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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000104_pilon:393799..396516+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13253.1.p1 ID=MSTRG.13253.1.p1|Name=MSTRG.13253.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2718bp|location=Sequence derived from alignment at sc0000104_pilon:393799..396516+ (Clytia hemisphaerica_ch_hm2_pilon)
aatttatagCTTCTATTAcaaaaaagttattattttttgttgagctatAT
GCTGATGAGGCCACGTAAACATgtaaagatgacgaaaatttctacataag
cacacccctgtctcacagccacggtggaactttttccttcagtggggata
aaaattccaattgaaatcctaatggggatagaaattctattgtacaaagg
ttaaaaaacccagtgaggatggttttggagtgcaatttttaaacatgcaa
tttcgagtggggatgaaatcaaagtcgatttcccagtggggctaaaattc
aagggtattttcccgacaggacaaaatttttgcttaatttttcagtgggg
ctggggtcccagcgggtctgtgacacaggggtgtatttaagtagtcgctt
catttttctgTTCTTTCAGAATTACAATATAAAGCTAAGCAGTATTATAA
CATAAGGCGAAATAGTATTCACGGATCATAATTTAgcgaaaacaacaaaa
actgatcggaaatcaaattttcattggGCAATCGTTAGGCCAGTGGTGGC
AGTTATGGGTGAGCTACGGAGTATCTTGGTGACATTTAGTTGTTTTATAA
TTATCTTAACATTGACACAATATAAAATGATCGAAGACATACTCTCTAAG
AAGAGTAGAGCACAGGATGACAGTGCAACGTCGAATACGAAGAGACTTTT
CTATGATGGTCTGAACACTGGCAAATATCTCAGTCAAATGAGATCAAGCA
CAAATGGTTTAGAACAGAAAAGAAATTGGGAAAGTAGCTTACAGACAGTT
CACCACAATTCGAAGACTTTAGAGAAACTACTTAACCGTATTGGGGAAGA
TTCTCCAGAGCTAGTTAACAAGGGGAGTAATGGGCTGCTGGACCATTTAA
GTACTGTTCTCACTACAACTCACAAAATCCAAGTACAAAGAACAGAGAAA
CATATACAAAGAAAGCTAACCGATGTTCTTAAGAATTCAAAGAAGGCGAG
TACAAAAACATCTGGTTTAGTGAAGGAAGATTTACATATCGTTCAAGACC
AACAGACCCTAAAAAGTACGTCACCCATAGAGGcggaaaataaaccaaaa
actGCTTCATCAGCGAAATTTGAGAATAAGAAGCAtgccaaaaatatttc
aaaacggAAAACGAAGAAACTTATATTCATATCGTTAGGACTTTACAACG
ACCGTAAAGAAGTTATGAGATCTATTCCTTCCGATTATAACATGACTGAA
ATGGATGGCTCTAAGTGTCCGATAAATGAATGCCAAATCACGTACGACCG
GACActtatcaaccaatcagatgcTATTTTCTTTGATGGACGTATAATAC
ACGAGCTTGATatcgaaattttgaaaagactAAGATCGAAATCAGAATCT
CAAATTTGGATCTGGATGATGCATGAGAATCCAAATTTCACTTATTATAA
TATAACACAATATGACCAATTCTTCAACTGGTCAGCTACCTATAGACCTT
CATCTGATATCTACATACCTTATTTTGGAATCCAAAAACTCCCCCCTAGT
CAGTACTTAAAACAGAGAGATGCACAAACTATGGGTCACCACAGTGTGAC
GCCTTTTACGTTTGGGCGTACATTAACGCCTGGGCATAAGGGCggacaaa
aaaaaacaccttCTCTTAAGCACCGACAATTGCCATACTTGAAAAACTTT
GCAGAAGGCAAAGACAAAAAAGTTCTAGTAGTTATTTCACATTGTGACGA
ATACCGTATGCAAATGATCCGGACATTACGCCAATACATACCTGTCGACC
TTTATGGTGGTTGCAAAGATATCATAAATCCGGAGCTAGTGCAGTGTCAC
AGAGACAGCCCTGAATGTGAGGCTCTAATGAAACGATACAAATTTTATCT
GGCGATTGAGAATTTTTACTGCACTGACTACGTGACTGAGAAATATTATC
TAAACGGTTTAATTAGACATATTGTACCCATTGTGCTTAACGGTGGAAAT
TATAGTGACAATGAAAACGTATTTTTACCAAAGTCCTACATCAATATTGA
GAAGTTCGATACATTGAAAAAACTTGGCGAATACTTGAATTATCTTGATA
AAAACGATACTGCTTATAACGAGTATCATCAATGGAGCTATGAGTATTCA
GTTGAACCAAAACATTGCATGTGTAAAGTTTGCAAAGCATTATGGGACCA
TGAAGAAATTgatagaccaatcaaaacactCAAATTATCCGATTTTTGGG
ATGCCGAGAAGTTATGTCAATCTTATGACAGGGAGAAGTTCCAGAAATAT
ATTTATATAAAAAATGAGACGACTCCAAAAGCATAGGGTTGAAAAAAACT
TATATTCATACCAATTTTTTAGATGAAAATATTTATTCCCACCATATTTT
TCCAAACGCTTTGGCTtggaattttttagtatttttcgaATCCGTATATG
GAGCATATGGCagacaattttcttttgttagacTATTATAGACATCGCAC
CAAATTGGTGTTGCGATTTTTGTCATCTCagagaagaagtcattgcattg
ttttttcgcgcgcgttctattttgcgccaatcaaattgcgtcacgcattc
gaaagattcgaaaatgttgcaatcaaaatcaaaacaaaaagttccaTTTG
TGACTTTGTCAGTTTGGCTTTTGAAAAGAACAcattgagcttttcaaaaa
ataaaacctttaattatt Coding sequence (CDS) from alignment at sc0000104_pilon:393799..396516+ >MSTRG.13253.1.p1 ID=MSTRG.13253.1.p1|Name=MSTRG.13253.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1782bp|location=Sequence derived from alignment at sc0000104_pilon:393799..396516+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTGAGCTACGGAGTATCTTGGTGACATTTAGTTGTTTTATAATTAT
CTTAACATTGACACAATATAAAATGATCGAAGACATACTCTCTAAGAAGA
GTAGAGCACAGGATGACAGTGCAACGTCGAATACGAAGAGACTTTTCTAT
GATGGTCTGAACACTGGCAAATATCTCAGTCAAATGAGATCAAGCACAAA
TGGTTTAGAACAGAAAAGAAATTGGGAAAGTAGCTTACAGACAGTTCACC
ACAATTCGAAGACTTTAGAGAAACTACTTAACCGTATTGGGGAAGATTCT
CCAGAGCTAGTTAACAAGGGGAGTAATGGGCTGCTGGACCATTTAAGTAC
TGTTCTCACTACAACTCACAAAATCCAAGTACAAAGAACAGAGAAACATA
TACAAAGAAAGCTAACCGATGTTCTTAAGAATTCAAAGAAGGCGAGTACA
AAAACATCTGGTTTAGTGAAGGAAGATTTACATATCGTTCAAGACCAACA
GACCCTAAAAAGTACGTCACCCATAGAGGcggaaaataaaccaaaaactG
CTTCATCAGCGAAATTTGAGAATAAGAAGCAtgccaaaaatatttcaaaa
cggAAAACGAAGAAACTTATATTCATATCGTTAGGACTTTACAACGACCG
TAAAGAAGTTATGAGATCTATTCCTTCCGATTATAACATGACTGAAATGG
ATGGCTCTAAGTGTCCGATAAATGAATGCCAAATCACGTACGACCGGACA
cttatcaaccaatcagatgcTATTTTCTTTGATGGACGTATAATACACGA
GCTTGATatcgaaattttgaaaagactAAGATCGAAATCAGAATCTCAAA
TTTGGATCTGGATGATGCATGAGAATCCAAATTTCACTTATTATAATATA
ACACAATATGACCAATTCTTCAACTGGTCAGCTACCTATAGACCTTCATC
TGATATCTACATACCTTATTTTGGAATCCAAAAACTCCCCCCTAGTCAGT
ACTTAAAACAGAGAGATGCACAAACTATGGGTCACCACAGTGTGACGCCT
TTTACGTTTGGGCGTACATTAACGCCTGGGCATAAGGGCggacaaaaaaa
aacaccttCTCTTAAGCACCGACAATTGCCATACTTGAAAAACTTTGCAG
AAGGCAAAGACAAAAAAGTTCTAGTAGTTATTTCACATTGTGACGAATAC
CGTATGCAAATGATCCGGACATTACGCCAATACATACCTGTCGACCTTTA
TGGTGGTTGCAAAGATATCATAAATCCGGAGCTAGTGCAGTGTCACAGAG
ACAGCCCTGAATGTGAGGCTCTAATGAAACGATACAAATTTTATCTGGCG
ATTGAGAATTTTTACTGCACTGACTACGTGACTGAGAAATATTATCTAAA
CGGTTTAATTAGACATATTGTACCCATTGTGCTTAACGGTGGAAATTATA
GTGACAATGAAAACGTATTTTTACCAAAGTCCTACATCAATATTGAGAAG
TTCGATACATTGAAAAAACTTGGCGAATACTTGAATTATCTTGATAAAAA
CGATACTGCTTATAACGAGTATCATCAATGGAGCTATGAGTATTCAGTTG
AACCAAAACATTGCATGTGTAAAGTTTGCAAAGCATTATGGGACCATGAA
GAAATTgatagaccaatcaaaacactCAAATTATCCGATTTTTGGGATGC
CGAGAAGTTATGTCAATCTTATGACAGGGAGAAGTTCCAGAAATATATTT
ATATAAAAAATGAGACGACTCCAAAAGCATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000104_pilon | genome | sc0000104_pilon:393799..396516 + |
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