|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000104_pilon:479494..486903- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13262.1.p1 ID=MSTRG.13262.1.p1|Name=MSTRG.13262.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7410bp|location=Sequence derived from alignment at sc0000104_pilon:479494..486903- (Clytia hemisphaerica_ch_hm2_pilon)
AATTTTTTTCAGCGCGAAAATTTTCAAAAAGCGTGGCCTGCAAGAATTTC
AATCGCACCACACAGCCAACAGCACAGCAGCACATATCTGTCTGGTTTCA
GTTCATTTCGGTCAGTTTCATTAATCATGGCAGAAAACAATGTCAATCAG
GTAGAAAATTAATTTTTCAAGGAAAGTACCCTCTTAATCATCGTCAAGTT
AACCAGCAGTAGGATAATCATCTGAAATCATTTATTAAAATATATAAAAC
ACTGTGTCAATCATCAATGTCCAGAATGTCAGAAATGTATCCATCATTTC
CACCACAAGCAAGCAAAATAAATACCGTCAAGAATCATTAATTCAGTCTA
ATACAAGCTACAATCATGGTAGAAACATATTGAGATTTTGGTGTATTTTA
GCGTTTTCAGAATTTAAAAGTTTGGGCGAGAGAATAGTTTGTTTGGGAGA
ACGCAACGACATATTGACTCAGTCATTAGTAAAAAACTTTTGAAAGGGGG
AGGGTTGCGACCCTTCTAAAGAGTGATTTTTTATGCTTAATTAACATCCT
GCTATAACCTGTGTAAAGTTAACATTTTCAATAGCATCATGGCGTATTCT
TTGTTTTAAAGTGTACATAGTAGGAGTAAATCTGGCGCCAGCTACTCTGA
GCCAATGCGCCAAGACCAATCTCGAGTCTGCGCCGGAGATATCCAAAGCA
ACCAAAGCAGCAAAATTTCAAAACAAATGTTTCTGCTCGCAGTCTAATCT
ACCATTTTAGAATCTCATATTTGCACACTAGCGAGTAGTTTTGGCGAATT
AGTCCTGGACAGAATCACGTGTAAATAAAACAGCGTGCTTGGATAATAAA
AAATCATGCGCGAGTATAAATTTTAAGATGGCGGGAATAGACCTTTTTGC
CGCCTTTCCATCTGCCATATTGAATTGTATGCAAAAATTATGGTGGCCGA
ATTGCTGTGGTGAAATTCCATTAGAAAGTATGCAAAACATATGCAAAAAG
AAAGTGTTAATATAATACTTACATGCATACTCTCGGGTGCCTAATAAACG
TACATGTACGTGTTTTGAAAGTTTAATGTGTGTACTCCGTCTTGGTGGAA
TTTTTTAATGGCATGAAAACAGAATATGCAATGTCTTTAAGAACAAATTT
CTAAAATGCTTTTGTTGTTCCTTAAATATTTCTTTTTGGATTAAGAAATT
CCATCTTATATTGTTCTAATAATTATAAAATTTATTTATAAGATGCTTTG
TTGTCTTTTTTTTTCTTTGTGTAAACTTGCATATGTTTTGCATACACGTT
GTCGTTTTTTTTTAATAAGGAACCTTAACTTTGCTCTGAGCCTGGAGTTC
CTTATTTTTCCAGAGCATTTCAGCCTCAAAGTTCCTTATCGAGTTCCTTA
TTTACATAGCTGCTCAGTTTGGATAACCATCTCTTACTGTTCCTTAAAAC
TTGTTTTCTTATTCTCAGCCTGAGCAGTTCCTAAACAATTCCTTATTTTT
TGAACCATTTTCAGCCTTGAGTTCCTTATAAACGTGTTCCTTATAAAAAA
AAACATGTACTTTCCAACTAAATCCAACCACGGCTTTTTCGTTCCTCTAT
TTTTGCATATTATTCAAGATGGTGGATGGAAAGGGGAAAAGGTCTATTCA
GATGTTTCTTGATGGCCAATTGACATCTAGCTAATCTCAAATTTTAATAA
TGATATTAAACATAACTATACATGACATCACTTATGATTAGGAGATATAC
ATTTTACAATCTTTTGATAATATTTAATTTCCTGCTTGTTATACTTGCAT
CCACCAAAGTGTGGAGTAATTAGTTATGTAAAAGACTGTTGCCTTCGCTA
AAAGGAGTATTGCTATTTTAGCACTTCAACTTTCTTTCATTGAATTGAAT
ATTTCAATTTGGAGGGGTTTGATGGCTCCTAGGCTATATTCCAAGCCTTA
TTGGAGCAAATTTGAGCTTTAAAATCCTGACATCCTAAGAGACACCGTCC
TGATATGAAATCAAATATGTCAATAAGAATGTCCTGGGTTGAAAATTTTC
TGAAAAATTAATTAGCAAGAGAGACTCTTTTTAGGTACCCAAGATTGATT
TGGCATTACACCATTGCAAAATATTTTTCATGGAAATTAACCTTTTCTAA
TGCTAATGTAATCTAAATAGGAAACAAATATTGAATTCTATTCTCTTTTG
CTCATACATTTTAAATTTCAAGATAAGAACAGCTATTAATAAAATAAATG
TAAATTGATATTGACATATTTAATGATGTCATAATCAATGCATACTCCAC
CTCCAGAGCACAGAAGGTTCTTATTTTATTTTCAATTTTTCACACAGACT
CAACATATTCTCACTTTTAAATCTCTTGGCCTTGGGATTTCTCCAAAAGC
CGATTAAAATAAGATATTTTTACATACTCCACAAAATACTTCATTTACAA
AATATCCTCATTGATGTAACTCTGAAACATATTATATTCAACAAACTTCG
AAACCTTAAAATTTTTAAAATTTACATAATTTCGAACACTTTGAGGGGTC
CATCAATTTCATCCACTGATATTTTACAAATTACATAGCTGTTTTAAGAT
AACGATCGCAAATGTCATAATCAATTTTGTCAGTGCTGTAAATTTTTAAC
AATCTCCTTTTCATTGGATAAATGCCATCAAAATATACAAAATTGGATGA
TTACACATAGATTTACCCCTGCAAATACAGCTTAGATTCTTATTCATTAT
GTCTATAAATTGAAGCTGGTAAAGACAATTGCATGGGTTAGGCGAACCCT
AAAAATATTTTTGTTTCCGGTCCACCGGGTGACGAAAAAACCACTCACCC
GGCCGGCCGCAAAAAATTTTTTTTTGCTAAATTTCGATCCCAAAACTCGA
TTTTTTAAAGCACTCGTAGAAGTTAAAATGATGGTCTTCTTTACCTTAAA
TCTGTAGTAACTTGACACTGCTACAGGCTTCGGCATAAGAAAAATTCAAG
TGTGATCATCGCACGCCTAGATTTTGATTTATAGTGGTCTAGGCGTGCGA
TTATTCAAATACTTAATTTTCATCGTTTATATTTTCAATTGTGTTACAAT
ATCTCTAAGAACTGGACACTCTCTTTCATTTTGAATATTTATCTTCAATT
GCTAAAGGCTCTAAACTGTGATTACGAAGTGAACCTTTTTGAGAAAAAAG
TAGAGTGAGAGAAACATTTCCCCAATTTTTTAAATCCTCACTTTATGAAT
GTTTCTTTTTATTTTACTCACAAGTCAGCATGATTCCATTTATAAAAACA
AAGATGTTTACTTACTGAAAAGTCCCCACTTTGTGAATGTTTCTATTTAT
TTTACTCATAAATCAGCATGATTCTTTTATAAAAACCAAGTTGTATATAA
AATAACATTCTTAAAAGTTGAGTTGCAAGCAAGAATTAAAACAAAAACAA
TGCAGGATTTAGTTTGAGATGAATAAAATTTCATTTCTATAACAATGATC
AGGATAAAACCTTCATTCCAAGTGATTTCTAGGCGTGCATTTTACAGTAG
AATATAAAATATCACGTGCGATAAATCACACGCCTCAAAAACTGATTCAC
TAAAGTTTTCCAAACAAACAAACTAACCCTAGCCCTAACAATGATGTACA
AAAAAAAATGCGGCCGGGTGACGACGAAATAAATTTTCACCCGGCCGGTG
GACCGGAAACAAAAAATTTTTTCGGGTTCGCCTTACTGGCGATTAATGGG
TTTTTTAAGCTATCTTCAGTTATAATAAAAGGTAGAAATAACTGAACATG
GAAAGGGTTCAATTTTATGTTTAGATTTCCATTTCCATTTATATTGGATC
TCCTTGCATGGTTTATAGACCATTCAATGACCCAAATAGCTCAAAATATT
CTATTGTTTCTTGCTATAGATGGCCACATTTTTTCTTTTTTCACACTTTC
CTTTCATGAAAAGTTGGACCCCATTCAGTAGGGTAGGCTCTAATCCCATA
CAGACCCAAGGATATTCCATCTCACCTGAGTGGGTTAGGCCTTAGCCCCA
CTCCATTTGAAAACTCCTTAAGTGGGATTTCGGCAAGTTTGGCTGGTTCG
GTTCTCATATGAACAGAATCCTTTTTTCATGCAAAATAGTATAAAGGAGA
GATGAATCTCAAATGAGATCCCAGTCTGTTGGCCTGCTTCCATGTTAATG
GCCCCTTTATTTCAATATCCTTATCTTGGCCTTTATTGATTATTTAATTG
TTGGTTCATTTCAGTTGATATGATTATTTTTTAGGCAAAGACCAAGGTTG
CAGATAAAGAGCAAAGTAAGAGCTTAACTTTAGTTGAGTAAGAAAATAGG
GCTAGATTTGTATGCTCTTTTTATAAGAATAACCTTTATAGAAATATTAT
GGTTAGTTTTTTGAGTTAAAACTTTTGAGTTTAGAACACTAGAGAAAAAG
AATCTTCCTCAGACTAACTATTCCAGACTCTATTCTCATGAAAAGCAGGT
ATTTTTTTCTTTAAGTTTTTATCTTATGATCAAGATTATTACTAATGTCT
GTCCAGATATAATTGGCAGTGGAAACAAGAATGCCTGTAACTTTTGATAG
TCAAATATAATATAGTTTCGAAATAATAAATGATACCAATAGCAATAATA
CCAATGCACCAACACTTAACATTTTCCAACGTTTAATTGCACAGTTCAAA
AAAGATAACATGACCCCCGTTTTTAGTAATAAGTTGGAGATTTGATATTT
CACAGAAAAATGCTACCAAGGGGTATTTCGGGTCCCATATCTTCTGAAGG
ACTTTTTTTTGTGTTGCCTTTTTAAATTCTAACAAGGTTCTTAACGGTTT
AAAAGACTGTTAAATTAGAAAAAAATCAATTTTTGCATAAAAAATGCAAC
CGCATCGAAAAATCGCGAAATTTACCAAATAACCATTCACTGCCAAGTCT
AAAAAATTTTTAACAAATATATTGGAATGAAATTCTTAAAAAATTAACGA
ATTTTCAATGCTGAAAATTGACATCAATTACTTATGGCCCAAGTTGGAAA
ATAACTCAGAAAGCCAAATAGAATTAAAAATTCCAGTAGTCTTAAAAATT
CAAAAATAAGAAAAAAAGAGAAATGTTCCGAAAAAATTCTAAAATAAAAT
GAGTTAAAAATAAATTTGAAGTTAAAGGAAGCAAAATAAACCGTTAGAAA
TGTAAAATGACGTCAAAATTCCAAAAATGACTCGGGATAAATAACTCGGT
TTTTTTCGTAATTCGGTTTTTTTAACTCGGAAAAAATAACTCGGGAATTC
CGGGCCTCTGACTTTATAACCTTAGAACTTCATTCTAGAACTACTAATAA
GCAGTTTTTTTATTATTAGGTTCTCAATCATCAAGTGGCGAGCAAAATCA
ACAATCAGAGATGAACTTTCAGAATGTCACTGAAGCATGCCAAGGTTATT
TTTGAAATTTATTTGAAACATGTCAGAAGCTTTTTTCAGTATAATGAAAA
GGGAATTTCGGCGTGGAATTCTGGGCAAGGGAGCCAGTGTGAGATATATA
AATAGCCGTATCAAAAGCGCAAATTGGGCTAACTTGTTTTTTCTGATTTT
ATTATAACCTTGCTTTAAAATGGAGGGGGTTAATCTAAAGAATCCTACAT
CTACTAAAAATAGACAAAAAGAAGGACAAATTTCATAAAAAATGACATAT
TGCGCATCCACAACCCCGACCCTGTTAGTTTGTCCATGTTTATCACAGGA
TTTAACTACATATGGCTAAAAGAAAGAGAAATTACGCATGCGTGTTATAA
TGCAGGATTTTTTAGAGGAACAGACTGAAATTGAGGCGAATATATTGAAT
TTTTAGTATTTGTTGATTTATGATGTAATCATTTTTATTGCATCTTTAGG
AATCAAGCAAGAGTTTGCTTATTCATTTTCAAAATGGGCGGCAGCCTTTC
AGTAAGTGAATTTAAACTACAAAAATCAATTTAAAATGAAACATAAAAAG
GGACTAATATTAAAATTTGACCGTTCACAAAGACATTCCCATAGACTTTT
TTACGTTTTACTTACCTTGAGGGAATTAATTTTGGCGAGCATGAAAATCC
TAAAAAATTTTGATCTCAACAATAACGAATTTTTTTAAGTACTTTAATGG
GATAAATTTTCGCGGGAATTAATTTTCGCGGATTTCCCGGATTTCCCGGA
TTTGGGTGTCATCCGCGAAAATAAGTCCCATTGGAAATTTGAAAAAGGCC
CATCCGCGAAAATTAGTTTCAGCAAAAAATTAGTTTCAGCGAAAAATTTG
AATTTTTTTTGCAATCCGCGAAATTTCTATTTTTATCGTTTTTTATTTTT
TTTCTACATGAGGGCACGCAACCCTCGAAAAAGGTCAAATCCTCGATATG
CTTGTTAGCAAAAAATCGTTTTCCTCAAAATTTTCTTCACAAATTTAGAA
ACTTGGAAAAGGTATTGGAAAATTTTTTATCTAAAGTGATCGCTTATTAA
AAGCTTTTCAATGCAAGAGGGTAATCCAACTGGCTTGAAATTTAACATTT
AAAATGATATGTAAGAAAAGGAGGGAAAACGGAAAACAAAATTCTTAATT
TCCTGGAAAAAATTTATTTCAATGTTTTGACCCTTTTCAAAAATTTTAAT
TTGTACCCCAATCCGCGAAATTAAATCCCCGCGAAAAATCAGGAAATCCC
TCATCCGCGAAAATTAATCCCCGCGAAATCTTAAAATTTTGCGGATGAGC
TCAACCGCGAAATTTAATCACCGCAAAGATTTATCCCATTAAAGTAGTCT
AAAGGTACACTATTTCCATTTTACTAAGTGTGTAAGGTTCTGGGTTGATT
CTCAAATTAGGTCTAACCTATTTAAAAAATAGTACTTTTTACCTCTGCTT
AATGTTTGTCGATTTAAAGCGTAAACAATGGTCAGCTAAACCAAAGAGAA
TCTCTCTACTGTGGTAATTGTTCTAAGAATATTTTAATATCAGAAAATCA
TACAATGTTTTGATATCCTATTATATCCTATGAGATGGTGCCTCTCTGCC
TAATGTTTATCAGTTGAAGCATAGACTGAACTGAACTGACAACTAGAGCC
AAAGGGAGAAAAACTGTTATAAGAATACTATAAGGAGTTTTATTTGAATC
ATAAAATCTTGAAGTCCTACTTTTGTGTTTTTAGAGAAAGTGAAAAGATC
GACATGTTTTTCGAGAAAAGGTTGGATGAGCTTATTCAAGAAGCAGAAAA
AGCCGAAGACATTTTGAAATCACAGAAGGCAGCTTTAAAAGAGAAATTAA
GATGTTTGACAAAGACATTAAATCAAGTTGTAGAAAATGAAAGTTAAAAT
AAATATAATGCAGAATCTTTAGTCAAATTTTGTTCTTAATAAAATAGAGT
TCGATCCCAG Coding sequence (CDS) from alignment at sc0000104_pilon:479494..486903- >MSTRG.13262.1.p1 ID=MSTRG.13262.1.p1|Name=MSTRG.13262.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2355bp|location=Sequence derived from alignment at sc0000104_pilon:479494..486903- (Clytia hemisphaerica_ch_hm2_pilon)
AGAAAGTGAAAAGATCGACATGTTTTTCGAGAAAAGGTTGGATGAGCTTA
TTCAAGAAGCAGAAAAAGCCGAAGACATTTTGAAATCACAGAAGGCAGCT
TTAAAAGAGAAATTAAGATGTTTGACAAAGACATTAAATCAAGTTGTAGA
AAATGAAAGTTAAGAATCAAGCAAGAGTTTGCTTATTCATTTTCAAAATG
GGCGGCAGCCTTTCAGTTCTCAATCATCAAGTGGCGAGCAAAATCAACAA
TCAGAGATGAACTTTCAGAATGTCACTGAAGCATGCCAAGGCAAAGACCA
AGGTTGCAGATAAAGAGCAAAAATTTTTTTCAGCGCGAAAATTTTCAAAA
AGCGTGGCCTGCAAGAATTTCAATCGCACCACACAGCCAACAGCACAGCA
GCACATATCTGTCTGGTTTCAGTTCATTTCGGTCAGTTTCATTAATCATG
GCAGAAAACAATGTCAATCAGAGAAAGTGAAAAGATCGACATGTTTTTCG
AGAAAAGGTTGGATGAGCTTATTCAAGAAGCAGAAAAAGCCGAAGACATT
TTGAAATCACAGAAGGCAGCTTTAAAAGAGAAATTAAGATGTTTGACAAA
GACATTAAATCAAGTTGTAGAAAATGAAAGTTAAGAATCAAGCAAGAGTT
TGCTTATTCATTTTCAAAATGGGCGGCAGCCTTTCAGTTCTCAATCATCA
AGTGGCGAGCAAAATCAACAATCAGAGATGAACTTTCAGAATGTCACTGA
AGCATGCCAAGGCAAAGACCAAGGTTGCAGATAAAGAGCAAAAATTTTTT
TCAGCGCGAAAATTTTCAAAAAGCGTGGCCTGCAAGAATTTCAATCGCAC
CACACAGCCAACAGCACAGCAGCACATATCTGTCTGGTTTCAGTTCATTT
CGGTCAGTTTCATTAATCATGGCAGAAAACAATGTCAATCAGAGAAAGTG
AAAAGATCGACATGTTTTTCGAGAAAAGGTTGGATGAGCTTATTCAAGAA
GCAGAAAAAGCCGAAGACATTTTGAAATCACAGAAGGCAGCTTTAAAAGA
GAAATTAAGATGTTTGACAAAGACATTAAATCAAGTTGTAGAAAATGAAA
GTTAAGAATCAAGCAAGAGTTTGCTTATTCATTTTCAAAATGGGCGGCAG
CCTTTCAGTTCTCAATCATCAAGTGGCGAGCAAAATCAACAATCAGAGAT
GAACTTTCAGAATGTCACTGAAGCATGCCAAGGCAAAGACCAAGGTTGCA
GATAAAGAGCAAAAATTTTTTTCAGCGCGAAAATTTTCAAAAAGCGTGGC
CTGCAAGAATTTCAATCGCACCACACAGCCAACAGCACAGCAGCACATAT
CTGTCTGGTTTCAGTTCATTTCGGTCAGTTTCATTAATCATGGCAGAAAA
CAATGTCAATCAGAGAAAGTGAAAAGATCGACATGTTTTTCGAGAAAAGG
TTGGATGAGCTTATTCAAGAAGCAGAAAAAGCCGAAGACATTTTGAAATC
ACAGAAGGCAGCTTTAAAAGAGAAATTAAGATGTTTGACAAAGACATTAA
ATCAAGTTGTAGAAAATGAAAGTTAAGAATCAAGCAAGAGTTTGCTTATT
CATTTTCAAAATGGGCGGCAGCCTTTCAGTTCTCAATCATCAAGTGGCGA
GCAAAATCAACAATCAGAGATGAACTTTCAGAATGTCACTGAAGCATGCC
AAGGCAAAGACCAAGGTTGCAGATAAAGAGCAAAAATTTTTTTCAGCGCG
AAAATTTTCAAAAAGCGTGGCCTGCAAGAATTTCAATCGCACCACACAGC
CAACAGCACAGCAGCACATATCTGTCTGGTTTCAGTTCATTTCGGTCAGT
TTCATTAATCATGGCAGAAAACAATGTCAATCAGAGAAAGTGAAAAGATC
GACATGTTTTTCGAGAAAAGGTTGGATGAGCTTATTCAAGAAGCAGAAAA
AGCCGAAGACATTTTGAAATCACAGAAGGCAGCTTTAAAAGAGAAATTAA
GATGTTTGACAAAGACATTAAATCAAGTTGTAGAAAATGAAAGTTAAGAA
TCAAGCAAGAGTTTGCTTATTCATTTTCAAAATGGGCGGCAGCCTTTCAG
TTCTCAATCATCAAGTGGCGAGCAAAATCAACAATCAGAGATGAACTTTC
AGAATGTCACTGAAGCATGCCAAGGCAAAGACCAAGGTTGCAGATAAAGA
GCAAAAATTTTTTTCAGCGCGAAAATTTTCAAAAAGCGTGGCCTGCAAGA
ATTTCAATCGCACCACACAGCCAACAGCACAGCAGCACATATCTGTCTGG
TTTCAGTTCATTTCGGTCAGTTTCATTAATCATGGCAGAAAACAATGTCA
ATCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000104_pilon | genome | sc0000104_pilon:479494..486903 - |
|
