MSTRG.13213.1.p1 (mRNA) -

Overview
NameMSTRG.13213.1.p1
Unique NameMSTRG.13213.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000103_pilon:1035437..1036792+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.13213.1.p1 ID=MSTRG.13213.1.p1|Name=MSTRG.13213.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1356bp|location=Sequence derived from alignment at sc0000103_pilon:1035437..1036792+ (Clytia hemisphaerica_ch_hm2_pilon)
TCGCCACTGATAAAACGCTTTATAAATGAGAGAAAAATCTACCAGACAGT
GTTTTGAGTGTTCCTTGGAAGATAGAGGGTAGCGAAAGAATTTATTCACc
gaaacaaaaaaagtaaactTGTTGTTATCATCGGTTACATTTATTCACAG
GTAAGAGATATAGAATCTATTTTGTAACATATTGTCCAGAATTTCATATA
ATATTAGCCATGtataggcaaaaataaaataatgtagTTTTTCCGGAATg
cggataaaagaaaaaagcttCATGCTCTCATCattgaaaaataactttta
taaacaaacagtatgaagtaagccctggaaaatcttttttttttcacccg
gtcggtttacattacatttttttattttcgccatattattacaaaatttt
tATTCTGCTAAGATTTCTTCCCTTCCTTGGTATACTAAAACAAAACACCA
TAATtaaattaaatatttatttcaatacccctatgtcacagacccgctgg
taCCCCAGCCCcgcccactggaaaatttggcaaaaatttcttccccggtg
ggaaaataccctgttacttcagccccactgggggtttgacttttatttca
tccctaTTGGAGatccaatgtttaaaaattgcactccaaaatcatcACTG
GATCTTTTAACCTTggaataataaaatttctatctccattgacatttcaa
taggaatttttttccccactgaggaaaaagtttcaccggggctgtgagac
agggatttATTTCGATTAAAAAAGTAATACTGATTAGTACTGTACTTTTG
ATTTATCCCATAAAAACCTCGTTCGTCGATGATTCCTGGATGTTGTTGTT
TTAGGAAAATGGCATTGTTGACAGGTGGGGCTGGAATGGCACTTGAAGCG
GTTGGCCCAGTTGTAGAATCAGGCGGGATCGTTGGTGGTGCTGTTGGCGG
GTTGGTAGGTGGTGCTGTAGGCGGGTGCGTCGGCTTGgctacaaaaaata
aagaagtcgGGCAATTCACTGGAGGTGTAGTTGGCGGTGCTGCTGGCGCC
GTCGCTGGAGGGTTTACCGGAAATTGTTTGGTACCAGGTGGACCTGGTGC
CTTGGTTGGCGGTGCCTCTGGATGTCTTGCTGGAGCCGGTGGCGGCTATG
TAGCCTCTGGAATATTATATGATACTTTCAAATGATGATAAATAAGAGAC
AAATACAATTTTGAAAAGTAGCATGCATATTTAGACAGCAGTATCATTTT
TTATACtttcattttagattttgttGGCGATTATACAATGTTTGTAACTT
AGTTATTCAAAGTTCTTAAAGATGaagttgtttgaaaaaaaatccttaaa
gaACCT

Coding sequence (CDS) from alignment at sc0000103_pilon:1035437..1036792+

>MSTRG.13213.1.p1 ID=MSTRG.13213.1.p1|Name=MSTRG.13213.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=327bp|location=Sequence derived from alignment at sc0000103_pilon:1035437..1036792+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCATTGTTGACAGGTGGGGCTGGAATGGCACTTGAAGCGGTTGGCCC
AGTTGTAGAATCAGGCGGGATCGTTGGTGGTGCTGTTGGCGGGTTGGTAG
GTGGTGCTGTAGGCGGGTGCGTCGGCTTGgctacaaaaaataaagaagtc
gGGCAATTCACTGGAGGTGTAGTTGGCGGTGCTGCTGGCGCCGTCGCTGG
AGGGTTTACCGGAAATTGTTTGGTACCAGGTGGACCTGGTGCCTTGGTTG
GCGGTGCCTCTGGATGTCTTGCTGGAGCCGGTGGCGGCTATGTAGCCTCT
GGAATATTATATGATACTTTCAAATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.13213MSTRG.13213Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13213.1.p1MSTRG.13213.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13213.1.p1.exon1MSTRG.13213.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13213.1.p1.exon2MSTRG.13213.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000103_pilongenomesc0000103_pilon:1035437..1036792 +