|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000103_pilon:790187..794384- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13196.2.p1 ID=MSTRG.13196.2.p1|Name=MSTRG.13196.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4198bp|location=Sequence derived from alignment at sc0000103_pilon:790187..794384- (Clytia hemisphaerica_ch_hm2_pilon)
TAGAAAAAAACGCAAAGAGATTTTTTGGTCGTATTTTGTACTTCAAAGGT
AAAGAGAATTTAAATTTAAATTTCTTCTTTTATTGTCTATGTTCACTAAC
GATTTTTTTGCGTTTACTAAAAAGTTGACTTGGGTATAAATTATTGATCA
CCAAATCTTTAAGTATTCGCTTGTTTTTTTTGTCAACCTTAGATCTCAAT
TTTTCAAGTATCTTCTCTCGAGCAAGCTTGACTTAAGTTAGAAATTTTAC
TGTCAGGCAAAAAGCTTATTTTATGGAATTTGTCATATAAAAGAGAAAAA
TTTTGCGGTCATCTCAAATTTAACTTGACGAAAGTTTTGTGATAGAAAAA
AAGTGATTTCTTTTTTTAAATTAGATTTAAAACCCCTTCTGGTTTTCAGT
TTAAAGGTAAATTGATATCGACAATAAGTTTATGCACCAAGATACCGAAT
TTCAACAGTGTGTAGGCTATTGAAAGAATTTTTAATGCAGGCTATTGTGA
GGTCAGGCTACATATTAATGATATGTTTGGCTTTGGTTTAATTTTGAAAG
GAGGCAACCATTGAGTTTATTGGTTAATTATCGCTTAATTTGCCGTTACA
GTCGCACAATATATTTTCAATTGTTCTTTAGAAATTTTACGGTTATAAAC
AAGGTATTTCGATGTTTAAATTTGAATTGGTTTTTCTCAAGCTCCGAGAT
GTGACAACGTTAGAACGGAGTAATACGAACAAAGTCTCTGAGATATGAAA
AACTATATTTTCGCGGTTTTGAATAGAATTACAGTTTTCTATAGAGCAAG
TTAAGTCAATTGATACTTTTTATGAATTCAGATTTTAGTTGAATTGAATG
TAGTTCATATTTCAGCATATTGTATTCTCGTTTCGCGAAAATAATATCCT
CTAAAAAGCCACAGAGATTTTAACTGTAATGGAATTTAACTATCTTTTGT
TGAAAAAGCGTAAAAAAACGCGAATATAATAAAGTCTTTGTTATAAAGAT
TCTTTGTCTTTATGCTAAAACAATCCAATAACGATTTGTTAACTTTTTTG
TACTATTACAGAAAAAGAAAGAAATTGTCGAAAAATTTCGTGGTTTTTTT
TTGTTATGATGAAGGAGCGTTAGCAGTAATCTGCTGTGGAAACTTCTTTT
TTCAATCTTTGCTAATTTGTTAAAAATTGAACGTAAAAGAGGGAATGAAC
AAAGAATTGTTATTTTTTTCGCTGTATTTTATTTTTTTGATATTATCACT
TATCTGGTTTTCACAAAACTAAAAAGAAATGGGGTCGCTAAAATAAGTTG
AACTAAACTCGAACACAAGAAATGAATTTTTATTTAGTTTTTTACGTTTA
TCTTCAAGTAAAAACCACAATCGCAAAATAAGAGAAATTTTCTCGATTAG
AAAAAAAAACTGATGGTTGTTGGTCCTCTTGATTCTGATTATATTTGAGG
ATGGGAAATAAGTTTTTCTAAAAGACCAAAAAAGAGGGAGTTTTTACTAA
AATTATTTCGCTAATTTCCTTTTGGTTTATAGGGTTGATTAGATCGTTTA
ATGAAGTGGGATGTGATTAAAATGGTCTTGAAATGACCGTCATGACGGTT
TTATTCAATTTTATGTGTGGCCTTGGTTGAGGGTGACACTTTCTTCAGAT
ATTCATGCCTGCTGCCAAAAGATGTGGAGATTTTGAACGCAATTCTACTT
TTCTGACGTAATTCTCTTTTTTTCTCGTTCACAGCAAAAGAAAACAACAA
ATTACGACAATAACACAACACGCACCAACTTATGACAACAAAGCACAATG
TCGGCAGCAACCATTGCATTAAGTGCATTACCATCCATGTTGAATGGTGA
TTTATCGACTCCGTCACCACCACAAATCGCCGTCATTGACGATCATTACA
TTGATTCTGACGAAGTTGAAGAGAACCAATCAACGAATCATATCGACAAC
ATTGAAGACGCAGACCAAACGTCACGTGATTCTCCATCTCTGGTCGAGCG
ACCTTCCATGTTATCCGATCGACCTTCGATGCTATCGAAACCGACATTTG
TAGCACGACCAAGCATGTTAGGAGAAGGAGCAGAAGATTTATCCCGTGAT
ATGGACGATGATGACTCCAGTTCACATGATGGAACCTCAAACAACAACAC
CGTTAAAATCCCACACAAACGTGGCAAACGAAAGAAATATCAAAAGTACA
CGCCTGAAGACCGAATAGCTATCGGCAAATACTGTTTTGAGCACGGACCA
GCTGCTGCACGTAAAGCCTTTCAAGGTCGCTACCCAGAGATGAGTGAAAG
TGTGACAAGAGGTTTTCGTGATAAATACAAGCAGATGATCGGGGAATCAG
CTGTCTATGAGTTCGAGCAAAGGAGACAGAAAGAACTACAGAACAGTTAC
ACAGCTCCTCCTCGTGGTCGCCCACGCAAGTACAAAGTCACCGATGAAAC
CAATAAACCATACAATGGACAGATATCACCTCCGCTCAATACACAAGTTG
TAAAGGACGAATATGCACGGTATCATCAACGAAATGGCGAACGCCCGGCA
TTCCCATTAGAAAGCACCCACAGACGCCCGGCCTTTCATGAAATTGAAAA
GGATCACCCACGATTCATGAAGATGACATTAGAAGATCAATTAAGAATCG
GTCGATATTGCTCGCATCATGGCGTCATGAAAGCATTGCAAGAGTTCCAT
AAAGAATACCCTGGGATCAGCGAATCGATCATTTTCGATTTCCACAAACA
ATATCAACGCCACAAACAGGAGCAAGACCTTCAACAGAGACGCGCAGGAT
ATCGATCACCACCCAACACGCATGTGCATGATTATCCTACGCAACCACAA
GTGTTTGTCTTAGAAGGTGATCAAATGACAGGACCAGGTTCGACAGGTTC
CGCCAAAACGAATGGCATGGTTTCACCACGTGGCGATGAAGAGCGAACAT
CTAATCACAGTTCGCCTTCTGTTTCACCAAAACAACATCATCCACCAGAA
GAAAGAAGACTTTCTCCTCCTTATGCACGTTCACCACGAAGTGAAAGTGA
GTCTCCACCTTACAGACCATTCGAACATCCACCTCATCAAAAAGAAGAAG
GTGTTGAACGTCATCGCTCACGCTCGCCACCCGTGCCCCGCCATCGATCT
CGATCTCCGCCTCACAATAGATCACCATCAATGCGCTCTTCTCCGAGCAT
TCCACATAACGCAAATTCCGCCATTACATCACATCCATCCGTAATTGCAC
CACCTATCATACACTATCCAAGACCGCGGCCACACTCACCTAGACATCAT
TCACCACCGCCGACTTTCAACGGTCACCTCCATCGCTCGATTAGCGAAAA
CGCCCGACTCCGTGAATATGACGTAATACCACCACGCATAAATGGTTACG
CGGCTGTAGAGTATCCTTATGATCGCAAAGATTTGATTGGGAAACCGATT
GGCAGTATAAACCCACAAAGTGGGCGAAGCAAACGATTCAAATACCAAAA
ATATACACCCGAAGATCGGTATAATATCGGGAAACTTTGCAACGATATCG
GATTAGGTGCTACAGTGAAAGTATACAGAGAACAATTTCCACGCTTGAAC
GAAAGCGTTGTACGCACGTTTCGTAATAAATATAGAGAACTTTTAGAGAA
GGGAGGAGGTATCCCAGCTACCGAGACCATCGAGCGCAAGCCAAGCCGTC
GATCAATATCAACTTTAATTGAAGGTGAAGTTGTCTCACAACTTAAACAA
TTTCATTCTTCACAAATTGAACTAAGTGAGAATTTTGTGATTGCTGTTGC
AGAAAATATCATGGCAACCAAACACCATAAAGAGGCTGAAAACATTAAAG
GAATTATTACTAAAGAATGGGCAAACTCGTTGCTGTGGAAACATAAATTG
TTAGACAAACCATCTGGTAATGTACAAGGGGTATGTTGTGAACGATGCAA
AACTATTTTGGTATGTCCGAAATGTCCAAATTAAAACTTTAACTGTCCAA
AATATAAAATTTAGTTTTAGTTTCTCATAGTTATATGATAAATAGATGTT
TTTTTTATTTTTATAGAGTTTTATTCTATATTAGCAATTTTTCAACTCAA
AAGAATTGAAACTTTGCGACAGGGATAGATCAACTAGGTTTGAATTGAAC
TTTTTAGTGTTTGGTAAATACCGTTCCATAAAGAAGTATTTAGACGAA Coding sequence (CDS) from alignment at sc0000103_pilon:790187..794384- >MSTRG.13196.2.p1 ID=MSTRG.13196.2.p1|Name=MSTRG.13196.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2187bp|location=Sequence derived from alignment at sc0000103_pilon:790187..794384- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCGGCAGCAACCATTGCATTAAGTGCATTACCATCCATGTTGAATGG
TGATTTATCGACTCCGTCACCACCACAAATCGCCGTCATTGACGATCATT
ACATTGATTCTGACGAAGTTGAAGAGAACCAATCAACGAATCATATCGAC
AACATTGAAGACGCAGACCAAACGTCACGTGATTCTCCATCTCTGGTCGA
GCGACCTTCCATGTTATCCGATCGACCTTCGATGCTATCGAAACCGACAT
TTGTAGCACGACCAAGCATGTTAGGAGAAGGAGCAGAAGATTTATCCCGT
GATATGGACGATGATGACTCCAGTTCACATGATGGAACCTCAAACAACAA
CACCGTTAAAATCCCACACAAACGTGGCAAACGAAAGAAATATCAAAAGT
ACACGCCTGAAGACCGAATAGCTATCGGCAAATACTGTTTTGAGCACGGA
CCAGCTGCTGCACGTAAAGCCTTTCAAGGTCGCTACCCAGAGATGAGTGA
AAGTGTGACAAGAGGTTTTCGTGATAAATACAAGCAGATGATCGGGGAAT
CAGCTGTCTATGAGTTCGAGCAAAGGAGACAGAAAGAACTACAGAACAGT
TACACAGCTCCTCCTCGTGGTCGCCCACGCAAGTACAAAGTCACCGATGA
AACCAATAAACCATACAATGGACAGATATCACCTCCGCTCAATACACAAG
TTGTAAAGGACGAATATGCACGGTATCATCAACGAAATGGCGAACGCCCG
GCATTCCCATTAGAAAGCACCCACAGACGCCCGGCCTTTCATGAAATTGA
AAAGGATCACCCACGATTCATGAAGATGACATTAGAAGATCAATTAAGAA
TCGGTCGATATTGCTCGCATCATGGCGTCATGAAAGCATTGCAAGAGTTC
CATAAAGAATACCCTGGGATCAGCGAATCGATCATTTTCGATTTCCACAA
ACAATATCAACGCCACAAACAGGAGCAAGACCTTCAACAGAGACGCGCAG
GATATCGATCACCACCCAACACGCATGTGCATGATTATCCTACGCAACCA
CAAGTGTTTGTCTTAGAAGGTGATCAAATGACAGGACCAGGTTCGACAGG
TTCCGCCAAAACGAATGGCATGGTTTCACCACGTGGCGATGAAGAGCGAA
CATCTAATCACAGTTCGCCTTCTGTTTCACCAAAACAACATCATCCACCA
GAAGAAAGAAGACTTTCTCCTCCTTATGCACGTTCACCACGAAGTGAAAG
TGAGTCTCCACCTTACAGACCATTCGAACATCCACCTCATCAAAAAGAAG
AAGGTGTTGAACGTCATCGCTCACGCTCGCCACCCGTGCCCCGCCATCGA
TCTCGATCTCCGCCTCACAATAGATCACCATCAATGCGCTCTTCTCCGAG
CATTCCACATAACGCAAATTCCGCCATTACATCACATCCATCCGTAATTG
CACCACCTATCATACACTATCCAAGACCGCGGCCACACTCACCTAGACAT
CATTCACCACCGCCGACTTTCAACGGTCACCTCCATCGCTCGATTAGCGA
AAACGCCCGACTCCGTGAATATGACGTAATACCACCACGCATAAATGGTT
ACGCGGCTGTAGAGTATCCTTATGATCGCAAAGATTTGATTGGGAAACCG
ATTGGCAGTATAAACCCACAAAGTGGGCGAAGCAAACGATTCAAATACCA
AAAATATACACCCGAAGATCGGTATAATATCGGGAAACTTTGCAACGATA
TCGGATTAGGTGCTACAGTGAAAGTATACAGAGAACAATTTCCACGCTTG
AACGAAAGCGTTGTACGCACGTTTCGTAATAAATATAGAGAACTTTTAGA
GAAGGGAGGAGGTATCCCAGCTACCGAGACCATCGAGCGCAAGCCAAGCC
GTCGATCAATATCAACTTTAATTGAAGGTGAAGTTGTCTCACAACTTAAA
CAATTTCATTCTTCACAAATTGAACTAAGTGAGAATTTTGTGATTGCTGT
TGCAGAAAATATCATGGCAACCAAACACCATAAAGAGGCTGAAAACATTA
AAGGAATTATTACTAAAGAATGGGCAAACTCGTTGCTGTGGAAACATAAA
TTGTTAGACAAACCATCTGGTAATGTACAAGGGGTATGTTGTGAACGATG
CAAAACTATTTTGGTATGTCCGAAATGTCCAAATTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000103_pilon | genome | sc0000103_pilon:790187..794384 - |
|
