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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000104_pilon:437529..441702+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13256.4.p1 ID=MSTRG.13256.4.p1|Name=MSTRG.13256.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4174bp|location=Sequence derived from alignment at sc0000104_pilon:437529..441702+ (Clytia hemisphaerica_ch_hm2_pilon)
tttttttcacacATCAGTTAgtgaacaataaaaaaacagcTCATGTGAGA
GAACTGTCTCTCAATATTTTTCACTTGACAAGATTGCAAGATGGGATTCA
GAGATGAGTTTCGGTGCTCGAGTTTCGGTTTTGAGGGTGTGGAAAGATCA
GCACTCTACAAATCTTACGTGAGTTTTACCAATATTCATAAGTGTTAACt
cactctctaattcaaacctctattattcgaatccccttgaagatcgaatt
agagagggccAACTGTAAACGGGTTTCCTATCAAATTCAGTGGGGACAGA
AAAAATATTCTGTagtgagaaatttttttgaatttgatttctttattaGG
GACAAAAAATGGAGTACAATGTTCCAGTGGGGACGATACTTTGGCTAATC
TTTCCTGTAGGAGGGGGGTCCTGTAccgggtctttgagaaggggaTGTAA
TATTGAAGAGTCTAGCTGAACCTACAATcgcggtcaaaatatattgggaa
tgttggttaattcctcgttttcaacaatttaaagtttgggcgaaaaagtc
gcttttgggcaaaatgataaatttatattcgaatatttcatagacttcca
ggctatattctgagccctattggaccattcttggactttttaAGTCTAGC
gcccaacctaatttagagcgtttccaaatcgtttgtggctgTAAGATTTC
GTatgaatttctctttttctcaaatattatgactttgattgtacttTCAA
CCATAGATCAATGTTCCACGATGGTTTCGTCTTTCATCGCTCGGTTTTAC
GTGCGTCTACACATTTTCCATGATGATTGCTTCCATTGTGATTACGACTA
TGGAAGTACATCATAGTGGCTGGTTTCATTTTATGACGTCATGGAATTAT
ATGGTCAATGTCACTTATTTTATTATCGCCTTTGTTAAACATCTTCAATA
TCAAGGTTTGTATTGACACTCATTGGTTTAAAATCTGATTGATTAGTGAG
TGgataaatcacgacgacggatgAATTTTCTCTAGCCTTCATTCGCCCCA
CCGCACTTTTCTACGGGCTGGTCGGAAAACAAAGTCTAGCttgctacctt
aagggaagatattttggcgaatttggcgagtTGTCTAAAAAATTCGCCAA
Atacgccaaaatttcttcccgccaaatttgaatttataagtcattcgcca
aaattaattctcgcaaaattttgttttctttcaatttagtctctatttct
catataaaccacttttttcatccttttttAActaaaatattcaacaaaaa
atggatctttcgccaaaattaattctcgtcaaatttagagattttatcaa
ttcgccaaaataaattccgccaaattgcaccaaatttcttctcttaaggt
acccAGCAAAGAAATCAACATTGCTTCCAGAATGAATTTCCGCTTGATTT
TCCGTTCTAGAAGCAAAGCGGGAGAGGTGCAGCTTGTTTTCCGATCAGTC
CGTAGAAAAGTGCCGTGGCGCGAATGAAGGCTAGaaaaaaaTCGTCCGTC
GCCGTGATTTATGTTTCGATACTTAACTTCATTATTTGAGCTTGTTTTAG
GGCTTCTGTTGGGAGTTTTCAGACATCAGTCAGAGCAACTCTGGTCAGAG
TTCAAAATATAGTTCTTTAGCATattcaaaacatttaaattcATCTATTA
CCAAAAAAGTACGCCTcagaaataataataaaacagaaggttaatttgaa
attgaagactttAGGTCATCCCCAGTTTTAAGCGCGATATATACACATAA
TCTTTCGATTGGGGGTGGGGTTGGGAGGGAACTTGATATGAAAACTGCTA
TAAACTACTACTACCATATCCGGACAGAAATTAGGCCTCAACTTTGGTAG
GCCGCTCACCTTTCACTACTTCTTCCAAGAATATCGTGTACTCGACTCCT
TTACGGCGTTTAAGGTTGATTAGCCTATAATAGGTAGGCAGGGCTATCGG
TAATTCTATTCCACTTTGTGACTTTTTCGAAAGATGAGAGCTCAGGTTTt
tgggctctaaacattcgatttttggaTGCCACTAAAACTCTAGAAACGCT
TGCAGTAAAGTAGCAGAAATATCGTATTATCGTCAAATTACTTCAAGGCC
TTCTTTTTCCGAAATTCTTCAAAGTGTGACTCGCCAAGAAACGGAGTAAA
AATTGCCGGTTTTTGGTGAAGTGCTCACTTAGGGTTGATATGTGTATAGA
GCCAATTCAGTCAGTGATAAGATATCCTCAATCCTTGTAGGAGTTTATTA
TGAAAAGACCATTAAAGTTTCGTTTCATCCATAGGTGATGCTGATGAAGG
GTACGAAGTGATCAGAGACGAAGCTGTAGGTCTAATGGCTGGTGACGAAA
GCAAACATGAGGTATTCATGGAAAAAGGAGTGGTCCTCAGTGATCCCCTA
GTCCTCGATACAATCCCTTCCAAAATGTCAATAAGTGACAAAGTCTATTG
GTTCTTTCATTCTCTGGCTTTCTTAATGTCTTCCGTGGTCGTTGTAGTAT
ACTGGCCAATCCTGTTCGACCCATCTTCATTTGAGAACGATTTTCATTGG
TTCCAAACAATTGATCGGCACGGGATTGTATATCTCTTGTTCATTTTCCA
ATACATCTTCAACAAGATTCCAATCCGTATATTCCACTGTGTGTATGCTA
TCGCAGTTGCTGTCATCTTTTTTATTCACACCTATATTTATTACTTGGTG
ACCAGCAGATTGGTTTATTCCATCTTTGATTGGGGTAATGCACCTTTGAA
AGCGTTCTACTACTTCCTGGGAATTGTTGCGTTGGCTATCATACTACAAT
TCATCTTATACGGTATTGATCGATTTAAGCATTGGCTTGGTAATCGAAAA
TGAACAGAATCGTCGAGTGATAATTATTCTCATGGGCTAAACATTTTCTG
AATTTCTTATCAATCTGGGGCATGAGTTTTAGCATTTTCAcgtcattttt
tagcatttcaaCGTGAAAAAATCACGTTGTAGATCCCATGCGGCATACAT
ATCTTTAAtgtttcataaatgtatatCTTTAATGTTCGATCTCCCCAGGT
CAATATTATAAATGTAGTTCTAGCTTagattttagaatattttatAttgt
aaagTTAAGTTTAAAGGCCTTTTTCTATATAATTTTCGCGATATTGGTTG
ATTTGAATTAGAACCAGATAGTATCTATATTTCTTATTAATTGGTATTTC
ACTTGTTCTCACCTTCAAAATATGAAAACGTGGATTAATGGAACGCCAAT
GGAAGTCAATAATGAAAGAAACTTTTTACTatgattacaatatagtcaat
AACAGTAGCAAATTTCTGTAAAAACTTTGGAATTTGATGGATCCATGTTT
TATATGTAAGTGTCTATACCAGGCTCGCATtattcttaaacaatagaacc
aTTATTTAGGTATCAACTGATACTGCATTTGCTTATaaatgttatgctta
taaaaacatgtaaaatattgataatttgacGGTCATTTTAACAATATCAT
TATATTTTCTTTAGTATAAACACTTAGTTGAAGTATAGGAATAAATTTTC
ATCAGCTACCAGTAGATATCCCTTTACCCAGTAGGTACCCTCTATCTGAA
AAATAAGGTGGAATTCGaggttgatttttttgtgttgaaaggTTACTTTG
ATGGGAtgaactttcgcggggattaaatttcgcggttgggtctatccgcg
aaattcaaaaatttcgcggggacttaatttcgcggatggcactattgggt
ggcaatattttcacgattttgtgacttttactgtcgaatcatgcatgttg
gttgttgaaatacacattattagcgcttctttgatgcaagtaaccactca
aatagtatttatttgatgACATagtttgagttttgtttagaaatatttcg
cggatgatgCCCTTCTAAATtcccattgggacttaatttcgtggatttgt
ccaaaaataaattattaatgTTATACAAAAGCCTTTTGAGATCAAGGTTA
GAATATTCGCATATTTGTCTACTTTCTATTTCCAATGCTCAGATgtacaa
tatggaaaaaatacaaaatagggCACTAAGAATTATCTTAGGGAAACCTA
GATGGACTAGGATAACTGAATTAT Coding sequence (CDS) from alignment at sc0000104_pilon:437529..441702+ >MSTRG.13256.4.p1 ID=MSTRG.13256.4.p1|Name=MSTRG.13256.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2538bp|location=Sequence derived from alignment at sc0000104_pilon:437529..441702+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGATTCAGAGATGAGTTTCGGTGCTCGAGTTTCGGTTTTGAGGGTGT
GGAAAGATCAGCACTCTACAAATCTTACATCAATGTTCCACGATGGTTTC
GTCTTTCATCGCTCGGTTTTACGTGCGTCTACACATTTTCCATGATGATT
GCTTCCATTGTGATTACGACTATGGAAGTACATCATAGTGGCTGGTTTCA
TTTTATGACGTCATGGAATTATATGGTCAATGTCACTTATTTTATTATCG
CCTTTGTTAAACATCTTCAATATCAAGGTGATGCTGATGAAGGGTACGAA
GTGATCAGAGACGAAGCTGTAGGTCTAATGGCTGGTGACGAAAGCAAACA
TGAGGTATTCATGGAAAAAGGAGTGGTCCTCAGTGATCCCCTAGTCCTCG
ATACAATCCCTTCCAAAATGTCAATAAGTGACAAAGTCTATTGGTTCTTT
CATTCTCTGGCTTTCTTAATGTCTTCCGTGGTCGTTGTAGTATACTGGCC
AATCCTGTTCGACCCATCTTCATTTGAGAACGATTTTCATTGGTTCCAAA
CAATTGATCGGCACGGGATTGTATATCTCTTGTTCATTTTCCAATACATC
TTCAACAAGATTCCAATCCGTATATTCCACTGTGTGTATGCTATCGCAGT
TGCTGTCATCTTTTTTATTCACACCTATATTTATTACTTGGTGACCAGCA
GATTGGTTTATTCCATCTTTGATTGGGGTAATGCACCTTTGAAAGCGTTC
TACTACTTCCTGGGAATTGTTGCGTTGGCTATCATACTACAATTCATCTT
ATACGGTATTGATCGATTTAAGCATTGGCTTGGTAATCGAAAATGAATGG
GATTCAGAGATGAGTTTCGGTGCTCGAGTTTCGGTTTTGAGGGTGTGGAA
AGATCAGCACTCTACAAATCTTACATCAATGTTCCACGATGGTTTCGTCT
TTCATCGCTCGGTTTTACGTGCGTCTACACATTTTCCATGATGATTGCTT
CCATTGTGATTACGACTATGGAAGTACATCATAGTGGCTGGTTTCATTTT
ATGACGTCATGGAATTATATGGTCAATGTCACTTATTTTATTATCGCCTT
TGTTAAACATCTTCAATATCAAGGTGATGCTGATGAAGGGTACGAAGTGA
TCAGAGACGAAGCTGTAGGTCTAATGGCTGGTGACGAAAGCAAACATGAG
GTATTCATGGAAAAAGGAGTGGTCCTCAGTGATCCCCTAGTCCTCGATAC
AATCCCTTCCAAAATGTCAATAAGTGACAAAGTCTATTGGTTCTTTCATT
CTCTGGCTTTCTTAATGTCTTCCGTGGTCGTTGTAGTATACTGGCCAATC
CTGTTCGACCCATCTTCATTTGAGAACGATTTTCATTGGTTCCAAACAAT
TGATCGGCACGGGATTGTATATCTCTTGTTCATTTTCCAATACATCTTCA
ACAAGATTCCAATCCGTATATTCCACTGTGTGTATGCTATCGCAGTTGCT
GTCATCTTTTTTATTCACACCTATATTTATTACTTGGTGACCAGCAGATT
GGTTTATTCCATCTTTGATTGGGGTAATGCACCTTTGAAAGCGTTCTACT
ACTTCCTGGGAATTGTTGCGTTGGCTATCATACTACAATTCATCTTATAC
GGTATTGATCGATTTAAGCATTGGCTTGGTAATCGAAAATGAATGGGATT
CAGAGATGAGTTTCGGTGCTCGAGTTTCGGTTTTGAGGGTGTGGAAAGAT
CAGCACTCTACAAATCTTACATCAATGTTCCACGATGGTTTCGTCTTTCA
TCGCTCGGTTTTACGTGCGTCTACACATTTTCCATGATGATTGCTTCCAT
TGTGATTACGACTATGGAAGTACATCATAGTGGCTGGTTTCATTTTATGA
CGTCATGGAATTATATGGTCAATGTCACTTATTTTATTATCGCCTTTGTT
AAACATCTTCAATATCAAGGTGATGCTGATGAAGGGTACGAAGTGATCAG
AGACGAAGCTGTAGGTCTAATGGCTGGTGACGAAAGCAAACATGAGGTAT
TCATGGAAAAAGGAGTGGTCCTCAGTGATCCCCTAGTCCTCGATACAATC
CCTTCCAAAATGTCAATAAGTGACAAAGTCTATTGGTTCTTTCATTCTCT
GGCTTTCTTAATGTCTTCCGTGGTCGTTGTAGTATACTGGCCAATCCTGT
TCGACCCATCTTCATTTGAGAACGATTTTCATTGGTTCCAAACAATTGAT
CGGCACGGGATTGTATATCTCTTGTTCATTTTCCAATACATCTTCAACAA
GATTCCAATCCGTATATTCCACTGTGTGTATGCTATCGCAGTTGCTGTCA
TCTTTTTTATTCACACCTATATTTATTACTTGGTGACCAGCAGATTGGTT
TATTCCATCTTTGATTGGGGTAATGCACCTTTGAAAGCGTTCTACTACTT
CCTGGGAATTGTTGCGTTGGCTATCATACTACAATTCATCTTATACGGTA
TTGATCGATTTAAGCATTGGCTTGGTAATCGAAAATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000104_pilon | genome | sc0000104_pilon:437529..441702 + |
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