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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000104_pilon:404603..406898+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13254.1.p1 ID=MSTRG.13254.1.p1|Name=MSTRG.13254.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2296bp|location=Sequence derived from alignment at sc0000104_pilon:404603..406898+ (Clytia hemisphaerica_ch_hm2_pilon)
GGGTCTATTGGATCTGTGACAAAGGCGTGGGGTTATCAATAAATGTTCCT
CTTTTCATTTCAGTGTAAAACCAACCAAAATGAATGTAAATGCATTTTCA
ATTGCATTGCTGTTACATTATCTCAGTGAAACCAATGTGGTGGATTGCCA
AAGACCATCAGTCAGTTTACTGCTTCATCCGGATCGAAACTGGTCTTCCA
TAGGATGTCCTAGCTCAGTAACAAACCATGATTCACAAACAGATCATTTC
AAAGACAATAATGTTCGATTTATTTGTCGGTTAGTGGAAAGAGATAAACA
GATTGTTGACTATCCATATCATTTCACATTGTTTATGATGGTTGATTCGA
AATCGATTCTCAATTATGGTTGTCAGACAATAGGGCATTGTTTCTCAATA
AGTATTACACAACCTGGAACAGATCAAATCCAAATTGAGATCAAGACATT
TAAAGAATGCTTTACAGGTCGTATACCATTTCGTTTTGAATTACGGCAAA
TAAACACCTTAATAAGCGCTGGCACGCTGAATGTTATTTTTGCCCGACAA
GTTGTGGTACCTTTACGTCTCAATTTCCGTTTGAACCAATCAATGCCGAT
TGCTTTGGATGGGAATGTAGATATCCAATGCGCGGAAGATTTTAAAACTT
CAGTTTACGAGATGGTATATAGCGTTCGTGGTAAACCAGAATGCCAAACA
AGTAATTTTACTGTTTGCCAGAAATTCCAACATGGGAAAGATGTATTTTC
GATTAGTTGCCCATTAGATACTGTTTGTGATTCAGATATCATGTGCAGTG
CAATTATAACAGCACAAATATTCACTTATAATAAATTTGGACAAATGAGC
AAACCAAGCAGGAAATTCTCAAAATCTTTAGCGTTTCTTACGAGTCGTGG
AGAAATAGATTTGAATATTACAGGACAGACTTTAAACACGATgacatttt
ctttccaaagaccAGTCAGCTGTACTGAAGTTCATCAACACTTCCAATAC
AGAATCATATATAAAAATGCTGACAGCGACGATGAGAAATGGACAAATTT
CAAAGGTGAAACTTGCATCTCAAACGATGCCGGCAACAAAGAGTCTACCG
ATTCTGGACATTGCAGTGTCTTACTAAATAGTTTACACATGAACACAATG
TATAACATTTGTTTATCCTATCGAAACATATTTGATATCCAAGAAAGATA
CAGTGCGCTTATTTGCCAGAACTCCAGTACGGCTCAATTACCATGCACTC
CACCTAGATTAACCAAGATTCTACCAATTGAAGACAATGCTGATAACAAT
CACTGGAAAGCTAATCTGTATTGGACTCAAGTGGAGCCAGATTGCTGGAA
CGACAAGTATGACTCAAATTCTACCCACCATTACTATCTAATAGAGCTTT
ACGATGGAAATCAGACTCAAGAGATAGCAGTCCCATCTTTTCAGAACTAT
TCGATAGACATTTTAACTCGTCTTCGATACAAGCATAAATACATGGTCTT
GCTATCAGCTTGTAATGTTTACGGATGCATTAATGGTCCCAAGAGTTATA
TGTATGTACTGAAAGAGAAGGAGGGTGATACTGGTCATCAATCATCTCAA
ACTTTAACAGAAACCGTTTTGATATGTGTTCTCTCACTGTTATTCTTGAC
TGCTAGTAGCTGTCTATATTGGATACTCAAAAAACGTAAACAATTTCAAC
GCTTTCAAACGATGAAACGAAAATTGAAGCCAGAGGATATAAAAGTGGTG
AGACCTGATTGTGAGATGGTTGATCTCACTACAGGGAAGCTTACCCCTCG
AGGTGGAGTGGTAGCTGAGGAGGGAGCTCTCGCCTCTAAGATACATCCTG
ATGATAGACGCATAATAACGGTCGATACTAGACCGTTGCTAAGCCGGAAA
ATCAGTATTGTTAATAGTGGCGTTGTGCCTGCGAACAGCACTTTGGTTTG
ACAGTAGGCTTGATGTTTCACAACATCTTCAAGAGAAAAACAGACTGAAT
AGTAATCTATCAGATTGTCGAAattttttcataatgatattcatattttc
ttagttttgttatttttatagatttttacagtaaattttattattaaaca
aaccattatagtttCAAATCATTATTTAAACCCAATACCAAAATTATAGG
GGACAAATGGGGATTGTATTATCCAAGCCTTGTTGGCTTAGTAATTCATG
CTTTATCTGATGGTATCAGTCTTTTCTGCATATCTGTCTTTTGAAAATCA
TAAATTGTTAACCATATTTCGCGCCTAAAAATTTGACTATAACAAC Coding sequence (CDS) from alignment at sc0000104_pilon:404603..406898+ >MSTRG.13254.1.p1 ID=MSTRG.13254.1.p1|Name=MSTRG.13254.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1872bp|location=Sequence derived from alignment at sc0000104_pilon:404603..406898+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATGTAAATGCATTTTCAATTGCATTGCTGTTACATTATCTCAGTGA
AACCAATGTGGTGGATTGCCAAAGACCATCAGTCAGTTTACTGCTTCATC
CGGATCGAAACTGGTCTTCCATAGGATGTCCTAGCTCAGTAACAAACCAT
GATTCACAAACAGATCATTTCAAAGACAATAATGTTCGATTTATTTGTCG
GTTAGTGGAAAGAGATAAACAGATTGTTGACTATCCATATCATTTCACAT
TGTTTATGATGGTTGATTCGAAATCGATTCTCAATTATGGTTGTCAGACA
ATAGGGCATTGTTTCTCAATAAGTATTACACAACCTGGAACAGATCAAAT
CCAAATTGAGATCAAGACATTTAAAGAATGCTTTACAGGTCGTATACCAT
TTCGTTTTGAATTACGGCAAATAAACACCTTAATAAGCGCTGGCACGCTG
AATGTTATTTTTGCCCGACAAGTTGTGGTACCTTTACGTCTCAATTTCCG
TTTGAACCAATCAATGCCGATTGCTTTGGATGGGAATGTAGATATCCAAT
GCGCGGAAGATTTTAAAACTTCAGTTTACGAGATGGTATATAGCGTTCGT
GGTAAACCAGAATGCCAAACAAGTAATTTTACTGTTTGCCAGAAATTCCA
ACATGGGAAAGATGTATTTTCGATTAGTTGCCCATTAGATACTGTTTGTG
ATTCAGATATCATGTGCAGTGCAATTATAACAGCACAAATATTCACTTAT
AATAAATTTGGACAAATGAGCAAACCAAGCAGGAAATTCTCAAAATCTTT
AGCGTTTCTTACGAGTCGTGGAGAAATAGATTTGAATATTACAGGACAGA
CTTTAAACACGATgacattttctttccaaagaccAGTCAGCTGTACTGAA
GTTCATCAACACTTCCAATACAGAATCATATATAAAAATGCTGACAGCGA
CGATGAGAAATGGACAAATTTCAAAGGTGAAACTTGCATCTCAAACGATG
CCGGCAACAAAGAGTCTACCGATTCTGGACATTGCAGTGTCTTACTAAAT
AGTTTACACATGAACACAATGTATAACATTTGTTTATCCTATCGAAACAT
ATTTGATATCCAAGAAAGATACAGTGCGCTTATTTGCCAGAACTCCAGTA
CGGCTCAATTACCATGCACTCCACCTAGATTAACCAAGATTCTACCAATT
GAAGACAATGCTGATAACAATCACTGGAAAGCTAATCTGTATTGGACTCA
AGTGGAGCCAGATTGCTGGAACGACAAGTATGACTCAAATTCTACCCACC
ATTACTATCTAATAGAGCTTTACGATGGAAATCAGACTCAAGAGATAGCA
GTCCCATCTTTTCAGAACTATTCGATAGACATTTTAACTCGTCTTCGATA
CAAGCATAAATACATGGTCTTGCTATCAGCTTGTAATGTTTACGGATGCA
TTAATGGTCCCAAGAGTTATATGTATGTACTGAAAGAGAAGGAGGGTGAT
ACTGGTCATCAATCATCTCAAACTTTAACAGAAACCGTTTTGATATGTGT
TCTCTCACTGTTATTCTTGACTGCTAGTAGCTGTCTATATTGGATACTCA
AAAAACGTAAACAATTTCAACGCTTTCAAACGATGAAACGAAAATTGAAG
CCAGAGGATATAAAAGTGGTGAGACCTGATTGTGAGATGGTTGATCTCAC
TACAGGGAAGCTTACCCCTCGAGGTGGAGTGGTAGCTGAGGAGGGAGCTC
TCGCCTCTAAGATACATCCTGATGATAGACGCATAATAACGGTCGATACT
AGACCGTTGCTAAGCCGGAAAATCAGTATTGTTAATAGTGGCGTTGTGCC
TGCGAACAGCACTTTGGTTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000104_pilon | genome | sc0000104_pilon:404603..406898 + |
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