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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000104_pilon:582423..585053- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13267.1.p1 ID=MSTRG.13267.1.p1|Name=MSTRG.13267.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2631bp|location=Sequence derived from alignment at sc0000104_pilon:582423..585053- (Clytia hemisphaerica_ch_hm2_pilon)
TATAGAAAAAATAACTTTTAAAAAACATGAACAAAGCATTACAATTGATT
TTTACTGCTGCATTGGATTCGATCAGACCGGAAAATTTGGTAAAGAACGC
GCTTCAACGAAATGGCAATCTGATGACCATCAAGGATAGAAGTTACTTGC
TGAATAAGAACGTTCATGTCATTGGATTTGGGAAAGCTGTCTATGGTAGG
TTTACCTTTGGTTCTACTTTTTTCATGGTGTTCTAAATTTGAACGCCTTG
CAAACACTCGCCTCCGTCAATTTTATCGAGGTTGATTCATTATTACGTTC
GAATGTTTTCGAAGTCGCTGCGTTGCTGATTCGAAAAAAAACTCTGCAGC
GTCAAATGTTAGAACGCCATGCTTTTCTAGAAAAACTTTTACTCCCACAC
ATCCAATGGGTAAATGATTTTTATTTTCCATTCAAGTGAATGCCCATGGG
TTGGATATCTTTTCCAAAGAGGATATACCCTTAAGAGTTGACGATCTTTT
AAGCGAGTCTCTGCTGTATTTTGGGTTATTTTCAAAATCAATATCCTAAA
ATAGTGGAAATAAAATTTTTCAGCAAAGTCGTCAATTTAATTTAGACATT
ATTTTGGAATATTTCCTTTAAAAGAATTCAAAATGGACAGTTGGGCAATT
TATTATATATTGCTATGACGAAAAAATAATTGTACTTACAAAGGAACACG
TTGACTCTTCTTGACGTCTTGCTGTTTTTCATCCAGTCTCTCTTTAACTT
TTTAAGGTATGGCCCTGGGTGTGTCAGACATTCTAAATGATCACGTGAAC
AAAACTGTATTAAGTGTTCCAATCGGTACAATAAAGAGACGCGAGAATGT
AAAATTTCACTCAAAGTACACTATAATGGAGGGTGCTAAAGACAACCTAC
CAGATCAAGATGCCCAAAACGCCGCGATGGAGATACGTAATTTGGTGACT
CGGTTATCGCCAGATGATATTTTACTAGTCCTCATATCTGGGGGCGGATC
CGCACTGCTACCAGCAGCTTTGGAAGGAATGACGCTTTCCCAAAAATTGG
AAATCATCAAACTCGTGGCTAGCGCTGGTGGAAATATCAATCAATTGAAT
ACTATAAGAAAACATCTATCACAACTTAAAGGAGGTAAATTAGCTATTTT
ATCTCCATCATGTAATATTATCTCCTTAATAATATCAGACATCGTTGGTG
ACCCATTAGATTTGATTGCATCTGCACCAACTGTCTTTGATCCATCGACT
GGTGAAGATTGTTTGAAGATACTGAAAGATCTTAACATTGATCACAAGAT
CCCTGATAAAATTAAATGTATATTTTCAAGACTCGAATCTAACCTTAATA
ACAAGGAGATTATCGAAACAAAATGTCTAAACACCATTATTGGAAACAAC
GATATAGCCCTGCAAGCTGCTGCATCGGCTGCTCAAGAGTATGGTTTTGA
AACATTGATTTTATCCTCGACCATCCAGGGAGATGCTAGTCAAGTAGGAA
AGTACATGGCAGAGCTTGCTTTAAATGTCCTACAAAATCAACAAGAAAAT
ATAAGTAATACTTTGAAACAACTTGATATTGAGGATCATGTAATTATTAA
CCTAAAACATATACTTCAAAACCATCGGGGAAATTTATGTTTGATTTTTG
GTGGTGAAACTACAGTTCGGGTGAATGGTCAAGGGCGTGGTGGGCGGAAT
CAGCATCTCGTTTTATCCGCCCTTAAAAACCTTTTACAAAGTTCTAGTTC
ACTGGACTTATCTAAGGTGACCTTTCTCAGTGCTGGAACCGACGGCCAGG
ATGGACCCACAGATGCTGCTGGGGCATGGATTGATGTGAATCTAGTGAAC
CATTGTGTAGATAAATTGGATACAGTGAATCGTTATTTAGATGATTGTGG
CTCCTACGATTTCTTTAACTCTAATAAGTTTTTGAAACAATATTTATTGC
AACCTGGTCTTACAGGAACTAATGTGATGGATATACAAGTCATTCTTATA
CACCAAACGTAAATTTTGCCCACGAACTGAATTTGCTTGATTCAGATCGA
TATCCAATTTAATGTAGATCTATATTTTACTCCATCTGGATGGTTATGAT
TTTTAAAGTTAATTTTTTTAGATTTTGATATTTTCCTGCGAAATTCAAGC
CTTTATCCCAATTTTTTTTCACAACTCATTCTTATACGCCAACCGTGTAA
ATATTGCCCACAAATTGACTTTGTTTGCTTTGGAGCGTCTATTCAGATCT
ATATCCACTGCAATTTTTAAACTGGGTTACATGTTGGATTTTTAAAACAA
TATTTTTTTGCGAAATCAAAACTTCTTTCACCAGTTTCTGTGAATCGATG
TTATCTCGTGTATCCTAAAACCGAAATAGTCATCTTATTTCAATTCAAAT
TATTCATGGTTACGAATTCAGTAGGCTCTTGCCTTTGTTATATAGCAACA
CAGATAGTTAAATGAAGGGTCCGTCCAACCTGTCCTTCGCCTGGTATAAA
ATTAGTACCTAACTTTTTTGGTAGACTGTAGGATAGGGAGAATTTTACAC
AAAAAATTGTAATAGATTCTATTGTGTGATTTTTTGTTCATTCCATCTTT
CCATCGCTTTGATCGGTCTTTTTTTGCCTGT Coding sequence (CDS) from alignment at sc0000104_pilon:582423..585053- >MSTRG.13267.1.p1 ID=MSTRG.13267.1.p1|Name=MSTRG.13267.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2850bp|location=Sequence derived from alignment at sc0000104_pilon:582423..585053- (Clytia hemisphaerica_ch_hm2_pilon)
GTATGGCCCTGGGTGTGTCAGACATTCTAAATGATCACGTGAACAAAACT
GTATTAAGTGTTCCAATCGGTACAATAAAGAGACGCGAGAATGTAAAATT
TCACTCAAAGTACACTATAATGGAGGGTGCTAAAGACAACCTACCAGATC
AAGATGCCCAAAACGCCGCGATGGAGATACGTAATTTGGTGACTCGGTTA
TCGCCAGATGATATTTTACTAGTCCTCATATCTGGGGGCGGATCCGCACT
GCTACCAGCAGCTTTGGAAGGAATGACGCTTTCCCAAAAATTGGAAATCA
TCAAACTCGTGGCTAGCGCTGGTGGAAATATCAATCAATTGAATACTATA
AGAAAACATCTATCACAACTTAAAGGAGGTAAATTAGCTATTTTATCTCC
ATCATGTAATATTATCTCCTTAATAATATCAGACATCGTTGGTGACCCAT
TAGATTTGATTGCATCTGCACCAACTGTCTTTGATCCATCGACTGGTGAA
GATTGTTTGAAGATACTGAAAGATCTTAACATTGATCACAAGATCCCTGA
TAAAATTAAATGTATATTTTCAAGACTCGAATCTAACCTTAATAACAAGG
AGATTATCGAAACAAAATGTCTAAACACCATTATTGGAAACAACGATATA
GCCCTGCAAGCTGCTGCATCGGCTGCTCAAGAGTATGGTTTTGAAACATT
GATTTTATCCTCGACCATCCAGGGAGATGCTAGTCAAGTAGGAAAGTACA
TGGCAGAGCTTGCTTTAAATGTCCTACAAAATCAACAAGAAAATATAAGT
AATACTTTGAAACAACTTGATATTGAGGATCATGTAATTATTAACCTAAA
ACATATACTTCAAAACCATCGGGGAAATTTATGTTTGATTTTTGGTGGTG
AAACTACAGTTCGGGTGAATGGTCAAGGGCGTGGTGGGCGGAATCAGCAT
CTCGTTTTATCCGCCCTTAAAAACCTTTTACAAAGTTCTAGTTCACTGGA
CTTATCTAAGGTGACCTTTCTCAGTGCTGGAACCGACGGCCAGGATGGAC
CCACAGATGCTGCTGGGGCATGGATTGATGTGAATCTAGTGAACCATTGT
GTAGATAAATTGGATACAGTGAATCGTTATTTAGATGATTGTGGCTCCTA
CGATTTCTTTAACTCTAATAAGTTTTTGAAACAATATTTATTGCAACCTG
GTCTTACAGGAACTAATGTGATGGATATACAAGTCATTCTTATACACCAA
ACGTAAATGAACAAAGCATTACAATTGATTTTTACTGCTGCATTGGATTC
GATCAGACCGGAAAATTTGGTAAAGAACGCGCTTCAACGAAATGGCAATC
TGATGACCATCAAGGATAGAAGTTACTTGCTGAATAAGAACGTTCATGTC
ATTGGATTTGGGAAAGCTGTCTATGGTATGGCCCTGGGTGTGTCAGACAT
TCTAAATGATCACGTGAACAAAACTGTATTAAGTGTTCCAATCGGTACAA
TAAAGAGACGCGAGAATGTAAAATTTCACTCAAAGTACACTATAATGGAG
GGTGCTAAAGACAACCTACCAGATCAAGATGCCCAAAACGCCGCGATGGA
GATACGTAATTTGGTGACTCGGTTATCGCCAGATGATATTTTACTAGTCC
TCATATCTGGGGGCGGATCCGCACTGCTACCAGCAGCTTTGGAAGGAATG
ACGCTTTCCCAAAAATTGGAAATCATCAAACTCGTGGCTAGCGCTGGTGG
AAATATCAATCAATTGAATACTATAAGAAAACATCTATCACAACTTAAAG
GAGGTAAATTAGCTATTTTATCTCCATCATGTAATATTATCTCCTTAATA
ATATCAGACATCGTTGGTGACCCATTAGATTTGATTGCATCTGCACCAAC
TGTCTTTGATCCATCGACTGGTGAAGATTGTTTGAAGATACTGAAAGATC
TTAACATTGATCACAAGATCCCTGATAAAATTAAATGTATATTTTCAAGA
CTCGAATCTAACCTTAATAACAAGGAGATTATCGAAACAAAATGTCTAAA
CACCATTATTGGAAACAACGATATAGCCCTGCAAGCTGCTGCATCGGCTG
CTCAAGAGTATGGTTTTGAAACATTGATTTTATCCTCGACCATCCAGGGA
GATGCTAGTCAAGTAGGAAAGTACATGGCAGAGCTTGCTTTAAATGTCCT
ACAAAATCAACAAGAAAATATAAGTAATACTTTGAAACAACTTGATATTG
AGGATCATGTAATTATTAACCTAAAACATATACTTCAAAACCATCGGGGA
AATTTATGTTTGATTTTTGGTGGTGAAACTACAGTTCGGGTGAATGGTCA
AGGGCGTGGTGGGCGGAATCAGCATCTCGTTTTATCCGCCCTTAAAAACC
TTTTACAAAGTTCTAGTTCACTGGACTTATCTAAGGTGACCTTTCTCAGT
GCTGGAACCGACGGCCAGGATGGACCCACAGATGCTGCTGGGGCATGGAT
TGATGTGAATCTAGTGAACCATTGTGTAGATAAATTGGATACAGTGAATC
GTTATTTAGATGATTGTGGCTCCTACGATTTCTTTAACTCTAATAAGTTT
TTGAAACAATATTTATTGCAACCTGGTCTTACAGGAACTAATGTGATGGA
TATACAAGTCATTCTTATACACCAAACGTAAATGAACAAAGCATTACAAT
TGATTTTTACTGCTGCATTGGATTCGATCAGACCGGAAAATTTGGTAAAG
AACGCGCTTCAACGAAATGGCAATCTGATGACCATCAAGGATAGAAGTTA
CTTGCTGAATAAGAACGTTCATGTCATTGGATTTGGGAAAGCTGTCTATG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000104_pilon | genome | sc0000104_pilon:582423..585053 - |
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