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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000102_pilon:839085..842533+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13128.2.p1 ID=MSTRG.13128.2.p1|Name=MSTRG.13128.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3449bp|location=Sequence derived from alignment at sc0000102_pilon:839085..842533+ (Clytia hemisphaerica_ch_hm2_pilon)
TCTGGCCGCCAGTCAGTTCAAAGGAATCAACGCACATAGACGCGCGctaa
gaaataataataataataataataaaaaacatgattccgaattttgaaaa
taatagcgCGCCAATGACTAATTCGTACGGTTATCAACCTGTGGCTTATG
GTGAAAACGGCTTGCCGTATAATGAAATGGCATCGTCTCAACAGACAGAC
GGACAACAAAAAGAAGGACACAAGTATGGTACCGGCAATAAAACCTTACC
GTATTACGGGAATTCCACATTCAAAGATCCAAATCCTTTTTTCTCTACTT
TTCAACCGAACTTCCACCAGCGATTTACACATTTCGGGGCATCGGGATTG
GGTTATTTTCCAAACCCATACTTAACTTCGTTTTATGATCGTATGCATGA
GATGGAGGCTAAGATTCCATTAGAGTACGCCAGGGTGTGGTTGGATCATC
AGACTTTGTGGAGAAGGTTCAGTGTTTGTGGCAATGAGATGATCATCACT
AAAATGGGAAGGTAAGAATTTCTttcaataggccatttcacagtcgcaaa
gcctAATGGGtaTCAGGACCACTGCGCGCTAATAACGACTTACTATTGGT
CCAAAGTTTTGAACATTTTTGAAGATTTTTGCGTTTAGCCAACAGAAAGC
CTTTACGGAGgcgcaatcagtcctgattactcatgattcatttcgactgt
gaaatggtttATAAACGTGTTCTGGCTAATACAGAATATTGTAGCGTAGA
GGTAGTGTTAGGGATTAAAAGAATACATATACAGTAAGATCTCTCATTAG
AAAACACCATCGGCGAAACTGCTTATTTTGGAGTGTCCGGTAATTTGAGG
TTCTACTattatttcttgtttttgaaaCAGAGTTATTGTCACGGGGACAA
GGGAAACTGTCTCTCTGATAACAATAAATTTGTATTTGGGATCGAAACTG
GAAACAATCGCTGGAAGTGTTTTCTTGCATTTACTAAACATCATATAATT
GAATGCTGAATAAGATGGCTATAATGTTGGTTACTATAGCAATATTTATA
AAATCCACCATGACAGATATTCTAGAGTTGACCGGTCGATCCTTTAAATT
TTAGAAATCTGCTTCAGAAGTGAAAAACCTGAAAGTTTACCCTTTGACCA
AACTTAAAGCCAGCCTAAAATCGCttttttttGATTCTGCTAGCGCTCGC
GAAAATAAGATTGTCCATCAGTAAATTAAAAAAGTGGTGAAAATGGCATC
AGGTACGAAATTTCGCTTTGATATAAAAACGTCATTGCTAGAACTTCAAT
TCTCTTTCAACTTTAGACGTATGTTTCCTGTACTGTCGTTTGGTGTCCAC
AGTTTGAATTTCACAGACCTCTACACAATGGAAGTGGAAGTGATACCTTC
TGATAACAATCGTTACAAATACGTCAGTGTCACAGGCTGGAGAGTCAATG
GCGTCGCTTCTCAGCAAGAAGGTCAGtggaaaactttttgtcaattcttt
cttactctccatgaatacaCTTTCTCGGTCGCTTTTCAATGTAAGTATAA
ACTTCATTGACCAATCAATTagatatatttcaaaatttaatacatTATTT
CGTGATTCTCGACCTCCTTATTTGAAATCCTAGATAAGATTTGCATCCCC
AGATAATTATGGcatttgtttttcctttggCTGAGGCTTTCTTTGCTACA
AAACAACCATGTTACAGTGGATTCTCGAGTTTATTTTCTGTTCCCATGCA
AAACACGCCCTGAAAGTCGAATCTCCCTGTagttcgaacaaaattcccgt
TAGAGTTTAAAttgacgatatcggctttccgaattctccccgaatgatta
cccatgatgcattgcgcaaaaaatttcacggacaatattgacttactgaa
tttttttgcacaatgcatcatgggtaatcattcgaggagaatttcgttaa
gccaaTATCGTCTATTGGCGAGAGCTAACTGTAGTCCCGTGTAAGCGGCG
GGTTCGATCAAAACTAGAGTGTAGTCTCCATAACCCAAACCTCCTCAACT
CGAACAAAATTGTGTTCCGTGCgttttcgagttatgaagactccacTGTA
GGAACATATATATTATTCTAAGTTATTGACTTAAAATCATCTTGTTTCCT
AGGTAATAAATGCATGTACCATCCTGAAGGCATTCAAACAGGCGAATACT
GGCAGAAGAATGGAGTGGCTTTCAAAAGAATCAAGTTAACAAATAAGAAG
ACTGCTAAAGAAGGCTCTAATAATGTAAagtcaaaactttcaaatctttt
tgtaCCTTTctagaaaagctggtaaaatcctAGATCGAAAATAGTTAGGG
ATGGATTCTTGGTATTATCTATCACAAGAACTAAAGGCATTGCAGACCAA
AATCCCAGGGTACTATAACAAGTGAAAGGTACGGGTGTGTTCTTTGGAAC
CCAAAAAGTCCCTCTAAAGGgccggaaaaatcaaaaataaaagctCCAGT
CCCTCAAAGGGTCGGGAAAATAGagtaatttaaattttgaacctcgaaag
attgaaaatgggtcaaattagtcccaaaatAAAGTTTACGTATATTATCC
TACGGTTTTCAAGAACTCTAGAATGTTAGCTTTGATTTCCACTACTCTTA
CtttttttAGATCGTTCTCAACTCCATGCATAAATATCACATCCAACTAG
TTATCAAACAAATCGGATTGGACGACCAAGTTCTCGACACaaagaaattc
gaatttaaAGAAACAGAATTCATAGCCGTTACGGCGTAtcaaaatgatga
cgtcactcaatTGAAGATCGATCATAACCCGTTCGCAAAAGCATTCAGAG
ATAACGCAAATGAGCATTGGTAAGATAATTAAGAAAGGAACATTTTTGGC
GATTGTTCAAGAGtatttttcattgttgttttagATTTGAGTGACCTAAT
GCTTATTAATATCGCAAACGAGCATTGGTAAGATAACTCAAAGTGGACCA
TCTTTACGAACTGTTCGCCAGaactttttaattgttttagtTTTAGATTT
GAGAACTTTATTGCCACTTATGCCCTCTGAATGCTCATTTATATCATATA
ACTTTATCCAAGTTTATTCTCCTTCGtttttttACAGTGAACGATCACAA
TATACAGACATATACATGACCCAACCAAAACGTCGAAAATGTCAAAGCTA
CGATGAAGTCACAAACCAGACGACAAATCACGTGATGAACGACCCCATCT
TGGTTGACAATAGCAACAACAACTCAAACACAACGAATGAAGCGACTTTC
TCCCTTCCTTTAATGAACAACGAGAACCAATCAGTGACCGAGGAGGATAA
GAACCGGCTACTTATGAACTTCAATAATGATACTAGTACAAGTAGCACTT
CATATACCAATGCTTTAACAaacttttcaagtttcaattgTAATTCGAA Coding sequence (CDS) from alignment at sc0000102_pilon:839085..842533+ >MSTRG.13128.2.p1 ID=MSTRG.13128.2.p1|Name=MSTRG.13128.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=6480bp|location=Sequence derived from alignment at sc0000102_pilon:839085..842533+ (Clytia hemisphaerica_ch_hm2_pilon)
atgattccgaattttgaaaataatagcgCGCCAATGACTAATTCGTACGG
TTATCAACCTGTGGCTTATGGTGAAAACGGCTTGCCGTATAATGAAATGG
CATCGTCTCAACAGACAGACGGACAACAAAAAGAAGGACACAAGTATGGT
ACCGGCAATAAAACCTTACCGTATTACGGGAATTCCACATTCAAAGATCC
AAATCCTTTTTTCTCTACTTTTCAACCGAACTTCCACCAGCGATTTACAC
ATTTCGGGGCATCGGGATTGGGTTATTTTCCAAACCCATACTTAACTTCG
TTTTATGATCGTATGCATGAGATGGAGGCTAAGATTCCATTAGAGTACGC
CAGGGTGTGGTTGGATCATCAGACTTTGTGGAGAAGGTTCAGTGTTTGTG
GCAATGAGATGATCATCACTAAAATGGGAAGACGTATGTTTCCTGTACTG
TCGTTTGGTGTCCACAGTTTGAATTTCACAGACCTCTACACAATGGAAGT
GGAAGTGATACCTTCTGATAACAATCGTTACAAATACGTCAGTGTCACAG
GCTGGAGAGTCAATGGCGTCGCTTCTCAGCAAGAAGGTCAGtggaaaact
ttttgtcaattctttcttactctccatgaatacaCTTTCTCGGTCGCTTT
TCAATGTAATAAATGCATGTACCATCCTGAAGGCATTCAAACAGGCGAAT
ACTGGCAGAAGAATGGAGTGGCTTTCAAAAGAATCAAGTTAACAAATAAG
AAGACTGCTAAAGAAGGCTCTAATAATATCGTTCTCAACTCCATGCATAA
ATATCACATCCAACTAGTTATCAAACAAATCGGATTGGACGACCAAGTTC
TCGACACaaagaaattcgaatttaaAGAAACAGAATTCATAGCCGTTACG
GCGTAtcaaaatgatgacgtcactcaatTGAAGATCGATCATAACCCGTT
CGCAAAAGCATTCAGAGATAACGCAAATGAGCATTGTGAACGATCACAAT
ATACAGACATATACATGACCCAACCAAAACGTCGAAAATGTCAAAGCTAC
GATGAAGTCACAAACCAGACGACAAATCACGTGATGAACGACCCCATCTT
GGTTGACAATAGCAACAACAACTCAAACACAACGAATGAAGCGACTTTCT
CCCTTCCTTTAATGAACAACGAGAACCAATCAGTGACCGAGGAGGATAAG
AACCGGCTACTTATGAACTTCAATAATGATACTAGTACAAGTAGCACTTC
ATATACCAATGCTTTAACAaacttttcaagtttcaattgTAATTCGatga
ttccgaattttgaaaataatagcgCGCCAATGACTAATTCGTACGGTTAT
CAACCTGTGGCTTATGGTGAAAACGGCTTGCCGTATAATGAAATGGCATC
GTCTCAACAGACAGACGGACAACAAAAAGAAGGACACAAGTATGGTACCG
GCAATAAAACCTTACCGTATTACGGGAATTCCACATTCAAAGATCCAAAT
CCTTTTTTCTCTACTTTTCAACCGAACTTCCACCAGCGATTTACACATTT
CGGGGCATCGGGATTGGGTTATTTTCCAAACCCATACTTAACTTCGTTTT
ATGATCGTATGCATGAGATGGAGGCTAAGATTCCATTAGAGTACGCCAGG
GTGTGGTTGGATCATCAGACTTTGTGGAGAAGGTTCAGTGTTTGTGGCAA
TGAGATGATCATCACTAAAATGGGAAGACGTATGTTTCCTGTACTGTCGT
TTGGTGTCCACAGTTTGAATTTCACAGACCTCTACACAATGGAAGTGGAA
GTGATACCTTCTGATAACAATCGTTACAAATACGTCAGTGTCACAGGCTG
GAGAGTCAATGGCGTCGCTTCTCAGCAAGAAGGTCAGtggaaaacttttt
gtcaattctttcttactctccatgaatacaCTTTCTCGGTCGCTTTTCAA
TGTAATAAATGCATGTACCATCCTGAAGGCATTCAAACAGGCGAATACTG
GCAGAAGAATGGAGTGGCTTTCAAAAGAATCAAGTTAACAAATAAGAAGA
CTGCTAAAGAAGGCTCTAATAATATCGTTCTCAACTCCATGCATAAATAT
CACATCCAACTAGTTATCAAACAAATCGGATTGGACGACCAAGTTCTCGA
CACaaagaaattcgaatttaaAGAAACAGAATTCATAGCCGTTACGGCGT
AtcaaaatgatgacgtcactcaatTGAAGATCGATCATAACCCGTTCGCA
AAAGCATTCAGAGATAACGCAAATGAGCATTGTGAACGATCACAATATAC
AGACATATACATGACCCAACCAAAACGTCGAAAATGTCAAAGCTACGATG
AAGTCACAAACCAGACGACAAATCACGTGATGAACGACCCCATCTTGGTT
GACAATAGCAACAACAACTCAAACACAACGAATGAAGCGACTTTCTCCCT
TCCTTTAATGAACAACGAGAACCAATCAGTGACCGAGGAGGATAAGAACC
GGCTACTTATGAACTTCAATAATGATACTAGTACAAGTAGCACTTCATAT
ACCAATGCTTTAACAaacttttcaagtttcaattgTAATTCGatgattcc
gaattttgaaaataatagcgCGCCAATGACTAATTCGTACGGTTATCAAC
CTGTGGCTTATGGTGAAAACGGCTTGCCGTATAATGAAATGGCATCGTCT
CAACAGACAGACGGACAACAAAAAGAAGGACACAAGTATGGTACCGGCAA
TAAAACCTTACCGTATTACGGGAATTCCACATTCAAAGATCCAAATCCTT
TTTTCTCTACTTTTCAACCGAACTTCCACCAGCGATTTACACATTTCGGG
GCATCGGGATTGGGTTATTTTCCAAACCCATACTTAACTTCGTTTTATGA
TCGTATGCATGAGATGGAGGCTAAGATTCCATTAGAGTACGCCAGGGTGT
GGTTGGATCATCAGACTTTGTGGAGAAGGTTCAGTGTTTGTGGCAATGAG
ATGATCATCACTAAAATGGGAAGACGTATGTTTCCTGTACTGTCGTTTGG
TGTCCACAGTTTGAATTTCACAGACCTCTACACAATGGAAGTGGAAGTGA
TACCTTCTGATAACAATCGTTACAAATACGTCAGTGTCACAGGCTGGAGA
GTCAATGGCGTCGCTTCTCAGCAAGAAGGTCAGtggaaaactttttgtca
attctttcttactctccatgaatacaCTTTCTCGGTCGCTTTTCAATGTA
ATAAATGCATGTACCATCCTGAAGGCATTCAAACAGGCGAATACTGGCAG
AAGAATGGAGTGGCTTTCAAAAGAATCAAGTTAACAAATAAGAAGACTGC
TAAAGAAGGCTCTAATAATATCGTTCTCAACTCCATGCATAAATATCACA
TCCAACTAGTTATCAAACAAATCGGATTGGACGACCAAGTTCTCGACACa
aagaaattcgaatttaaAGAAACAGAATTCATAGCCGTTACGGCGTAtca
aaatgatgacgtcactcaatTGAAGATCGATCATAACCCGTTCGCAAAAG
CATTCAGAGATAACGCAAATGAGCATTGTGAACGATCACAATATACAGAC
ATATACATGACCCAACCAAAACGTCGAAAATGTCAAAGCTACGATGAAGT
CACAAACCAGACGACAAATCACGTGATGAACGACCCCATCTTGGTTGACA
ATAGCAACAACAACTCAAACACAACGAATGAAGCGACTTTCTCCCTTCCT
TTAATGAACAACGAGAACCAATCAGTGACCGAGGAGGATAAGAACCGGCT
ACTTATGAACTTCAATAATGATACTAGTACAAGTAGCACTTCATATACCA
ATGCTTTAACAaacttttcaagtttcaattgTAATTCGatgattccgaat
tttgaaaataatagcgCGCCAATGACTAATTCGTACGGTTATCAACCTGT
GGCTTATGGTGAAAACGGCTTGCCGTATAATGAAATGGCATCGTCTCAAC
AGACAGACGGACAACAAAAAGAAGGACACAAGTATGGTACCGGCAATAAA
ACCTTACCGTATTACGGGAATTCCACATTCAAAGATCCAAATCCTTTTTT
CTCTACTTTTCAACCGAACTTCCACCAGCGATTTACACATTTCGGGGCAT
CGGGATTGGGTTATTTTCCAAACCCATACTTAACTTCGTTTTATGATCGT
ATGCATGAGATGGAGGCTAAGATTCCATTAGAGTACGCCAGGGTGTGGTT
GGATCATCAGACTTTGTGGAGAAGGTTCAGTGTTTGTGGCAATGAGATGA
TCATCACTAAAATGGGAAGACGTATGTTTCCTGTACTGTCGTTTGGTGTC
CACAGTTTGAATTTCACAGACCTCTACACAATGGAAGTGGAAGTGATACC
TTCTGATAACAATCGTTACAAATACGTCAGTGTCACAGGCTGGAGAGTCA
ATGGCGTCGCTTCTCAGCAAGAAGGTCAGtggaaaactttttgtcaattc
tttcttactctccatgaatacaCTTTCTCGGTCGCTTTTCAATGTAATAA
ATGCATGTACCATCCTGAAGGCATTCAAACAGGCGAATACTGGCAGAAGA
ATGGAGTGGCTTTCAAAAGAATCAAGTTAACAAATAAGAAGACTGCTAAA
GAAGGCTCTAATAATATCGTTCTCAACTCCATGCATAAATATCACATCCA
ACTAGTTATCAAACAAATCGGATTGGACGACCAAGTTCTCGACACaaaga
aattcgaatttaaAGAAACAGAATTCATAGCCGTTACGGCGTAtcaaaat
gatgacgtcactcaatTGAAGATCGATCATAACCCGTTCGCAAAAGCATT
CAGAGATAACGCAAATGAGCATTGTGAACGATCACAATATACAGACATAT
ACATGACCCAACCAAAACGTCGAAAATGTCAAAGCTACGATGAAGTCACA
AACCAGACGACAAATCACGTGATGAACGACCCCATCTTGGTTGACAATAG
CAACAACAACTCAAACACAACGAATGAAGCGACTTTCTCCCTTCCTTTAA
TGAACAACGAGAACCAATCAGTGACCGAGGAGGATAAGAACCGGCTACTT
ATGAACTTCAATAATGATACTAGTACAAGTAGCACTTCATATACCAATGC
TTTAACAaacttttcaagtttcaattgTAATTCGatgattccgaattttg
aaaataatagcgCGCCAATGACTAATTCGTACGGTTATCAACCTGTGGCT
TATGGTGAAAACGGCTTGCCGTATAATGAAATGGCATCGTCTCAACAGAC
AGACGGACAACAAAAAGAAGGACACAAGTATGGTACCGGCAATAAAACCT
TACCGTATTACGGGAATTCCACATTCAAAGATCCAAATCCTTTTTTCTCT
ACTTTTCAACCGAACTTCCACCAGCGATTTACACATTTCGGGGCATCGGG
ATTGGGTTATTTTCCAAACCCATACTTAACTTCGTTTTATGATCGTATGC
ATGAGATGGAGGCTAAGATTCCATTAGAGTACGCCAGGGTGTGGTTGGAT
CATCAGACTTTGTGGAGAAGGTTCAGTGTTTGTGGCAATGAGATGATCAT
CACTAAAATGGGAAGACGTATGTTTCCTGTACTGTCGTTTGGTGTCCACA
GTTTGAATTTCACAGACCTCTACACAATGGAAGTGGAAGTGATACCTTCT
GATAACAATCGTTACAAATACGTCAGTGTCACAGGCTGGAGAGTCAATGG
CGTCGCTTCTCAGCAAGAAGGTCAGtggaaaactttttgtcaattctttc
ttactctccatgaatacaCTTTCTCGGTCGCTTTTCAATGTAATAAATGC
ATGTACCATCCTGAAGGCATTCAAACAGGCGAATACTGGCAGAAGAATGG
AGTGGCTTTCAAAAGAATCAAGTTAACAAATAAGAAGACTGCTAAAGAAG
GCTCTAATAATATCGTTCTCAACTCCATGCATAAATATCACATCCAACTA
GTTATCAAACAAATCGGATTGGACGACCAAGTTCTCGACACaaagaaatt
cgaatttaaAGAAACAGAATTCATAGCCGTTACGGCGTAtcaaaatgatg
acgtcactcaatTGAAGATCGATCATAACCCGTTCGCAAAAGCATTCAGA
GATAACGCAAATGAGCATTGTGAACGATCACAATATACAGACATATACAT
GACCCAACCAAAACGTCGAAAATGTCAAAGCTACGATGAAGTCACAAACC
AGACGACAAATCACGTGATGAACGACCCCATCTTGGTTGACAATAGCAAC
AACAACTCAAACACAACGAATGAAGCGACTTTCTCCCTTCCTTTAATGAA
CAACGAGAACCAATCAGTGACCGAGGAGGATAAGAACCGGCTACTTATGA
ACTTCAATAATGATACTAGTACAAGTAGCACTTCATATACCAATGCTTTA
ACAaacttttcaagtttcaattgTAATTCG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000102_pilon | genome | sc0000102_pilon:839085..842533 + |
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