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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000104_pilon:510096..516702- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13264.5.p1 ID=MSTRG.13264.5.p1|Name=MSTRG.13264.5.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6607bp|location=Sequence derived from alignment at sc0000104_pilon:510096..516702- (Clytia hemisphaerica_ch_hm2_pilon)
AAGCCTTTACCTATTATCATTATACATTACTATCTCAAAGGTGTATTTTA
AGTTTTTTTCTGTGTGACGAGATTGTCCTAACTTGCGAAAGAAATATATT
CGTCGGGTCGAGTTTGTAAAGAGTTACTTGCAGCCTGGATTTAACCTTTT
TATGTCAGAAATTGTTATTTTACAATTTTTTATCACATTGAGAATAACTA
AAGATTTACTATAAATTAATTGATTGGAATTATCGCCATGGAAGGAGAAA
TGTTTTAGTCAATTTTATTTGGAATCACTGGTTTGGAAAATATGACGTGG
CAAGTCACTATAGGTTAGCTAGGTTAACATTCGATTTCTACTGCGCTTTC
CACTACTTGTATGCCTCACAGAGGATTTGATAATGTCACGTATTAATACT
TTTAGTTCTCCTTACAGACGGTAATAAGCGGGGTGAATGGAAAAATCTCA
CAAATGAAGGGAGAAAATTTATTTGAAAAGCATGTAAGGCCAAAAGAAGG
AATTTTATGAAATTAAAAAAGAATAAGTGTCGGGGGGGGGGGGGGTTGAA
ATAAGAATGTCTCAGACGATTGATTAGTTTTCTTCATACGATTTCGCTCT
ACTCGAAAATTTACTATAACTTTACCCTCATTTTTTCCTCCAATAGATTG
TTCATACGATTGCCACAAACAATGCAGTACAATCATCCCCAACAATTGCA
GTCCCGATCGAAAACTAGTTAAACGTGTCTTCGGTGTAGATCTGACGACA
CTCATCAAAGCTCACGACCAGAAACGACCACAGATTGTGGAATCGTGTGT
TCATGAACTGGAAAAACGTGGATTAGAATTGGAAGGGATATATCGTGTAC
CGGGTTTTGCTGATGATATCACGTATCTGAGGAACCAAATCGATAAAGGT
TTGTTGTTTTCATTTTCCCCGCTTCGCCGTCATTCGGAGGGCTTGCACAC
TGATATCATATTCCAGCATATTCCTTTTCACACAAAATTAAACATGCCAA
ACGCAAACTTTAATTTTATAGGATAGGGTAACTGCTCGCGGATTTTCTTT
GTAAGTCAACTAGTCCGTCATGTTGGTTTTCAGCTTATCTTAGATTTTCG
AACGTTCGAATTTCAAAATATTCAAAACGCGCTTTTGACGACCAGAATTG
AAAACAAGATGGTGGACTTTTCAGCTCTAAAACTGGACACGCTTCCTTTT
ATATGAGAAGCCCGATCCAGTCAAGTAGTTAGAGATCAATGGTCTCGAAA
GTCACGATATGAGTGAACGAATGAGTAGATTGAGTGAACGAACGAATTTC
TTCCAATCATTAAAGGAATATCATAGTAACGTTTTCACTTATCAAAACAA
TTTCTTATATCAAAATGCATTCAAAGGACTATGATATTTTGTGTGGGTAG
GATAGTTTTTTAATCATGACGTTTTTAACCTATCTATAGATGTCTGGCTA
TTTTAATTTGGGCGTGGAAAGAACAGTGTCGTCTGTATTTGAATAAACAT
CGAGTATTTGGAATTTGTCAAAATAAATCACCTTTTCGGAATTTATTACC
CAATTTATTTTGTTAAAAACTAAATTTGCCTAACTTCTGGGTTTATATTA
GTGAAAATTGGCCCAATACCCGACTTTATCATACTAAGAATTGGTCATGA
TAGTTCAAGAGCAAAGTAAAGGTCAGCATTAAAAGAGAACATGTGAAATA
AGAAAGAAGGACAGATACTTTCAAATCCAATTAATACACATTAGAGACTT
GCGTTGATAACATGTTACCTAGAAATGAGTCATTCTCGTGGGAATATTAC
ACAGCAAATAACAGTTCTAATTGCATTATCTGAAAGAAGCTACTGCCTTC
TGGAGAAGAAATTAAGTCCTGTATACTACATTGGGCTGAAAGATTTTATT
TTTAATACCCTGCCTTAACAATTGGTCTTACCGAAAGCTTTTTCAAATTT
ATCTATCAGGCTTGGAGAACAAGAACGATGTCAAACTTTTTAAACATTAT
CAAAGTCAAAACATTTGATCTAACTGATTATTGACGATGATAATCAATTT
GAAAACACATTTCAGTCTAGTTCAAAAAAAATTCATTACCGTTCCAGTCA
GTGGCGTTGTGGCAGGGGGGGCCGGGGGGGGCCATGGCCCCCCCAGCGGA
GCTTTTTTGAAGGGGCGCCGAAGAGCAAGGGGCGCCAAAAGAGATTTTCT
AAACGCCCCAATCTTAAAAATCATCAATCAATCAAGCCTTAAATTGCGCC
CAGGACCAATTTTACTGAGATAATTTTAAAATACTTGCATTTTTTTTCGC
TCGCTTCGCTCGCAATAAAGTTAATTGGTAACTTCTTTGCAATCTAGGTA
TTTTACAAGTTTTTTTGTACAATATAGCATAATTATTAAATGAAAATCTA
ACTGCGCCCCAAGACTAATTTGCTGACAACAATATTGAAATCATGAACCA
TCAGTTTTTCCGCTCGCTTCGCTCGCATTACATATTGTTTCTTTAAGTTT
CTTTTCACTCTAGCAAGTGTCAAATTTGTCTATTTTTATTTAGTGATTTA
GGGTATCTTGACAGTCGATTTTTAAAAATTTTCTAGTCGGCCCCAACCAT
GGTGGGGCCTGTTTTTCCCTTTTTTTGTTCATCAAAGATATATCTACTCT
TCTCCATTAAATATTTCCTTCCTCATTATGCCTAGGCAAATGAATTAGTA
AAAGTTTAGAAACTGGTGGGTGAGGGCAACACTTTCGAAAATTAGGGGGG
GGGGCGCCATTTTTAAAAAATTGCTGACTTTGGCCCCTCCAGAAAAATTT
TCCCACAACGCCACTGGTTCCATCCAGTTCAATGAATTAGTTAGTTTAAA
ATTGATTTTGCGTCTACATTTAAATTCATCTTTAAACACATTGAATACTC
ACCATTTTTCCCTCCATCTTTTCTTCCGTAGAAGGGACAGTACCAGATAT
AACCGAACAGGCATTTGATGACATCAATGTGATTGCTGGTCTTGTCAAAT
CATACTTTCGAACATTACCAATACCTGTCATCACCTTCGACCTTTATGAT
CAATTCATTGCTGCTGTCAGTAAGTACATTTTTATAAGCATACGACGGCT
CAGTTTTGTAGATTTCTTAAGCATAACATACCTTATCGGCCAAAACTTAG
TCGGCCCTAAGTGACTAAATTTTGGCTTGGTGACTGAAATTAGGGCCGAC
TAAAAATTAGGGCCGACTAAAAATTTGGGCCAAGTTAAAAGTTTATAATT
AAGCTTTCCTCAACCCGCTTTTCATATCGGTATTTCATATCGGTATTACT
TTAACAAAAAATTATTAGTCGGCCCTTAGTGACTAAATTTTGACGAGGTG
ACTAAAATTAGGGCCGACTAATAATTAAGCTTACACAACATTTCCATTAC
TTAGTTTATACGTCCTTTCATTATTGGAATCTATTTTTCTCTGTGGATAG
ATCAGATCAGGTGAGAGGAATGAGGGTGTACTTTAGTACTTTTCAGTTGA
CTTATCCCCCTTCTTCATCTTTCTTCTTTCTTCTCTTTTAGAAATGGAGG
ATAAAAGTGACGTACTGAAGGCATTAAGTACGGCGCTGAAGAGTTTACCA
CCAGCACATTATGAATTACTCAAATATTTCTGTCGTCATCTTCAACGGTA
AGCCCTATAAAATGATATGCACCACTGGAAAGTCTTCTGAGAATTTTTAA
AATTTTCCACCCATGTACGTCACTTAAACAATAGAAAAAGTGACGTATTG
GGTGGAAAAAGAAACAGAAAAGTTGCATAATTTCGTGAAGTCATTGCAGT
GGTGCATATCATGAATAAAATGATATTCATCTTTTATTGCCGACCCAAAA
AAATATCAGCGTTTTGATTGGTCGAGAGCATCGAGATATTTGCGATATTT
CATATTTCTTTAGTCTGGAAATATGACCGCGTTGACTTTTGGGGGACTGG
GTAAGCGGCGGGAGAAAAATCAAAACAAAACAGCCGAAAAGAACTGACTT
TTGGAGAAACTGGCTTGGGAATCAAATGGAAAAACGCAACAAAAATATGT
TCAGATTAACTTTTACTTTGGAGTTCTTCCATAAAAGACACTAAAATCAA
ATCTGATAAACTAAGAAATTATAAAACTACTTGACAAGACCCAAAAATTT
TCAGCTTTTGGTATAAAATTCGTCCGTGTGTAACCAAACAGTTTTTTATC
AATGCATATACGAAAAACTTGAGATTCTTGAATGTTTGCCAATAAGATTT
CTCATAACATAGCAAGGGAAGTGGTGATTTTTAAAAAAGTTCTCTCCTAA
TTCTCCTTCTTGACGAGGTACGTCCTTGAATTGTAAACTCAACAATCATT
TATTAATCTTCCTTCTAAAATTCGAAACAATTATAGCTTGACGATAATCA
AGAAAGTATCCAAATTGTTGTTCTTTAAACCATTATTACAAGCATACATT
TCCATCATGGAACTCCTTTCCTCTGCTATTCTTTTCCATGCATCGAAACA
AAAACATAGAAAAAGACTGAATGTTATGGGTGCATGTCACTAGTCCGACA
CTTTCTAGTCCGACAGTAAAATAGTCCGAATCTATGAAATAAATTTACAA
TTTGGAAGTCTTTTTTTCCGACGTCACTTTTGTCCGAAAACGCAAGATTT
TAGAGTGTCGGATGTTGAATAAGGGTTTTTCTCTGAGATAATAGGGATAA
TATTAATAAAAGTTTATTTTGGCGACATTTTGGCATAAGTAGAAATAAAG
GACCAATCAGGGTTGTAAATCACTAAAGAAGGGTCGTAAAAACAGCTAAA
TCCAATCTCTTGACTCTTGAAAGCCTAATCCTAACAAGCTTTCCAAAATT
TAAGAAAAGTCGGGTTTAGGGGCCTAACCTCAAAATCGGAAAAGATGTGT
TTCCTCTTCCACGATTCATATTTCGATTTTTATATGTTTTTTTTTCGACT
CGTTGTCGGACAAAATTGTTGTCGGAATACTGACACTTTCGTCAAATCCA
ACGTCGGACATTTTTACTGTCGGACTAGAAAGTGTCGGACTACTGACGAC
CTCCCAATGTTATCAATCTGATTAATCCAACGATGAAGGGTTCCTTCTCT
ATCGAAACAATACTGTACAGTCCATCTGCATTTTGAATTATCAATCTAGA
AACTTTCAAATACATCTCTGAAAAATCTGCAACTCTTCAAAACAAAACTT
CTGGATCGAAAATGCTCCTCTGTTTTGTTTTTGTGTGAATATTGTCGGCG
GGAACATATCGAATTTTTTATTGTTCGAATCTAACGTTCGAATTAGATTT
TCGAATAAAAACATTCGAAACTACACAGAAGAGAGAAGCAAGGCGGAAGT
AAGTTTTATAAAACAAAAACAAAAAGAAATTTATATCAGGACAATTTTTT
TGAGTCGACAATAAATTAGTTATCACATGACTTCTCGTGCAATACTCGAT
ATTTTACTCGTTCCGAGATTTTACCGATATTTTTCCTCGCCTAAAGGCTC
GGAAAAATATTACGGAAAAATCTCGGAACTCGTAAAATATTTCTCGTATT
GCACTCGAAGTCATGCGATAACTAGTACATATTCTTTATACGTTATAGAT
ATTCACAAGGTGGGCGGTGTCTTTTTTCGGACCTCGGTGACATATCTCTT
GTTGATTTGGTTATACACCTTAGGTGGACTTTACATTACCGAGTTTATGT
ATTTGCACTTTTGAGGACGGTAGAGTAACTGAAGCGATTTAGAAAAACCC
GCAATTCCGCCCCGCAAAATCGAGGACGGTAAAAGTGCTGATTTACCGTC
GTCCTCAGCTGGTCAGGATCTACTCAAATTAGAACCTTACCGTCTCCGTC
GCTGAAAAACACACATACATAAACTCGCTATTCTGTGACATTTCGCAGGA
AAAGGGAAAATGAAAGTTTCCTTTGTATCGGCAACGAGTTGTAATGAATC
GTAGTAGCTCTATCCTCAGTAAGAGCTTAATTTGAATTGTTGATTTTAAA
TGATTTATTTCTTCTTTTTTTTCTAGAGTAACAAAGTACAAAGACAGGAA
TTTGATGTCAGGAGAAAATTTGGGTATTGTATTTGGCCCAACGTTAATGA
GGGCGCCCGACCATTTAGCTATGGAAGCGGTCGGTTATATACCTTACCAA
AAGAAGATTATCCAATCGTTGATTGAAGAGCAAGATGTTCTCTTTGAAAG
ATAAATTATGATCTCTCTTGACAGTTGACAGACAGTGTTGGTGCGAGTTT
ATGTATCTGTGTTTTTCTGCGACAGAGACGGTTAGTTTTTCAACTGTCTA
GATCCTGATCCACTCAGAACAAATCCAGCACTTATACCGTCCTGGACTTT
ACGGATCTGCTACAAGCTGTTCCCAATCGATTTAGTCACGCAGCCGTTCT
CATAAATGCAGATATATAAACATAAACTCGCATGTGTTGGATATTGGAAG
GGGCTTCAAAGCTCACGACAGTCCTGAACTATGCTTTAAATTGTCCCACA
AGATCTCGCTTGTTCAAGTCTGCTTTTAAAATAAACTTAAAGGGAACGAC
GCATGGTATATTTATGAAATGCTGATCTAGCATTGGCACAAACACCCATA
CGGAGGA Coding sequence (CDS) from alignment at sc0000104_pilon:510096..516702- >MSTRG.13264.5.p1 ID=MSTRG.13264.5.p1|Name=MSTRG.13264.5.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3480bp|location=Sequence derived from alignment at sc0000104_pilon:510096..516702- (Clytia hemisphaerica_ch_hm2_pilon)
AGTAACAAAGTACAAAGACAGGAATTTGATGTCAGGAGAAAATTTGGGTA
TTGTATTTGGCCCAACGTTAATGAGGGCGCCCGACCATTTAGCTATGGAA
GCGGTCGGTTATATACCTTACCAAAAGAAGATTATCCAATCGTTGATTGA
AGAGCAAGATGTTCTCTTTGAAAGATAAAAATGGAGGATAAAAGTGACGT
ACTGAAGGCATTAAGTACGGCGCTGAAGAGTTTACCACCAGCACATTATG
AATTACTCAAATATTTCTGTCGTCATCTTCAACGAAGGGACAGTACCAGA
TATAACCGAACAGGCATTTGATGACATCAATGTGATTGCTGGTCTTGTCA
AATCATACTTTCGAACATTACCAATACCTGTCATCACCTTCGACCTTTAT
GATCAATTCATTGCTGCTGTCAATTGTTCATACGATTGCCACAAACAATG
CAGTACAATCATCCCCAACAATTGCAGTCCCGATCGAAAACTAGTTAAAC
GTGTCTTCGGTGTAGATCTGACGACACTCATCAAAGCTCACGACCAGAAA
CGACCACAGATTGTGGAATCGTGTGTTCATGAACTGGAAAAACGTGGATT
AGAATTGGAAGGGATATATCGTGTACCGGGTTTTGCTGATGATATCACGT
ATCTGAGGAACCAAATCGATAAAGATGACGTGGCAAGTCACTATAGAGTA
ACAAAGTACAAAGACAGGAATTTGATGTCAGGAGAAAATTTGGGTATTGT
ATTTGGCCCAACGTTAATGAGGGCGCCCGACCATTTAGCTATGGAAGCGG
TCGGTTATATACCTTACCAAAAGAAGATTATCCAATCGTTGATTGAAGAG
CAAGATGTTCTCTTTGAAAGATAAAAATGGAGGATAAAAGTGACGTACTG
AAGGCATTAAGTACGGCGCTGAAGAGTTTACCACCAGCACATTATGAATT
ACTCAAATATTTCTGTCGTCATCTTCAACGAAGGGACAGTACCAGATATA
ACCGAACAGGCATTTGATGACATCAATGTGATTGCTGGTCTTGTCAAATC
ATACTTTCGAACATTACCAATACCTGTCATCACCTTCGACCTTTATGATC
AATTCATTGCTGCTGTCAATTGTTCATACGATTGCCACAAACAATGCAGT
ACAATCATCCCCAACAATTGCAGTCCCGATCGAAAACTAGTTAAACGTGT
CTTCGGTGTAGATCTGACGACACTCATCAAAGCTCACGACCAGAAACGAC
CACAGATTGTGGAATCGTGTGTTCATGAACTGGAAAAACGTGGATTAGAA
TTGGAAGGGATATATCGTGTACCGGGTTTTGCTGATGATATCACGTATCT
GAGGAACCAAATCGATAAAGATGACGTGGCAAGTCACTATAGAGTAACAA
AGTACAAAGACAGGAATTTGATGTCAGGAGAAAATTTGGGTATTGTATTT
GGCCCAACGTTAATGAGGGCGCCCGACCATTTAGCTATGGAAGCGGTCGG
TTATATACCTTACCAAAAGAAGATTATCCAATCGTTGATTGAAGAGCAAG
ATGTTCTCTTTGAAAGATAAAAATGGAGGATAAAAGTGACGTACTGAAGG
CATTAAGTACGGCGCTGAAGAGTTTACCACCAGCACATTATGAATTACTC
AAATATTTCTGTCGTCATCTTCAACGAAGGGACAGTACCAGATATAACCG
AACAGGCATTTGATGACATCAATGTGATTGCTGGTCTTGTCAAATCATAC
TTTCGAACATTACCAATACCTGTCATCACCTTCGACCTTTATGATCAATT
CATTGCTGCTGTCAATTGTTCATACGATTGCCACAAACAATGCAGTACAA
TCATCCCCAACAATTGCAGTCCCGATCGAAAACTAGTTAAACGTGTCTTC
GGTGTAGATCTGACGACACTCATCAAAGCTCACGACCAGAAACGACCACA
GATTGTGGAATCGTGTGTTCATGAACTGGAAAAACGTGGATTAGAATTGG
AAGGGATATATCGTGTACCGGGTTTTGCTGATGATATCACGTATCTGAGG
AACCAAATCGATAAAGATGACGTGGCAAGTCACTATAGAGTAACAAAGTA
CAAAGACAGGAATTTGATGTCAGGAGAAAATTTGGGTATTGTATTTGGCC
CAACGTTAATGAGGGCGCCCGACCATTTAGCTATGGAAGCGGTCGGTTAT
ATACCTTACCAAAAGAAGATTATCCAATCGTTGATTGAAGAGCAAGATGT
TCTCTTTGAAAGATAAAAATGGAGGATAAAAGTGACGTACTGAAGGCATT
AAGTACGGCGCTGAAGAGTTTACCACCAGCACATTATGAATTACTCAAAT
ATTTCTGTCGTCATCTTCAACGAAGGGACAGTACCAGATATAACCGAACA
GGCATTTGATGACATCAATGTGATTGCTGGTCTTGTCAAATCATACTTTC
GAACATTACCAATACCTGTCATCACCTTCGACCTTTATGATCAATTCATT
GCTGCTGTCAATTGTTCATACGATTGCCACAAACAATGCAGTACAATCAT
CCCCAACAATTGCAGTCCCGATCGAAAACTAGTTAAACGTGTCTTCGGTG
TAGATCTGACGACACTCATCAAAGCTCACGACCAGAAACGACCACAGATT
GTGGAATCGTGTGTTCATGAACTGGAAAAACGTGGATTAGAATTGGAAGG
GATATATCGTGTACCGGGTTTTGCTGATGATATCACGTATCTGAGGAACC
AAATCGATAAAGATGACGTGGCAAGTCACTATAGAGTAACAAAGTACAAA
GACAGGAATTTGATGTCAGGAGAAAATTTGGGTATTGTATTTGGCCCAAC
GTTAATGAGGGCGCCCGACCATTTAGCTATGGAAGCGGTCGGTTATATAC
CTTACCAAAAGAAGATTATCCAATCGTTGATTGAAGAGCAAGATGTTCTC
TTTGAAAGATAAAAATGGAGGATAAAAGTGACGTACTGAAGGCATTAAGT
ACGGCGCTGAAGAGTTTACCACCAGCACATTATGAATTACTCAAATATTT
CTGTCGTCATCTTCAACGAAGGGACAGTACCAGATATAACCGAACAGGCA
TTTGATGACATCAATGTGATTGCTGGTCTTGTCAAATCATACTTTCGAAC
ATTACCAATACCTGTCATCACCTTCGACCTTTATGATCAATTCATTGCTG
CTGTCAATTGTTCATACGATTGCCACAAACAATGCAGTACAATCATCCCC
AACAATTGCAGTCCCGATCGAAAACTAGTTAAACGTGTCTTCGGTGTAGA
TCTGACGACACTCATCAAAGCTCACGACCAGAAACGACCACAGATTGTGG
AATCGTGTGTTCATGAACTGGAAAAACGTGGATTAGAATTGGAAGGGATA
TATCGTGTACCGGGTTTTGCTGATGATATCACGTATCTGAGGAACCAAAT
CGATAAAGATGACGTGGCAAGTCACTATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000104_pilon | genome | sc0000104_pilon:510096..516702 - |
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