MSTRG.13177.1.p1 (mRNA) -

Overview
NameMSTRG.13177.1.p1
Unique NameMSTRG.13177.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000103_pilon:459185..460142-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.13177.1.p1 ID=MSTRG.13177.1.p1|Name=MSTRG.13177.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=958bp|location=Sequence derived from alignment at sc0000103_pilon:459185..460142- (Clytia hemisphaerica_ch_hm2_pilon)
ATCAAGCCAATGACATGAATGATTCTGAAGGTAACTTTAGTAGGAACTTG CGATATTTGAATAAAATAAGACCCCTCTGATTTGTTTTGGTGTAATTTGG ATGTTTAACAAACCTTTTACATTGTGTAGCTTGCCAGTACAATAAATTTG TTCAATAAATGAGAATTTGTAATTTCAAGAACGAAAACAACTTAATGATG TAATGATTTTAATGGAAAATTGAAGATTGACTTGACTTGAATTAAATAAA TATTTTCTCAGACTTTGAAATCATCCAAACCAATGTGGACCAACAGCAAA ATACAGAATTCAAACCACCCAAACAGTACCAGCCATCATATCAACATAAT TCCCAATTCAAATTTCAACCAAGCCAAGAATCAACACAAATTAAACCACC ACCACCACCACAACAATTCCAACAGCCACAAGTAGCTAAACAAAAAACTG TCCTGGACCAAGCAACTCCACCTTTCCGAAATCACCAAGAATACACCGAA GCCCAGAGTAAGACGTTATTATAATTTATTCATATACATATTGCTTCTTT CAAAATTACTAACCAATTCTTGTATTAAAAAGAAAATTTTGAAGATTAAA AATTTATTAGCGTTTATTATTTTATTAGCATACATGGTCTTTTATTCATT CCTTCAATTTTTCAACATGACCTGACATCACATCAATATTTTAATTTTAG GGAACATGGATCTTGCTCCAGCTCCTCTCAAACTACCTAATTCTGATTTT GTTCAAGGTATGGAAAAAGTAATCTAGATTTCGTTTTTAAGTAGTTTTCT AAAAAAAAGGCTTGAGGTAAATAATTATTAAACTGAAGCTTTTCACCAGG GGAGTGTTTTTTGAGACCCTTTACTCTTGATCATTTTAAATGTTGTCAAA ATAGTTATATTGATATAAGTTGTTTCAATTCTCAGAAAGATCACCTGTTT ATCACCAT

Coding sequence (CDS) from alignment at sc0000103_pilon:459185..460142-

>MSTRG.13177.1.p1 ID=MSTRG.13177.1.p1|Name=MSTRG.13177.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1416bp|location=Sequence derived from alignment at sc0000103_pilon:459185..460142- (Clytia hemisphaerica_ch_hm2_pilon)
AAAGATCACCTGTTTATCACCATGGAACATGGATCTTGCTCCAGCTCCTC
TCAAACTACCTAATTCTGATTTTGTTCAAGACTTTGAAATCATCCAAACC
AATGTGGACCAACAGCAAAATACAGAATTCAAACCACCCAAACAGTACCA
GCCATCATATCAACATAATTCCCAATTCAAATTTCAACCAAGCCAAGAAT
CAACACAAATTAAACCACCACCACCACCACAACAATTCCAACAGCCACAA
GTAGCTAAACAAAAAACTGTCCTGGACCAAGCAACTCCACCTTTCCGAAA
TCACCAAGAATACACCGAAGCCCAGACAAGCCAATGACATGAATGATTCT
GAAGAAAGATCACCTGTTTATCACCATGGAACATGGATCTTGCTCCAGCT
CCTCTCAAACTACCTAATTCTGATTTTGTTCAAGACTTTGAAATCATCCA
AACCAATGTGGACCAACAGCAAAATACAGAATTCAAACCACCCAAACAGT
ACCAGCCATCATATCAACATAATTCCCAATTCAAATTTCAACCAAGCCAA
GAATCAACACAAATTAAACCACCACCACCACCACAACAATTCCAACAGCC
ACAAGTAGCTAAACAAAAAACTGTCCTGGACCAAGCAACTCCACCTTTCC
GAAATCACCAAGAATACACCGAAGCCCAGACAAGCCAATGACATGAATGA
TTCTGAAGAAAGATCACCTGTTTATCACCATGGAACATGGATCTTGCTCC
AGCTCCTCTCAAACTACCTAATTCTGATTTTGTTCAAGACTTTGAAATCA
TCCAAACCAATGTGGACCAACAGCAAAATACAGAATTCAAACCACCCAAA
CAGTACCAGCCATCATATCAACATAATTCCCAATTCAAATTTCAACCAAG
CCAAGAATCAACACAAATTAAACCACCACCACCACCACAACAATTCCAAC
AGCCACAAGTAGCTAAACAAAAAACTGTCCTGGACCAAGCAACTCCACCT
TTCCGAAATCACCAAGAATACACCGAAGCCCAGACAAGCCAATGACATGA
ATGATTCTGAAGAAAGATCACCTGTTTATCACCATGGAACATGGATCTTG
CTCCAGCTCCTCTCAAACTACCTAATTCTGATTTTGTTCAAGACTTTGAA
ATCATCCAAACCAATGTGGACCAACAGCAAAATACAGAATTCAAACCACC
CAAACAGTACCAGCCATCATATCAACATAATTCCCAATTCAAATTTCAAC
CAAGCCAAGAATCAACACAAATTAAACCACCACCACCACCACAACAATTC
CAACAGCCACAAGTAGCTAAACAAAAAACTGTCCTGGACCAAGCAACTCC
ACCTTTCCGAAATCACCAAGAATACACCGAAGCCCAGACAAGCCAATGAC
ATGAATGATTCTGAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.13177MSTRG.13177Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13177.1.p1.exon4MSTRG.13177.1.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13177.1.p1.exon3MSTRG.13177.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13177.1.p1.exon2MSTRG.13177.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13177.1.p1.exon1MSTRG.13177.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13177.1.p1MSTRG.13177.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000103_pilongenomesc0000103_pilon:459185..460142 -