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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000104_pilon:604947..609113+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13270.1.p1 ID=MSTRG.13270.1.p1|Name=MSTRG.13270.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4167bp|location=Sequence derived from alignment at sc0000104_pilon:604947..609113+ (Clytia hemisphaerica_ch_hm2_pilon)
aattttattttcaggaaaaaaatcaaaagctaaTACAATTAAAATGGCAA
CTGAAAAGAAATATAAATTATCTTATTTCGATTTGAGAGGTCGCGGTGAA
GTCCCTCGAATGATTTTTAATTATGTTGGTGTGGAATTTGAAGATAAACG
AATTCCATTTCCAGAATGGCCAGCCGTTAAATCTACATGTAAGCTAAAAT
TTGAATCtctcttaaaattcaaaatacttATAAATCATCAGTGTCAGTCG
AGGATATTTTAGAAATTAAAGTTAAAGTCATTTTCTGTTGAAGATCTGAT
GACAGACACAGGGTCCCACAAGTGGTCATTTCCCATGCATAGGATTTCAA
TGGGAATTTCATGGGATTTTTCTTGTGtcaaatgtacaaaatgtgaaaga
TCTTAAATTTTCATCCATTTTAGTTCCGTTGGGATTTATACCAGTCATAA
CTACTCCAGATGGTACTGACATCTCTCAAACACTAGCCTGTATCATGTAC
ATGGGTGATGAATTTAGCCTGTATGGTAACAATGCAAGTCAAAGAGGTGT
GATAAACTGTGTCGTCatttcaatgaaagaaattcaTGATCATTGCGCCA
ATATCGCCGTCTTTttaaaggaagaagaagaaaaggttagaatgggctct
tccagaaaaaaactgtatATGAGGAATGGAGTAACTTTTGGCTCCCCCGG
ACAACGAGTTTTACCCCCGGGACAAGCATCAGCCGACCCCCCgaacaacc
caaattacccccggataagccaaattttgctgatttctcgctacccccgg
acaatatatcttcCACCCGGGGTGtatgaacattttctggaagagcccaa
tattgtttttattttacctCAAAGTAAGAAAGTTAGTATTTCGAGTTTCT
TGTTTGATAAATAAAGTTACAGTTGACGCTCAGTAATATGGTTTTCAAAG
AgtattggattttcatcaaataagaaAGTGTATCGAATAgcagagcgtcg
tttatgagtgATTCTGGTTGAAGCTGACTTTGAATATAATCGAATAATAG
TGCTTATTCTATCAAtggggccccccagcggtttgcgtgaatgcgtgaat
gggcttttttggttgcgtgaatgcgtgaaaatcgaaaaaaaattgcgtga
atgcgtgaattgaaaaaacttgcgtgaacgtgaaaatccatatttctatt
gcgtgaatgcgtgaatctgccctgttttttgcgtgaacgcgtgaattttt
ccttttcacaaaGGTGCGCACCTATTCcaaattcaagggatgccaggtga
aggtgtacaaaaaaatcagcaactttcaaattctctattttataagacga
ttcatgatttagatgcgctttctagcaatctagacaccttaaatttccag
attttttcgctcggccaaacatgtattggccctcgaatcttaaataactc
taatttgcccccttgaaagtgtttgtttaagataaaaccatggttatgca
tgatgagtgatccagggccagggccagggccagagtcactgggggcagga
ggcggccatgacttcaccacgtttttgcaaataaaaagaaatttatttca
aagaaatttttagccatgatgtagactttcgataacctgattttttggca
aaattagtctgaaatggagtcgtatcAAACCCTggtcgtatttaagcaca
tcagagggttaaaataaaattttctcctgtcggcgcaaaacatggttgca
cctccttagtcactatgttttcggcccctccacgttaggaaattaattcg
cgagccctgattaaaacctttctttttaattttttttgatcgcttcgctc
gcaacaaatgttcattcttttacctcattttacaagctattaagcgatcg
taccttgcctctaacgaatttagactacattatttttcaatggtgttaaa
gagagcatttttagccaaacgcgagcgacagaaatgcaaaaatttcttct
ctgcgtaaaccatggttgcgcctccttacccctgagctaagcatcatggt
gtcatactcgagtttgtttgagataatgtttaagctattttttgtacaaa
aattcgcctgcggcgcatatcttttcacttactatcgcgatacgttaact
gcagaagcttcaccttttctaaacgatcgtgacaagttagaagaatcaaa
tattttgcgtgatggcatgtgattaaagttgaaaaattacgtaacgcttt
ctatttgggggcttcttatgacgctaccaaacacggtgttttatagtcag
gtctacaggaaaaaatcactactgagttaagtttttctcaagtgcatgac
cagatccggtcgaataatatctcgaatacagccttgtcatacttttttat
gcaaatcgaacgttttactccataatggcggaaattacgtaaattacgta
acttagcgaaatgtgcaagacctcaatttttgacatttcccccgattttt
tccgaaaatctccccgatttcccaaaaaattgggtttgcgtgaatttcga
gaaaaacttgcgtgaatgcgtgaattgcgaaaaaattttgcgtgaatgcg
tgaaatttgggtccgctgggggggcctcatcaATGGATACAGTATTAATT
TGAACACACTTTGTTTTCTAAACATTTACAATCTTCCCTTTTCTTTTCTA
CAGGAAAAAGTTCGTGCaattttggataaaaaaattccaatctTTTTCAA
GTATTTTGAAGAATTAAGATCTCAAAACAGTTCAAGTGCCTTCCTCGTCA
GCAAATCTGTAAGTTCGTGattttccgcttaattctattttttcctcttt
ggtaattttaattcgttttaaagttttaGTaaagaaatgttttcaaaaat
catatcTTTCACGTTACTTCAAAATGCTCTTATGTCCGGGAgagggggca
ctgaccttgacggccgaaggggatgtgccgctggagATGGAAAAACGGAG
CCTGTTAGATATtgatttgggaccctgtcagaacgaaaaatttcccatgt
ttttccgaaaattggcaaaaatgactaaaagtagacgcaacattaaaaca
ttttctaacTTCCACTCTActctgaaaattgtcaaaaattaccaaaagtc
gaccctgtcaaataaacatcttgaaaattactAGATTtaagaccctgtca
gatatcttcagagcctgataaagggaccctgaccagcggcacgtctccgt
acccaatacacctttttacggttagctgcttcgtataaaaactcaccaaa
attttgagtaaacaaaccatctcattggctaaaagcaaaaacatacaCGA
AAAAATGTCCTGAGTAAGAACACAGAAAGCACATTTTCTCATACTCtgca
tatttttttgtttgtgtttttgcttttagccaatgggatggtttactcga
aattttggtgactttttatacgaaacggCTAACCGGAAAACGGTGTATTT
TGCCCAAGTGACACCCGGGTTCTTATAATGAGAAGAAGTGGTTATAATAA
AAATGACATTAACTTTCTCTTTAACTACAGATCACCATTGCAGATTTCTT
TTTGGTCGACACATTGGAATTTATTTCTGCAGCGATGCCCGGCCGTGATT
TCCTGGCTGACTATCCGAAATTAAAAGCATTAAATGACCATATTCGAGGT
TTAGACAAAGTCAAAGAATACTTAGCCACACGCAAATAAGGTTGTCCAGT
ACCTTTGGACTGTATTTTAGCACCATCTAATTACATACTCAATACACCTT
TACACATTTTTATatgttatttataagagattagATTAGATTTTTGTGGG
TGTCATGATTCCTTATGTCCACGATTGTTCATATATGGTTCGCCAGTGTT
ATTTATGCCAAAGTAGAGGGCGTAAATAACACTGAGGGGCAATACAATAA
TGGACAATTAAGGGCATAAACAACCATACAGTCCAAAAAAGAGCGCTATT
ACTATTATCAAATCTCGTGGTacactattttttttaattagatttgaATT
AATCATAATTTATTTTCTATAAATTAGGTAGTATAGATGATTTATTGAAG
AAATTAATAtaatgatcaaaatatttttcaaatcgtTTTTTATATCTTGA
TCTCGGAGAggttcaag Coding sequence (CDS) from alignment at sc0000104_pilon:604947..609113+ >MSTRG.13270.1.p1 ID=MSTRG.13270.1.p1|Name=MSTRG.13270.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2484bp|location=Sequence derived from alignment at sc0000104_pilon:604947..609113+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAACTGAAAAGAAATATAAATTATCTTATTTCGATTTGAGAGGTCG
CGGTGAAGTCCCTCGAATGATTTTTAATTATGTTGGTGTGGAATTTGAAG
ATAAACGAATTCCATTTCCAGAATGGCCAGCCGTTAAATCTACATTTCCG
TTGGGATTTATACCAGTCATAACTACTCCAGATGGTACTGACATCTCTCA
AACACTAGCCTGTATCATGTACATGGGTGATGAATTTAGCCTGTATGGTA
ACAATGCAAGTCAAAGAGGTGTGATAAACTGTGTCGTCatttcaatgaaa
gaaattcaTGATCATTGCGCCAATATCGCCGTCTTTttaaaggaagaaga
agaaaagGAAAAAGTTCGTGCaattttggataaaaaaattccaatctTTT
TCAAGTATTTTGAAGAATTAAGATCTCAAAACAGTTCAAGTGCCTTCCTC
GTCAGCAAATCTATCACCATTGCAGATTTCTTTTTGGTCGACACATTGGA
ATTTATTTCTGCAGCGATGCCCGGCCGTGATTTCCTGGCTGACTATCCGA
AATTAAAAGCATTAAATGACCATATTCGAGGTTTAGACAAAGTCAAAGAA
TACTTAGCCACACGCAAATAAATGGCAACTGAAAAGAAATATAAATTATC
TTATTTCGATTTGAGAGGTCGCGGTGAAGTCCCTCGAATGATTTTTAATT
ATGTTGGTGTGGAATTTGAAGATAAACGAATTCCATTTCCAGAATGGCCA
GCCGTTAAATCTACATTTCCGTTGGGATTTATACCAGTCATAACTACTCC
AGATGGTACTGACATCTCTCAAACACTAGCCTGTATCATGTACATGGGTG
ATGAATTTAGCCTGTATGGTAACAATGCAAGTCAAAGAGGTGTGATAAAC
TGTGTCGTCatttcaatgaaagaaattcaTGATCATTGCGCCAATATCGC
CGTCTTTttaaaggaagaagaagaaaagGAAAAAGTTCGTGCaattttgg
ataaaaaaattccaatctTTTTCAAGTATTTTGAAGAATTAAGATCTCAA
AACAGTTCAAGTGCCTTCCTCGTCAGCAAATCTATCACCATTGCAGATTT
CTTTTTGGTCGACACATTGGAATTTATTTCTGCAGCGATGCCCGGCCGTG
ATTTCCTGGCTGACTATCCGAAATTAAAAGCATTAAATGACCATATTCGA
GGTTTAGACAAAGTCAAAGAATACTTAGCCACACGCAAATAAATGGCAAC
TGAAAAGAAATATAAATTATCTTATTTCGATTTGAGAGGTCGCGGTGAAG
TCCCTCGAATGATTTTTAATTATGTTGGTGTGGAATTTGAAGATAAACGA
ATTCCATTTCCAGAATGGCCAGCCGTTAAATCTACATTTCCGTTGGGATT
TATACCAGTCATAACTACTCCAGATGGTACTGACATCTCTCAAACACTAG
CCTGTATCATGTACATGGGTGATGAATTTAGCCTGTATGGTAACAATGCA
AGTCAAAGAGGTGTGATAAACTGTGTCGTCatttcaatgaaagaaattca
TGATCATTGCGCCAATATCGCCGTCTTTttaaaggaagaagaagaaaagG
AAAAAGTTCGTGCaattttggataaaaaaattccaatctTTTTCAAGTAT
TTTGAAGAATTAAGATCTCAAAACAGTTCAAGTGCCTTCCTCGTCAGCAA
ATCTATCACCATTGCAGATTTCTTTTTGGTCGACACATTGGAATTTATTT
CTGCAGCGATGCCCGGCCGTGATTTCCTGGCTGACTATCCGAAATTAAAA
GCATTAAATGACCATATTCGAGGTTTAGACAAAGTCAAAGAATACTTAGC
CACACGCAAATAAATGGCAACTGAAAAGAAATATAAATTATCTTATTTCG
ATTTGAGAGGTCGCGGTGAAGTCCCTCGAATGATTTTTAATTATGTTGGT
GTGGAATTTGAAGATAAACGAATTCCATTTCCAGAATGGCCAGCCGTTAA
ATCTACATTTCCGTTGGGATTTATACCAGTCATAACTACTCCAGATGGTA
CTGACATCTCTCAAACACTAGCCTGTATCATGTACATGGGTGATGAATTT
AGCCTGTATGGTAACAATGCAAGTCAAAGAGGTGTGATAAACTGTGTCGT
CatttcaatgaaagaaattcaTGATCATTGCGCCAATATCGCCGTCTTTt
taaaggaagaagaagaaaagGAAAAAGTTCGTGCaattttggataaaaaa
attccaatctTTTTCAAGTATTTTGAAGAATTAAGATCTCAAAACAGTTC
AAGTGCCTTCCTCGTCAGCAAATCTATCACCATTGCAGATTTCTTTTTGG
TCGACACATTGGAATTTATTTCTGCAGCGATGCCCGGCCGTGATTTCCTG
GCTGACTATCCGAAATTAAAAGCATTAAATGACCATATTCGAGGTTTAGA
CAAAGTCAAAGAATACTTAGCCACACGCAAATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000104_pilon | genome | sc0000104_pilon:604947..609113 + |
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