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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000104_pilon:443496..446943+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13257.1.p1 ID=MSTRG.13257.1.p1|Name=MSTRG.13257.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3448bp|location=Sequence derived from alignment at sc0000104_pilon:443496..446943+ (Clytia hemisphaerica_ch_hm2_pilon)
TATAATTATATATTTTAATGTTTGCTGAATTACATATTGTTTCACAGTCG
AAAACATacaaaaggaaatcaaaattttgcacaagGATTCTcttattgat
tttgattttagttgGAATTGGTTTTGATCTTATCCTCATTTTTATCAAAG
GTAAGTGATTTTGGGGCCTTTTTGCATGTGCCAATACCACATGGTTAAAC
AAGACTTTATTTTAAGACGTAATCTATTCCAAAAaccagtacacgttttt
ttataagaatatcccaaattttgaaaaacttcagatgttcttaaaagTAA
ATAGTTAAGCTTAAGAATCttctaaaaatgctcttaactttgcACCATTT
GATTATatttgcctaaaaatgttcgtaagttattctcaatattttggccg
tcgaagcctaatgtttttatatagtttgttcttataaaaaaagataaatg
aaaGATTCAAGACTCTCTCTCTCCCATCGTTCTGCATCATAACCCTCAAc
aaagctatatccaccatctttgattaaAGTTTTTGGGAAAGGATACCTAA
AGTCCATTTTTATTGGagtaattttataagaacagctgagcctcaaaaga
aatttactggttcttataaaagaagatTGTTGCTTTGACGTCGTGCAAAA
TTGTAGGAACTGTAGCGGCTTCTTTGTGAATATCCCTTTTCAAAAACTCC
AAAGAAAACTCAAACAGAACCCTAAAAAAGTCAGCATTTTACCTTTAGAA
AAGTTGCTCaatttcttttacatttttgtaacatgctcatttttgaattt
gagcctttgtatgcttataaacgttatgcttgtaaaaaaaatgtatCGTT
TATCCCgtgcattgggctcttccagaaaatgtccctACATGGGGGCCCAt
cagcgaaaaatcatcaaaatttgccttctcCGGGGGATAAATTtgctgtc
cgggggtaatttgggttgttcgggggtcaactgatgcttgtccgggggta
aaacccgtagatcactgaaaattgttatatcctccgtCCCCCATACTCAG
ATTTTTTCCGGAAAAGCCCATTGTAACCATTGTGTGAAGAGAGGTACTTA
TCCTCCTTTTTACATCTTGTTTTTCAATCCCCTGATAATTCCATTCCCCA
GTTTATTTGATACGGGATACTCATACGGATAGGATACGGATACGTTATCA
GAGTATAACGTGCTCAACTCCTGAGAATGTATTCTCAATTTACATTTTAT
ACTACTTCGTTTGTCTTAGGATGAGGTTACTCGCTGTTATCTTATTGGTC
ACCATTGCTGTGGATATCTGTAGCACCAAACATCATCACCGAAACCATCA
CCAGAAACTTGTAAAGGAAGATAGCAACACAGTAAAAGGACATGTCCGAA
GCTTATCATCTGAAGATGATATCGAGAATGAAAATACCGGACAGAAGCGG
ACAGTATACGAATCCTTACAAGAGCAATTTCCAATAGAAAAACGAAGAAT
GGTTGCCAGAGCTTATAGAGAGGTTCTGAGTAACGTTTTAGAAGCACCAT
CTGATGATTCAGCTTTTGATGGAATTGGTCCACACATGATTGCTATTTTG
GAGGTTTTCCAACGAAATGGAGGTGATATATTCAAACAGGTTCGCAAAAA
GATGGATATTTCTCCAAAAGAGTTTTACCAGACCATCATTGCTCAGAATG
TGGATGATATTAAGGATATTATTGATAACAAAAAGGTAACCAAACCGCAA
TGGATTGCACTAAAAGCCAACAAATATAGATTTATGCCTGCCTCTAAGCA
TTATTCATCAGCTGAATATACCAGAGACTTTTTTGCAGATATTATGGCGT
TTACTATTGTATATGTTGGAGCAACTCTTGATTTGGCTTTCAAAGGGGAT
GTATATGAATGTGAGCTTGCCAAGGAGTTAGATCTGTTGAAGAATGATAT
TGAAACAAGCGTCCAAGTATTGATTTATAAGCGTTTGAAAATGTTGGAAC
CGCATTCATCAGATTGGAAATGGATGGACATCACATACACAAGCCATGAT
AAGATTCAGTACAAAGATACCTATCTAAAGAAGCTGCTCTGTGAGGAAGG
TGGGTGCGAGTTGAGGAGGGACGGCAGGGAGCCCATTGCTGAAAAATTAC
AGGAGGTTGCCAAGTCCGTCACCAAAGATGCTTTACCCATGTTCGAtttc
ttaaataaatttttggagCTGTTATCAACagaaaaagaattttgtttCAA
GTCTTGTTTATGCCCACCTGAAGATGAGCCAATAAAAATGGAGCAAAAAG
ATTATGTCGTCGAGATACCATGGGGATGTCTTGGTAAACCAGTCGATAAG
AGTAAAGATTGTATGTTGGTTTGTGGCAAATATGGCGAGAAATATGATTG
GTGTCCTACACAAAAGAAAACGAGAGCAAGTTCATGGTCGAAATGCAAGC
AAGCAAATTTTGAAAGATGTATTGAAGGCTGGTATAAGTAATGGATTGTG
AATCTAGATCTGGACATTATGTAACCCTGTTGGACAACAAGACGGCAACA
AGGCGGGCAGAGAAATGACTTACTACTATGTTAAAAAGCTTGCTTATCTG
TAAGTGGGAAGGCAAAGAAAGCTATGTATTCCAATTTATGAAACAGTACG
ATACGATTATTTGTCGAACTTGGATTAGATTAAAACGAGATTCGCGATAC
ATTAACAACGAGCTATCCGTAGATTTATAAGAATTTATAAGAGGTTAAAC
TGATAACAATTTAAGAACGTTTAAAAATTAGTCCTTCCAAACCCTTTAGC
TTTAGCAAATTAATTAAGTATATCTTAGAAACGTTTTAAGAATCACGAAA
AATAAGATCAGCCGAGTCTGAACCAAATTGTACTGGTTCTTTTATAAATA
AGTGTAAATGCGTTCAAAGAAGCAAGAATAAGCTATTCAGTTTGGAAAGT
AACaaaaaaaGAGTGtcatacacccccttctcatagccCCACTGGAACCC
Atgcccactggaaaaattggtcaaaatatcgtccccgtcggaaaattatc
ctccaatttttgtacCCACtatagaaataatcaaataaataaatcctCAC
TGCCAAATATTAtggtatttttcccatccccactgatttttttgacttga
aaacaaaagaataggAATCCCCAGCCCTAAtaaatatgagaatatcaatt
cccatcgagtttcagtccgttatttttatccccactggctgaaaaaatcc
taccggatctgtgagaagggggaaTGTTTTCACatagaaacctttttttt
attttgatatcaataatcaattttatttcaaaatagtGTCTTCTTGATGT
AATTAGAGCTTTGtatataaatagataatatattaaaacataaattaata
ctttaaaatatttcaaaatattgaacacTAATAATTCATCTGgatact Coding sequence (CDS) from alignment at sc0000104_pilon:443496..446943+ >MSTRG.13257.1.p1 ID=MSTRG.13257.1.p1|Name=MSTRG.13257.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1221bp|location=Sequence derived from alignment at sc0000104_pilon:443496..446943+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGGTTACTCGCTGTTATCTTATTGGTCACCATTGCTGTGGATATCTG
TAGCACCAAACATCATCACCGAAACCATCACCAGAAACTTGTAAAGGAAG
ATAGCAACACAGTAAAAGGACATGTCCGAAGCTTATCATCTGAAGATGAT
ATCGAGAATGAAAATACCGGACAGAAGCGGACAGTATACGAATCCTTACA
AGAGCAATTTCCAATAGAAAAACGAAGAATGGTTGCCAGAGCTTATAGAG
AGGTTCTGAGTAACGTTTTAGAAGCACCATCTGATGATTCAGCTTTTGAT
GGAATTGGTCCACACATGATTGCTATTTTGGAGGTTTTCCAACGAAATGG
AGGTGATATATTCAAACAGGTTCGCAAAAAGATGGATATTTCTCCAAAAG
AGTTTTACCAGACCATCATTGCTCAGAATGTGGATGATATTAAGGATATT
ATTGATAACAAAAAGGTAACCAAACCGCAATGGATTGCACTAAAAGCCAA
CAAATATAGATTTATGCCTGCCTCTAAGCATTATTCATCAGCTGAATATA
CCAGAGACTTTTTTGCAGATATTATGGCGTTTACTATTGTATATGTTGGA
GCAACTCTTGATTTGGCTTTCAAAGGGGATGTATATGAATGTGAGCTTGC
CAAGGAGTTAGATCTGTTGAAGAATGATATTGAAACAAGCGTCCAAGTAT
TGATTTATAAGCGTTTGAAAATGTTGGAACCGCATTCATCAGATTGGAAA
TGGATGGACATCACATACACAAGCCATGATAAGATTCAGTACAAAGATAC
CTATCTAAAGAAGCTGCTCTGTGAGGAAGGTGGGTGCGAGTTGAGGAGGG
ACGGCAGGGAGCCCATTGCTGAAAAATTACAGGAGGTTGCCAAGTCCGTC
ACCAAAGATGCTTTACCCATGTTCGAtttcttaaataaatttttggagCT
GTTATCAACagaaaaagaattttgtttCAAGTCTTGTTTATGCCCACCTG
AAGATGAGCCAATAAAAATGGAGCAAAAAGATTATGTCGTCGAGATACCA
TGGGGATGTCTTGGTAAACCAGTCGATAAGAGTAAAGATTGTATGTTGGT
TTGTGGCAAATATGGCGAGAAATATGATTGGTGTCCTACACAAAAGAAAA
CGAGAGCAAGTTCATGGTCGAAATGCAAGCAAGCAAATTTTGAAAGATGT
ATTGAAGGCTGGTATAAGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000104_pilon | genome | sc0000104_pilon:443496..446943 + |
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