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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000103_pilon:937956..942550- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13210.1.p1 ID=MSTRG.13210.1.p1|Name=MSTRG.13210.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4595bp|location=Sequence derived from alignment at sc0000103_pilon:937956..942550- (Clytia hemisphaerica_ch_hm2_pilon)
CCACGTAGGGTCCATTTTTCGAACCTCGGCGGAGCACCCCCGTCGGTCGA
CAAGGGTAGTACCCCCCCCGGGATTACTGCAATGCTGAAATAACAATAAC
ATTGCATGAAACTTGGCGTGAGGTGAATAAAGAAAACCGAAAGAATTTAG
CCAACTTAAATGTTCCTGTTGCCACAATACCATCTACAGGTCGAGGTTAT
CATCACAAGAATGGAGATAAACAAGTAGGTCAAATACCACCTAAAGCCAC
AATCGCAGTTAATTCGAAAGTTATATTGACAAAAAACCAAAAAGCGTTTA
CCCCCTATGGCTTACATAATGGTGCTGTTGGTATTGTGAAAGCAATTTTA
TATGAAAAAGGCACATCACCTCCACAATTACCTACAGCAGTTATTGTTTA
CTTCCCGAGGTATACTGGACCAGCTTGGGATATTAACAATCCCAAATTTA
TCCCGATTACTGCAGTCCGCTCAAAATGTGAAAGTGAATGCTGTAGTCGA
ACTGGTTTACCATTGATGCCTGGTTATTCCCTCCCAATAGCTAAGGCCCA
AGGTATCACTGTTGGAAGCAATCAACCTGCTGAATTCATGAGGGTGAGTA
TACAAGAAGGTAAGTACATGGAACAGCAAAGTTTGGGAATAACCTATACT
GCTTTATCAAGAGCTGAAAGTGAGGATCGATGGTGTCTAATTGATAAAAT
ACCACAAGACCGGCTTCATTACATCAACAACCATCCACAAATGCAGAATC
GCCATCAAGAAGAAAAGCGACTAAATGAACTATCTGCTAATACTATTGCC
AGGTACTCGCATCTTTTAAATAAATCAAAGTATCTTCAGCTGCTAAATGA
ATTTGATGTACTTTGCAACGATGGTATCATAACCAGTGTATGTACCAGTG
GAAATGCAGCTTGTACCTGTGTATATTGTTCTTTGAAATAATTTGTCAAC
CGTATTGAAAGCAAAGATGGACCGATTCAAAATACTTTGGGCGTACAAAT
TTAGCGAACAGAAACTTTGCTTTGGCAAGGTCAAATAAATGTAAAATCTA
CGCCATTTTACTTTCGTGAATCCTTTCGTTAAAACGAGACTTCTCAAAGG
AAATCGAGTTAGTAGCAATTATTCCTTGAATTGGATACAACAATATTTTT
AACTACAAATATTATTTGAATTTGAATTAAAATTTATTTTTATCTTTAAC
AATTACATGCATAAGCCACAAAAGTTTCTGTTCGCAAAAGTTTGTACGCC
TTAAGGATGCAATTTTAATGCACAATAGTTGAATGTTCCTAGTACTTGAC
ATTCCTAGTATTTCTTTTTAGCTATGTTATCAAAACAACCTAATGTAAAT
GAAATTTGGTTTTCAGATTTCATATCATCCTCCCTGCATAAATAAGCTAA
CATTTTGAGATAAACTTTTTTACCCCCACTTTAACTCCTACTTTTATAAA
CCGTTTCGACTTTGGACCTTTGGAATTAATATATAATGAATGTCAAGACC
TAGTGTACATTTCAATTTTTGTAGTAAGTCATTAGCTATTAAAATTCTTT
CGCTTTAAGTGTGCACTAATCTTTGTTTTGCTTGCCATTTATCGACCGTT
ACTAGAACACTATATTTTCTAAGAAAAATAATTCGAAGCCACCTGATTTC
AGAGGTACAATTATTTTGGCATTGCTGAAATCAAAAGGCTTTACAGTATC
TTTGTACCAAAAATTAGGTTTTTAGCACTTAATGGCAAGAAAACTAAGAT
TAGTGCTCACATAAGGGAAAGGACTATAGTAATAAACAAAGTAGCAATCC
AAAATTGGACATGACTTTATGGCTTATTGAAACGAATATTGGTAGAAAAG
ATCGCAATAAGACGATAAATTTAAATTATCTGGCCACTTATATCGCAATA
AGACGATACTTATCAAATTACAGCTAGCTGGAGTCGGGACGGATGGCAGA
CTATATCGCAATAAGACGATAGATATAAAAGTATATGTTGGCATACTATA
CATCGCAATAAGACGATACGTATTAAAAATAAACTGCCAGCTAGCCGGAG
TTGGGCATCACCAAATGCTAAAGTCTGAACAAGGGTGGTAGGGAGGCAGA
CTATAAATCGCAATAAGACGATTGATTTTAAATTATCTGTATGTTGGCAG
ACCATACATCGCAATAAGACGATACATATTAAAAGTGACAGCTAGACGGA
TTCGGACATCAAATTTTGGATACCATCCCTCTATTTGACTTCAGGTTTAA
AAAAGTAGTTGTAAGAAGTAAGAAACGGTAACTCTTAGTTATTACATGTT
TTACTTTTTTCGGTATATCCTTCAATTTTCTCGCAAAATAAAAAACAAAT
GCAATAAATGTCACTGGTTTAAGGTCGTTGCAGTTTCTAATCTTTCTTTG
AACCCATTTTCCTTTGAGATTATATATCACGTTTTAAAAGTTAGCCTGAT
TTCTGCTTTGTTTTTTCTGATTCAATTAGATTCAATATGATGGCCGGAGA
AAATCGAAACTGTTTCATCGACAACCAACGATTGCACCCAAGAATTATGA
AATAGGTAATCCCTTGATATTGTTTGTAATCTTTTCTACAGTTCCTTACC
CTGATGTTTCATATCTTCAAAACTATTCAGTTTAAAAATCTATTTTTTTT
CATTATTCAGGTGATTAGTATCGGAGAATTTAAAAGACAAGACAAGTATA
TGTAGTGCAGTTTATAAGCATATCAATTTATTAGCTAAGAATAGTTTGAT
TTGATTTTTTCTAATAAAATTTTACCTGATATGTATTACTTGTTATCTTT
GATATTCCCGGGAAATAGATATTTATCATATCTTTCAAACATCAATGTTT
CATTGAGTTTTCTGTTTCTTACTATTTAAAAAAACTGATTTATTATTGAA
ACCATTATTTTTAATATTTAATATTATTACTTTTTTTAACTGTTCCGAAA
ATGTCGAAAGATTTACTTGATTTAAAGAGTAAATTACGCTGGCGGATAAA
ATATAGGCCAATATATCTAATCCTAATATAATGCTAAAACTCAGCATATG
TGTTATTGGAGCTGATTTGAGTAGACGTTGGACGTGTAGGAAGTTAGAAG
CAACTTACAAATTCAGTACCAGCTTTATAATAAAAGAAGTTCTGTTTTCT
TTTCTTTTTTCAGATCTAATATATTTGTATATAACAAACAGTAAAAGATG
TCAACGTCACAGGTTACCGACTCTCAGATGCTGTCTCTCATGTCGCAGTT
GCAGACAATAATCAACGGTGGTAAATAATATTCTATATTCGGTTGATTTG
TCAGTAATATTCATATATAGGTGCTGCCACCCAAATCTCCTGGGTGAATA
TAGTTGGACAGAAATTCTTATTTGTTCACATATATATCAAAGGTTGTGTT
TGATGCTAACAGTTCATGAATTTTTATTAAGGTTTTCGAACTTCTTAATA
TCCCCTACTGATATTGAATTATTCCCTTGACGTTTTCATTCTACTTATTG
TCCCCCCTTCTCACCAATATCGTTTGACATATTACTCAAACCCAACAATG
CATTGATAATACAAAAATTACCCAGAGGGATCATCAGCTTTTCGGCTAAA
AGTCTGTTACTGAAAATGATTCCTTTTTATATTCTTTAGCTGCCGAACAG
TTAAACATGCTGCAGAGCAGGATCTCTGGATTTGGTAGGTATATTTACTT
TGATAAGTGAGGAAGACTTTTAGATTACCCAACACATGTGAAAAAAAAAC
AGAAATTGTAAGTTTTTTAATCTTTTTTCAGATGGGACTGGAAAATCACT
GGATTCAATTCCACCGGGCGTTCCTGTCAGTCAAATCAGTAAGTAAATCT
CTTACCTTTAAATTTGAAAATACAATTATGTAAGTGTGATTTGAAAATGT
TTTTGATAAATTACCCAAAACCAATTTTATCAATCCTGTTATCGAATTTA
TGACTGCACTTAATCTTTATCTTTAACCCTTTATCTGATCATACAGGTCA
CAAACGATTTGTTTATTTTGGTTGTTTTTAAGACATATTACTTATGTTTC
TTTCATTGTTTCATAAATTACCCCTTTAAATTTGTCTTTTCAGCTTTCGC
TCGACAACTATTCGTCCACCGGGCACAATCCGTGGCCAACGCCGACACCA
GCGATGCCGGCCTTGGCTATTGGGTCAACGCCGATGGGATGTTGCCCCCA
CGTCCAAAACCCGAAAGACGGTTTTACAACAACGATCGTGGGCGTGGGCG
TGGCAGTCGTGGTGATGGGCGTGGTGGAGCTGGGAGAGGTGGTGGTAGAG
TTGGGCGTGAGCGGACCAGGTCAAAGTCACGAAATCGTTCGCGCTCAAGC
TCCCGATCAAGGTCACGGTCCAGGTCCAGGTCACGTGGTCCGTGCTCGGA
GTGTCAGCGTCGTAGGCGCCAATGTTATCATAGAAAGTGATAATATCTAT
TTCTAGCCAGTTATGAAATATTTTAAGACTTCAAAAGAAAAAAACCGTAT
TTTTACTTTGTTGCGTTGCTGAAGAAATAGATATGTTACTTTTTATGATA
GCATTTCATTTTAGTAGTTTATCTACATCAATTAGTACTAATCGT Coding sequence (CDS) from alignment at sc0000103_pilon:937956..942550- >MSTRG.13210.1.p1 ID=MSTRG.13210.1.p1|Name=MSTRG.13210.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2088bp|location=Sequence derived from alignment at sc0000103_pilon:937956..942550- (Clytia hemisphaerica_ch_hm2_pilon)
CTTTCGCTCGACAACTATTCGTCCACCGGGCACAATCCGTGGCCAACGCC
GACACCAGCGATGCCGGCCTTGGCTATTGGGTCAACGCCGATGGGATGTT
GCCCCCACGTCCAAAACCCGAAAGACGGTTTTACAACAACGATCGTGGGC
GTGGGCGTGGCAGTCGTGGTGATGGGCGTGGTGGAGCTGGGAGAGGTGGT
GGTAGAGTTGGGCGTGAGCGGACCAGGTCAAAGTCACGAAATCGTTCGCG
CTCAAGCTCCCGATCAAGGTCACGGTCCAGGTCCAGGTCACGTGGTCCGT
GCTCGGAGTGTCAGCGTCGTAGGCGCCAATGTTATCATAGAAAGTGAATG
GGACTGGAAAATCACTGGATTCAATTCCACCGGGCGTTCCTGTCAGTCAA
ATCACTGCCGAACAGTTAAACATGCTGCAGAGCAGGATCTCTGGATTTGA
TGTCAACGTCACAGGTTACCGACTCTCAGATGCTGTCTCTCATGTCGCAG
TTGCAGACAATAATCAACGGTGCTTTCGCTCGACAACTATTCGTCCACCG
GGCACAATCCGTGGCCAACGCCGACACCAGCGATGCCGGCCTTGGCTATT
GGGTCAACGCCGATGGGATGTTGCCCCCACGTCCAAAACCCGAAAGACGG
TTTTACAACAACGATCGTGGGCGTGGGCGTGGCAGTCGTGGTGATGGGCG
TGGTGGAGCTGGGAGAGGTGGTGGTAGAGTTGGGCGTGAGCGGACCAGGT
CAAAGTCACGAAATCGTTCGCGCTCAAGCTCCCGATCAAGGTCACGGTCC
AGGTCCAGGTCACGTGGTCCGTGCTCGGAGTGTCAGCGTCGTAGGCGCCA
ATGTTATCATAGAAAGTGAATGGGACTGGAAAATCACTGGATTCAATTCC
ACCGGGCGTTCCTGTCAGTCAAATCACTGCCGAACAGTTAAACATGCTGC
AGAGCAGGATCTCTGGATTTGATGTCAACGTCACAGGTTACCGACTCTCA
GATGCTGTCTCTCATGTCGCAGTTGCAGACAATAATCAACGGTGCTTTCG
CTCGACAACTATTCGTCCACCGGGCACAATCCGTGGCCAACGCCGACACC
AGCGATGCCGGCCTTGGCTATTGGGTCAACGCCGATGGGATGTTGCCCCC
ACGTCCAAAACCCGAAAGACGGTTTTACAACAACGATCGTGGGCGTGGGC
GTGGCAGTCGTGGTGATGGGCGTGGTGGAGCTGGGAGAGGTGGTGGTAGA
GTTGGGCGTGAGCGGACCAGGTCAAAGTCACGAAATCGTTCGCGCTCAAG
CTCCCGATCAAGGTCACGGTCCAGGTCCAGGTCACGTGGTCCGTGCTCGG
AGTGTCAGCGTCGTAGGCGCCAATGTTATCATAGAAAGTGAATGGGACTG
GAAAATCACTGGATTCAATTCCACCGGGCGTTCCTGTCAGTCAAATCACT
GCCGAACAGTTAAACATGCTGCAGAGCAGGATCTCTGGATTTGATGTCAA
CGTCACAGGTTACCGACTCTCAGATGCTGTCTCTCATGTCGCAGTTGCAG
ACAATAATCAACGGTGCTTTCGCTCGACAACTATTCGTCCACCGGGCACA
ATCCGTGGCCAACGCCGACACCAGCGATGCCGGCCTTGGCTATTGGGTCA
ACGCCGATGGGATGTTGCCCCCACGTCCAAAACCCGAAAGACGGTTTTAC
AACAACGATCGTGGGCGTGGGCGTGGCAGTCGTGGTGATGGGCGTGGTGG
AGCTGGGAGAGGTGGTGGTAGAGTTGGGCGTGAGCGGACCAGGTCAAAGT
CACGAAATCGTTCGCGCTCAAGCTCCCGATCAAGGTCACGGTCCAGGTCC
AGGTCACGTGGTCCGTGCTCGGAGTGTCAGCGTCGTAGGCGCCAATGTTA
TCATAGAAAGTGAATGGGACTGGAAAATCACTGGATTCAATTCCACCGGG
CGTTCCTGTCAGTCAAATCACTGCCGAACAGTTAAACATGCTGCAGAGCA
GGATCTCTGGATTTGATGTCAACGTCACAGGTTACCGACTCTCAGATGCT
GTCTCTCATGTCGCAGTTGCAGACAATAATCAACGGTG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000103_pilon | genome | sc0000103_pilon:937956..942550 - |
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