTTCATA
AGCAAGGTTTGGTGGTTGATGGCGCCCGACATCAAACTGCACTTCAAGAT
GCATATCATAATAACAGGGAATCAGATGCGGATTCGAGAAGTCATCGAAC
AAAAGAAGAAGTAACAGACGAAGGCCAGATGCAATGTGTTTTCGAATTCG
ACATTGAAAGGCTCAAACTCAAAATCAAGGATTTGCAAGTCCAAACAATG
TTTCCACCTGGAGTGCCTGGATTCGTTGTCGAAGTCATGTTGGAGCCCCG
CGCACGCACCGAAGAGATCGCGCGGTCTAAAGTGTACGTCACAGTGGACC
AACAAGTGGAAATACAACTTGAAgagatatttcaaatttcatgcAGCAAA
GAACAGTTGATGCAATGTTCTATTATCATCTCTGTAATTCCTATCTTGGG
GAATATGGTTTTCGTGGTTGAAACTGGTCTTAATGAACTTAATTTGATTG
GCAATGGTGAAATATTTTTGGGTGGATTCTTCAAAGGAATTTATTCGCAA
ACCTTTTAAatgaagattgaagaaaatatttgttatGGTGGCTTTAATTA
TGACTTGTACAAGTACGGTACAATCATTTTATTCGTCTCGTGCGTTATGG
CATTGGTTGCAATCCATTTTATTTGCCCGTTGAGATGGAATCGcaacaaa
attatcaaaacactCTCCAACATGAAGCAACGAACTCAAAGATCTGCCAA
GAAAAAACGACGAAACTTCTTTGACACAAGAAGCATCAGTGCAAACACTG
AATTTGATTTCCAACCCGTTGCCACTAGCGACGGACCGTATCCAACTTCC
ATTTTACGAGCAGAGTCGAGCAGCAATAAGAAAGCAAGTCCATTAAACAC
ACCTGATGATTATAAAGGCTTTCCATTGAGACAAATAAAAAAGCAACCAT
CCCAAAGAAGCATATTAATCAATCAACCAACTGCACTACCTTCACTACCC
CCTGAAACTCAATCAAGTTTCAATGCGTTTCATGGCAATATAATGAGTTC
ATCCAGGGGGCAACTGTTTAAAGATCAACATCGACGACCATCCATGGTGA
CTTTTCAAATggatggaaaatcaaaacaaaaccgtTTCAATACGATTGCT
CATAAACCTCGCCAAAGAGTCGGTCTAGATTTGAACTTTCACAGCCAAGG
TACCAACAAGGCAAACAACAATCATCAAAGATTCAACTATTTCACCGATC
TAGAACAATTTCCACCACACTCTGCTTTAACCAAGAAATATTCGAGTAGT
CAAGACCTTACCAATTCATCCATTACTGGACTAGATCTCACATCTGATAT
GAATCGGATTAAAAAGTTACGATTTTCAAATTGTGCCAGCAGTGTACCTG
ATTTTCATAAGCAAGGTTTGGTGGTTGATGGCGCCCGACATCAAACTGCA
CTTCAAGATGCATATCATAATAACAGGGAATCAGATGCGGATTCGAGAAG
TCATCGAACAAAAGAAGAAGTAACAGACGAAGGCCAGATGCAATGTGTTT
TCGAATTCGACATTGAAAGGCTCAAACTCAAAATCAAGGATTTGCAAGTC
CAAACAATGTTTCCACCTGGAGTGCCTGGATTCGTTGTCGAAGTCATGTT
GGAGCCCCGCGCACGCACCGAAGAGATCGCGCGGTCTAAAGTGTACGTCA
CAGTGGACCAACAAGTGGAAATACAACTTGAAgagatatttcaaatttca
tgcAGCAAAGAACAGTTGATGCAATGTTCTATTATCATCTCTGTAATTCC
TATCTTGGGGAATATGGTTTTCGTGGTTGAAACTGGTCTTAATGAACTTA
ATTTGATTGGCAATGGTGAAATATTTTTGGGTGGATTCTTCAAAGGAATT
TATTCGCAAACCTTTTAAatgaagattgaagaaaatatttgttatGGTGG
CTTTAATTATGACTTGTACAAGTACGGTACAATCATTTTATTCGTCTCGT
GCGTTATGGCATTGGTTGCAATCCATTTTATTTGCCCGTTGAGATGGAAT
CGcaacaaaattatcaaaacactCTCCAACATGAAGCAACGAACTCAAAG
ATCTGCCAAGAAAAAACGACGAAACTTCTTTGACACAAGAAGCATCAGTG
CAAACACTGAATTTGATTTCCAACCCGTTGCCACTAGCGACGGACCGTAT
CCAACTTCCATTTTACGAGCAGAGTCGAGCAGCAATAAGAAAGCAAGTCC
ATTAAACACACCTGATGATTATAAAGGCTTTCCATTGAGACAAATAAAAA
AGCAACCATCCCAAAGAAGCATATTAATCAATCAACCAACTGCACTACCT
TCACTACCCCCTGAAACTCAATCAAGTTTCAATGCGTTTCATGGCAATAT
AATGAGTTCATCCAGGGGGCAACTGTTTAAAGATCAACATCGACGACCAT
CCATGGTGACTTTTCAAATggatggaaaatcaaaacaaaaccgtTTCAAT
ACGATTGCTCATAAACCTCGCCAAAGAGTCGGTCTAGATTTGAACTTTCA
CAGCCAAGGTACCAACAAGGCAAACAACAATCATCAAAGATTCAACTATT
TCACCGATCTAGAACAATTTCCACCACACTCTGCTTTAACCAAGAAATAT
TCGAGTAGTCAAGACCTTACCAATTCATCCATTACTGGACTAGATCTCAC
ATCTGATATGAATCGGATTAAAAAGTTACGATTTTCAAATTGTGCCAGCA
GTGTACCTGATTTTCATAAGCAAGGTTTGGTGGTTGATGGCGCCCGACAT
CAAACTGCACTTCAAGATGCATATCATAATAACAGGGAATCAGATGCGGA
TTCGAGAAGTCATCGAACAAAAGAAGAAGTAACAGACGAAGGCCAGATGC
AATGTGTTTTCGAATTCGACATTGAAAGGCTCAAACTCAAAATCAAGGAT
TTGCAAGTCCAAACAATGTTTCCACCTGGAGTGCCTGGATTCGTTGTCGA
AGTCATGTTGGAGCCCCGCGCACGCACCGAAGAGATCGCGCGGTCTAAAG
TGTACGTCACAGTGGACCAACAAGTGGAAATACAACTTGAAgagatattt
caaatttcatgcAGCAAAGAACAGTTGATGCAATGTTCTATTATCATCTC
TGTAATTCCTATCTTGGGGAATATGGTTTTCGTGGTTGAAACTGGTCTTA
ATGAACTTAATTTGATTGGCAATGGTGAAATATTTTTGGGTGGATTCTTC
AAAGGAATTTATTCGCAAACCTTTTAAatgaagattgaagaaaatatttg
ttatGGTGGCTTTAATTATGACTTGTACAAGTACGGTACAATCATTTTAT
TCGTCTCGTGCGTTATGGCATTGGTTGCAATCCATTTTATTTGCCCGTTG
AGATGGAATCGcaacaaaattatcaaaacactCTCCAACATGAAGCAACG
AACTCAAAGATCTGCCAAGAAAAAACGACGAAACTTCTTTGACACAAGAA
GCATCAGTGCAAACACTGAATTTGATTTCCAACCCGTTGCCACTAGCGAC
GGACCGTATCCAACTTCCATTTTACGAGCAGAGTCGAGCAGCAATAAGAA
AGCAAGTCCATTAAACACACCTGATGATTATAAAGGCTTTCCATTGAGAC
AAATAAAAAAGCAACCATCCCAAAGAAGCATATTAATCAATCAACCAACT
GCACTACCTTCACTACCCCCTGAAACTCAATCAAGTTTCAATGCGTTTCA
TGGCAATATAATGAGTTCATCCAGGGGGCAACTGTTTAAAGATCAACATC
GACGACCATCCATGGTGACTTTTCAAATggatggaaaatcaaaacaaaac
cgtTTCAATACGATTGCTCATAAACCTCGCCAAAGAGTCGGTCTAGATTT
GAACTTTCACAGCCAAGGTACCAACAAGGCAAACAACAATCATCAAAGAT
TCAACTATTTCACCGATCTAGAACAATTTCCACCACACTCTGCTTTAACC
AAGAAATATTCGAGTAGTCAAGACCTTACCAATTCATCCATTACTGGACT
AGATCTCACATCTGATATGAATCGGATTAAAAAGTTACGATTTTCAAATT
GTGCCAGCAGTGTACCTGATTTTCATAAGCAAGGTTTGGTGGTTGATGGC
GCCCGACATCAAACTGCACTTCAAGATGCATATCATAATAACAGGGAATC
AGATGCGGATTCGAGAAGTCATCGAACAAAAGAAGAAGTAACAGACGAAG
GCCAGATGCAATGTGTTTTCGAATTCGACATTGAAAGGCTCAAACTCAAA
ATCAAGGATTTGCAAGTCCAAACAATGTTTCCACCTGGAGTGCCTGGATT
CGTTGTCGAAGTCATGTTGGAGCCCCGCGCACGCACCGAAGAGATCGCGC
GGTCTAAAGTGTACGTCACAGTGGACCAACAAGTGGAAATACAACTTGAA
gagatatttcaaatttcatgcAGCAAAGAACAGTTGATGCAATGTTCTAT
TATCATCTCTGTAATTCCTATCTTGGGGAATATGGTTTTCGTGGTTGAAA
CTGGTCTTAATGAACTTAATTTGATTGGCAATGGTGAAATATTTTTGGGT
GGATTCTTCAAAGGAATTTATTCGCAAACCTTTTAAatgaagattgaaga
aaatatttgttatGGTGGCTTTAATTATGACTTGTACAAGTACGGTACAA
TCATTTTATTCGTCTCGTGCGTTATGGCATTGGTTGCAATCCATTTTATT
TGCCCGTTGAGATGGAATCGcaacaaaattatcaaaacactCTCCAACAT
GAAGCAACGAACTCAAAGATCTGCCAAGAAAAAACGACGAAACTTCTTTG
ACACAAGAAGCATCAGTGCAAACACTGAATTTGATTTCCAACCCGTTGCC
ACTAGCGACGGACCGTATCCAACTTCCATTTTACGAGCAGAGTCGAGCAG
CAATAAGAAAGCAAGTCCATTAAACACACCTGATGATTATAAAGGCTTTC
CATTGAGACAAATAAAAAAGCAACCATCCCAAAGAAGCATATTAATCAAT
CAACCAACTGCACTACCTTCACTACCCCCTGAAACTCAATCAAGTTTCAA
TGCGTTTCATGGCAATATAATGAGTTCATCCAGGGGGCAACTGTTTAAAG
ATCAACATCGACGACCATCCATGGTGACTTTTCAAATggatggaaaatca
aaacaaaaccgtTTCAATACGATTGCTCATAAACCTCGCCAAAGAGTCGG
TCTAGATTTGAACTTTCACAGCCAAGGTACCAACAAGGCAAACAACAATC
ATCAAAGATTCAACTATTTCACCGATCTAGAACAATTTCCACCACACTCT
GCTTTAACCAAGAAATATTCGAGTAGTCAAGACCTTACCAATTCATCCAT
TACTGGACTAGATCTCACATCTGATATGAATCGGATTAAAAAGTTACGAT
TTTCAAATTGTGCCAGCAGTGTACCTGATTTTCATAAGCAAGGTTTGGTG
GTTGATGGCGCCCGACATCAAACTGCACTTCAAGATGCATATCATAATAA
CAGGGAATCAGATGCGGATTCGAGAAGTCATCGAACAAAAGAAGAAGTAA
CAGACGAAGGCCAGATGCAATGTGTTTTCGAATTCGACATTGAAAGGCTC
AAACTCAAAATCAAGGATTTGCAAGTCCAAACAATGTTTCCACCTGGAGT
GCCTGGATTCGTTGTCGAAGTCATGTTGGAGCCCCGCGCACGCACCGAAG
AGATCGCGCGGTCTAAAGTGTACGTCACAGTGGACCAACAAGTGGAAATA
CAACTTGAAgagatatttcaaatttcatgcAGCAAAGAACAGTTGATGCA
ATGTTCTATTATCATCTCTGTAATTCCTATCTTGGGGAATATGGTTTTCG
TGGTTGAAACTGGTCTTAATGAACTTAATTTGATTGGCAATGGTGAAATA
TTTTTGGGTGGATTCTTCAAAGGAATTTATTCGCAAACCTTTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000104_pilon | genome | sc0000104_pilon:610107..614466 + |
|
