MSTRG.13251.1.p1 (mRNA) -

Overview
NameMSTRG.13251.1.p1
Unique NameMSTRG.13251.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000104_pilon:384306..385678+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.13251.1.p1 ID=MSTRG.13251.1.p1|Name=MSTRG.13251.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1373bp|location=Sequence derived from alignment at sc0000104_pilon:384306..385678+ (Clytia hemisphaerica_ch_hm2_pilon)
agagcagagcgtggtatgcGCAGATTGGATGATCTGTCacaagattaatt
tttttcgaatcaaaactaatatttttattaagTTTTAGGTATACtcaaaa
aaggtttgaaaaCACTGAAGACATAATCATTCACCATGTGTAACCCTCGC
TTCTCATTACTATCCGAAGAAACATTCCTGGTATATGGTATACTGTTTAT
CCTATGTGGTATTGTTGCAGCTGTGGGAAATATAATTGCTTTCTATATCC
TCTGGATGCCTGACCAACGAAACAAATCCAATAAAATTCTCTCATCTTTG
GCCATTTCAGATGCATTGACTGGTCTGGTTGTATTCCCTATAAACGCTTA
CCAAACGTTATCACCAAATGCTCGACTTAGTTGCTCAATAGACTTTGCAA
GAGCTTATTTTGCGTTGCTCATGTCTGGTTCATCAGTCTTAACCCTAGTG
GTAATTGCTCTGGATAGGtacattttaatgaccagataTGCATCATACCA
CTTTATCATGACAGAACGGAAGATAGTTATCATGCTTATAGCGTGTTGGT
TGTACCCTGGGTTGACACCATTACTCAAATATGCCGGCGAAACACCGTAT
CTTATCAATATGATTTTGATATTCTTCGGACCAATCATTCTCCTTATAAT
ATTGTATTGTCTATTGATTCGACTTATTTATGAAAGTAGGAAAAAGGTAA
TCGCGCATGCGTCAAAGACAACCAATATTGTGGAAACTCAAGATGGTAGA
TTAGAAATGGCACCGAGTTCTTCAAATTTAACCGAAGCTGATATAATTGA
CCAACCAACTAAAAGTAAATTGAGTCCAACAGTCTCGGCAGTTTCGGCTA
GCAAAAAATCAAGTAAACGACATATGAAGCTTGCTAAGTCAGTATCAGTG
CTTTTAGGATGCTATTTGATTTGTCTTACACCGTTCAATCTTTGGATGAT
ACTGGATATGGTCAACAAAGCAAGTGGACGTATAAGTTCGGTACACCTAC
AACATTTATACATGTTTGGAGTTTTTGCAGGAGCAGCTAACAGCTGTGTT
AATCCGTTCATTTATTTGTCAAAACAACCGGGTTTTCGGAAACGTTTTCG
GAATATATTGACTCAGATAAGTAATAATGTTCTTTGATTGCGTGCACCTT
TcgaagaaaatcaataaacccGATTTACAGATTGTATTTTAGATTTGCAT
ATTGTACTAGCGAACCGTCAATATAGTGTCTCCGAATACACAGGTTAAAG
TCTGATGACAAATCacgtttttctcgaaatttttatgtgcttgtacatga
catttatttctgattggttcgaattattgacactaataaatttatcagct
gtaagttgtaaagtaAGTaacat

Coding sequence (CDS) from alignment at sc0000104_pilon:384306..385678+

>MSTRG.13251.1.p1 ID=MSTRG.13251.1.p1|Name=MSTRG.13251.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1002bp|location=Sequence derived from alignment at sc0000104_pilon:384306..385678+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGTAACCCTCGCTTCTCATTACTATCCGAAGAAACATTCCTGGTATA
TGGTATACTGTTTATCCTATGTGGTATTGTTGCAGCTGTGGGAAATATAA
TTGCTTTCTATATCCTCTGGATGCCTGACCAACGAAACAAATCCAATAAA
ATTCTCTCATCTTTGGCCATTTCAGATGCATTGACTGGTCTGGTTGTATT
CCCTATAAACGCTTACCAAACGTTATCACCAAATGCTCGACTTAGTTGCT
CAATAGACTTTGCAAGAGCTTATTTTGCGTTGCTCATGTCTGGTTCATCA
GTCTTAACCCTAGTGGTAATTGCTCTGGATAGGtacattttaatgaccag
ataTGCATCATACCACTTTATCATGACAGAACGGAAGATAGTTATCATGC
TTATAGCGTGTTGGTTGTACCCTGGGTTGACACCATTACTCAAATATGCC
GGCGAAACACCGTATCTTATCAATATGATTTTGATATTCTTCGGACCAAT
CATTCTCCTTATAATATTGTATTGTCTATTGATTCGACTTATTTATGAAA
GTAGGAAAAAGGTAATCGCGCATGCGTCAAAGACAACCAATATTGTGGAA
ACTCAAGATGGTAGATTAGAAATGGCACCGAGTTCTTCAAATTTAACCGA
AGCTGATATAATTGACCAACCAACTAAAAGTAAATTGAGTCCAACAGTCT
CGGCAGTTTCGGCTAGCAAAAAATCAAGTAAACGACATATGAAGCTTGCT
AAGTCAGTATCAGTGCTTTTAGGATGCTATTTGATTTGTCTTACACCGTT
CAATCTTTGGATGATACTGGATATGGTCAACAAAGCAAGTGGACGTATAA
GTTCGGTACACCTACAACATTTATACATGTTTGGAGTTTTTGCAGGAGCA
GCTAACAGCTGTGTTAATCCGTTCATTTATTTGTCAAAACAACCGGGTTT
TCGGAAACGTTTTCGGAATATATTGACTCAGATAAGTAATAATGTTCTTT
GA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.13251MSTRG.13251Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13251.1.p1.exon1MSTRG.13251.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13251.1.p1MSTRG.13251.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000104_pilongenomesc0000104_pilon:384306..385678 +