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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000102_pilon:614314..620074+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13109.1.p2 ID=MSTRG.13109.1.p2|Name=MSTRG.13109.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5761bp|location=Sequence derived from alignment at sc0000102_pilon:614314..620074+ (Clytia hemisphaerica_ch_hm2_pilon)
AGTTCATCTTCATTTTAGATTATAAAATAAAGGCAGTATGAGGTTGAAAT
TTCTACGCAATGTTTTGATTGTGGTACTGTTTACATTGGCAGTCAGTCAC
TTAATCCATGCTTCTCCTCCACTTGATGCATCAACCGTCAGCAAAGCTAA
AGGAGCTTCCAAAGTAGCTGGCTCTCTTTCAGATGTGTCATCTAAAGCAA
GCAAATTCACAAAAGTACTCAATGGAGGTCTTTCTACATTCAGCACATAT
GTTTACGGGATTACAGCAACAATGGCGGTGATTGATTTGATATGGCCTGG
AATCATTCCTACAAGCGAGCCTGCTTACGTGGCCGAGATGAGAGCTTATT
TTGAGGTTCTGAAAGCAGAGTTTCGCGTTGTGAAGAATCAGATCAATGAT
TTGAAATTATACGTTCAAGAACGGAGCACTGATCAAATATACGCCGGTTA
CGTCATTTCAATTCATACCACGGTAATTTTTCCGCAACTATCTTTCTGAA
CACGTTCCCTGTATTAGTGCGAATTCTTTTGTCAGTGGGGATAGAATGat
gtcattactgaaaaggtatTATTAGGAGaaaaaaaGTCTGTAGTTTTGTC
TTAATTGGGcggaaattttaaaaagcacaaaaatccagtttggattttca
aagttttcacatCATTCCAAATGAAGATTAAAAGCTCAGTCCAATGGAGA
CTTCCAAAGGGAAATTTCGGAATTTTaactctaaaaaaaattaactctgA
CGATTTCTAGATTCAATGCCTGCAAATTCTTAGCAAGCGTATAGTAAGTG
TATGAGTGTATTGAGTAGCATAAATATAAATTTGAGTCTGCGAGCagaaa
ttttcgaattgtaaTTCGCCATTCGCCGGGCCTAAATAAAACCCCTGAAT
CAAGAAACTTCTTCAGCTGTGTCTGTGAAAGGACATTATTATTTAATGTA
TCTTCCATACGATTTGCATTTTTATACAAaggaaagaacaatttttttca
ctgtTGGTGTTGCGTGAGCACAaatgagaaattcttttgtttattatGCT
TCGTCAGCATAGAAGGCGCGTCTCCTGTTTACatcaaaaacagatttttt
atatttggcttagagataccttttatggtcAAGAGAGACACCTCTAAATC
TTTTGACCCAATTTTTCCAATGCTGGGATATTTaactttgaaatctctaa
aaatgagtctttacacagtctttacgttgcatttctattgttttcaagta
aaaatttgaaaattcaaagtcgaatatctcagctttggaaatgATTGGGT
CAAAAACTTTAGAGGTGTTTCATaggaccataaaaggtatctctaagcta
aatatcaaaaatcatctgataatccctttaacAATAATACTATTTTCTAC
CAGGAATTGAGTTACCAAGATTACATGGATGCATCTGCATCATTGAGAGA
TGCATATGGAAAATCGTTCGTTCAGAATTACGATCAGTTAGGAAACCATG
CAGATAAATTGTACACCGGACTTGTTATTGCTGATGACAATCTAAACATT
GCCAAAAATGCTATTTCATACACTAAAGGTAATCCGTTTATTTCTTTGAA
TAGTAAAGGCCGGTATCCATTTATTTTCGCGCAAAGTGGAGGACTGtttt
tttCTCAGCCTTTTTTGTCTAAGAAAAGATtgcgtcataaaaaagtttcg
tgtgaacgaaaaaaaagttgaaggaagttcaacttttttcaaccgttacg
tcaattttgaccaatgcaattgtttcattttccaaccgaccttacaaaaa
cgtaagaaagttttcgctcatttcgcgcgaaagtggagaccagccttaaA
GTTGAtctacaaaaatatttagcagTTCAACACAACATACAAAAACCCAA
ACACCAAGGTTTTGGAAAGGCCATATACCAGTCTCTGCCAATAGTTTATA
GCTCGGAACTACTTCATTTCCAGCCGAATATAATTAGACTGCAcacccct
tttcacagacccggaaggattttttcagccaccGGGGATAAAtataacag
actgaaactcgatatggggattgatatttctatATTCTTTATGACTGggg
tttaaattcttttgttttcaagtcagaaaatccagtggggatgaagaAAT
AGCACAATAACTTtactgtgagaagggggtgtgaaaGCTGAGTCCAAGAG
CGTTTTAACGCTGTGAATAATTTTACCTTAACGCACGTGAAAAAGAGGGC
TTAAAtcgattttaaagatttttatggGTTCTGATTCTGTAAATCGTact
catttttgctaaaatagTCGTGTTGGCATTTTTGCACCAAGTTGGCAGGA
ATATCCAATTTAAACATTGAAACCAAGGATAAGACAATGTGAACTAAATa
gctcgaacacgcacgggaaacacttgttcgagttaagggtATTTCAAGTT
ATGgaataaggtttataaggcattgttaactgaagggaccaggaAAACTT
GTACGAGTTAAGGAGACACTCAAGTTTTAAAGTTTCGAGTTATGAGAGTC
TACTGTATCTATATAAAGATTTAATTTACTTCGCTTTTAAGGTGACAGAG
ACAGAATTTTGGAGATCATGTTTGAGTTGTTCAACGTCATTAACATGGGT
ATCAAGCATGAAGCACTTTATTACAAATTGACGGACGATACAGAACAAAT
TGCCGTGTTGGACGACCGATGGGGTTCTCGAATGAACAACCTACAGAAAG
TGATGAAAGCAATCGATGATGAGGTTGTCAAAGGTGCAAACGATCGAATG
CAAACAgatttcaatgaaaatgtcGTTGAATTGAAAGATAAAGACAACAA
GAAAATGGCGCAGAATTTGTACGATTTCTTCAGTGAGAAATACTACTGGA
GAGGACTGGGTGGTACTTGTTTACTCAAAGTCTGTTTCAGGCTTTAGCAA
CCATGCTTATAATTACTGCCGTAACAATTGCATTTTCCGAAAGAGGTTGG
GTGGCGGTGTGGATAAAACCATCTACGTGTTCCATGTGAATAAAGCTTCT
GGATCATGGATGACGAAAAGTAAAGCTAGTAAGATCCTCTCAACTGGACC
TTACACCTACAAAGGTAAATGTTATAAGTATGAATGGTTCTTCTTCTCAA
GATATCGGAAAAGCTACTCATGTGATAAACCACAGAAGGACTTAGCGAAA
ACCAGAGATGCAGTGCGAGGTGAGCTTAAAGTTTGTAGCATTACTAAAGC
CATCGTGATGCTTAAGAAAAAGCATAGTTACGGCATCGTTGGAGATGATA
GAATCAAAGTTCATTTGAAGAAAGGAGATTTCAATGCATTTGCAGTTGGC
CCTTATGGATCTTCGAGTGCTCAAGAATCTGTGGAAGGTTATTCAAGTAA
GCTTATAAAATTCACTATTTGTTTAAGAAAATTATTCAAACAAACGATTT
GAAGTTGCAAAATGAAGTAACGGGTTCTAGGTTCTATTTTATCGTCAGAT
AGTTTATACGTTTTATAAGTTATTAAGCAGTAGAGCTATCTACATTTATT
TGTGTAGCAAATCTTGATTGACTATGAGGACAATAGTTAAAGCAACTTTT
TGGCAAGTTCGCAATGCATGCGTCCCTGAAATCGTCGGTCTTATTCGTCG
TGAGAATCGAAACTGACGTACTTTTCGATGTCGGACTTTATAACACATGC
TATCAATGTATTACATGCATGTTATGTGAAATTAGCTATATCAACTAAAA
ATCGGGAAGCATACATTGCGAACTtgcctttttttgatttttttattcag
ccaagattccctaaaatattttttctttgtttttcgtGCAGTAAATGGAG
GCTGGACTTCTTGGACTCCTTATACGAGTTGTTCAAAAACATGTGGAGGT
GGAATTAAAACAATATCAAGATATTGTAGAAATCCAGTTCCTCAAGATGG
TGGAAAGTCTTGTTCGGGGCGTAGTACTTATAGCAGATCTTGCAACACGT
TCAGCTGCTTCTGTAAGCATTCTATTCGCATTTTATTCAACACccatctg
gcacacaacgttgtttcaacgttcacataacgttatatggatgttgtgaa
cgttagataaacgttgaaacaacgttgtttgccagctggGCAGTTTGGTT
CCCTTTCCAATCGCTTCTTttagcttcaatcctttttgatACTGCGAGGC
TATGAATACTAAACTGTGACGACTAATCAGGTTTCTTTtaagttgtttca
acgttcatcaacgttatatggacgttgtgaacgttagatgaatgttgaaa
caatgttgtgtgccagctggggataAAGCGGTACCAATTAAATTACGAAT
AAGAAACATAGAAAAGACTCAATGAAAAAGAGCTGGTTGAATCCATTGCA
TATGAATACGATATTTTAGATCGGAGCAACGAaatcccagctggtacaca
acgttgttttaacgttcaaataacgttatttggacgttaagaatgtcaca
tggacgttgttttgacgttgtgtgctgTCTGGGATAGCATcgttttcttt
taaatcaatAAGGTAGAGGCTTTGAAATGTAAAATCGCTTACAAAGACCT
ATAAAGTAAATTGTTTGATTCTATTCCTTTCAGCGAAgacatttttgaag
aaaaaaatcgaaagcaTCATGATTTCAAAGAAGAAATTGAGTAACACAGA
CTTTGCTGTATATCTTCGTGCGCAACTCAAAACAACTTATCCAGAATATC
GTTTTGCCGTCAACGCGTACAAATCCATCCGTGGTTCAAGCAAACATTCG
ATGCAGGGATACAGTTACGTTTACATCTTCCGTAAGCACGGCCGTAATGT
GGTCGTGTCCTACACTAAAAAGTCAAACAAAGTTCCGAATTCGTCCACTT
TGAGGGCGATCGAAAAAAGAATTGTTGCTGCTATCAAAAATAAGGTTAGA
AGATATCTTTTACATCTCCTCCACGGGTTTTGCTTTGGTGTTTGTTTATC
CTGGTGAACgacaaatgtcaaattttgatgacagtttttCGTACTTTAGA
GCTGATAGCAAATTCGAATTTCCACAACAGTTTTTGAATAAAGCGTTTTT
TGTTTCACTAAACACTGTTCTAtttacagttgatgctctctaattcaacg
ttctactattcgataggctcctcaatttgatgaaatttaaagtccccgtc
aacaagaaactctcatacacgacgctcccttattcgataagttcccttat
tcccttattcgatgaaaactGCTAACAAAAGTATAATTTAACCGATTTGA
CAAAAATGCATGGACTCACCACTATGCtccctttttcatttttatacagG
GTAAAGACGCAAAGAAATCACGTCAATTAGCATGGGCCGCTTTGAAGAAA
GAAGGTTATCGTGTTGCCATGGTACTAGTGGTGCGATTTGGAAACGGGTT
ACGCACAAGATCGACTGGCGGCGGTGTAACCttcgaaaatttcaattctT
CTGGGAGTCACAAATCTTCGCTCGTTATtatgcttggaaaagcttaacTT
TTTTGTTGGAGTTTTGTTATCATAATTACAATTTCATAACACCTTAAGTG
TTTTAACTTTGGCGGGATAAATTTGGAACATTTGGCAGATTTCGGTTAAA
TCCTCCAAattaaattcaccaaaattttgaaaaattgaccgTCCGCCAAT
TCAACtacccgccaaatttaacaaaactCTTTTtagaatagaaattctat
ccaAAATCAGC Coding sequence (CDS) from alignment at sc0000102_pilon:614314..620074+ >MSTRG.13109.1.p2 ID=MSTRG.13109.1.p2|Name=MSTRG.13109.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2898bp|location=Sequence derived from alignment at sc0000102_pilon:614314..620074+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGGTTGAAATTTCTACGCAATGTTTTGATTGTGGTACTGTTTACATT
GGCAGTCAGTCACTTAATCCATGCTTCTCCTCCACTTGATGCATCAACCG
TCAGCAAAGCTAAAGGAGCTTCCAAAGTAGCTGGCTCTCTTTCAGATGTG
TCATCTAAAGCAAGCAAATTCACAAAAGTACTCAATGGAGGTCTTTCTAC
ATTCAGCACATATGTTTACGGGATTACAGCAACAATGGCGGTGATTGATT
TGATATGGCCTGGAATCATTCCTACAAGCGAGCCTGCTTACGTGGCCGAG
ATGAGAGCTTATTTTGAGGTTCTGAAAGCAGAGTTTCGCGTTGTGAAGAA
TCAGATCAATGATTTGAAATTATACGTTCAAGAACGGAGCACTGATCAAA
TATACGCCGGTTACGTCATTTCAATTCATACCACGGAATTGAGTTACCAA
GATTACATGGATGCATCTGCATCATTGAGAGATGCATATGGAAAATCGTT
CGTTCAGAATTACGATCAGTTAGGAAACCATGCAGATAAATTGTACACCG
GACTTGTTATTGCTGATGACAATCTAAACATTGCCAAAAATGCTATTTCA
TACACTAAAGGTGACAGAGACAGAATTTTGGAGATCATGTTTGAGTTGTT
CAACGTCATTAACATGGGTATCAAGCATGAAGCACTTTATTACAAATTGA
CGGACGATACAGAACAAATTGCCGTGTTGGACGACCGATGGGGTTCTCGA
ATGAACAACCTACAGAAAGTGATGAAAGCAATCGATGATGAGGTTGTCAA
AGGTGCAAACGATCGAATGCAAACAgatttcaatgaaaatgtcGTTGAAT
TGAAAGATAAAGACAACAAGAAAATGGCGCAGAATTTGTACGATTTCTTC
AGTGAGAAATACTACTGGAGAGGACTGGGTGGTACTTGTTTACTCAAAGT
CTGTTTCAGGCTTTAGATGAGGTTGAAATTTCTACGCAATGTTTTGATTG
TGGTACTGTTTACATTGGCAGTCAGTCACTTAATCCATGCTTCTCCTCCA
CTTGATGCATCAACCGTCAGCAAAGCTAAAGGAGCTTCCAAAGTAGCTGG
CTCTCTTTCAGATGTGTCATCTAAAGCAAGCAAATTCACAAAAGTACTCA
ATGGAGGTCTTTCTACATTCAGCACATATGTTTACGGGATTACAGCAACA
ATGGCGGTGATTGATTTGATATGGCCTGGAATCATTCCTACAAGCGAGCC
TGCTTACGTGGCCGAGATGAGAGCTTATTTTGAGGTTCTGAAAGCAGAGT
TTCGCGTTGTGAAGAATCAGATCAATGATTTGAAATTATACGTTCAAGAA
CGGAGCACTGATCAAATATACGCCGGTTACGTCATTTCAATTCATACCAC
GGAATTGAGTTACCAAGATTACATGGATGCATCTGCATCATTGAGAGATG
CATATGGAAAATCGTTCGTTCAGAATTACGATCAGTTAGGAAACCATGCA
GATAAATTGTACACCGGACTTGTTATTGCTGATGACAATCTAAACATTGC
CAAAAATGCTATTTCATACACTAAAGGTGACAGAGACAGAATTTTGGAGA
TCATGTTTGAGTTGTTCAACGTCATTAACATGGGTATCAAGCATGAAGCA
CTTTATTACAAATTGACGGACGATACAGAACAAATTGCCGTGTTGGACGA
CCGATGGGGTTCTCGAATGAACAACCTACAGAAAGTGATGAAAGCAATCG
ATGATGAGGTTGTCAAAGGTGCAAACGATCGAATGCAAACAgatttcaat
gaaaatgtcGTTGAATTGAAAGATAAAGACAACAAGAAAATGGCGCAGAA
TTTGTACGATTTCTTCAGTGAGAAATACTACTGGAGAGGACTGGGTGGTA
CTTGTTTACTCAAAGTCTGTTTCAGGCTTTAGATGAGGTTGAAATTTCTA
CGCAATGTTTTGATTGTGGTACTGTTTACATTGGCAGTCAGTCACTTAAT
CCATGCTTCTCCTCCACTTGATGCATCAACCGTCAGCAAAGCTAAAGGAG
CTTCCAAAGTAGCTGGCTCTCTTTCAGATGTGTCATCTAAAGCAAGCAAA
TTCACAAAAGTACTCAATGGAGGTCTTTCTACATTCAGCACATATGTTTA
CGGGATTACAGCAACAATGGCGGTGATTGATTTGATATGGCCTGGAATCA
TTCCTACAAGCGAGCCTGCTTACGTGGCCGAGATGAGAGCTTATTTTGAG
GTTCTGAAAGCAGAGTTTCGCGTTGTGAAGAATCAGATCAATGATTTGAA
ATTATACGTTCAAGAACGGAGCACTGATCAAATATACGCCGGTTACGTCA
TTTCAATTCATACCACGGAATTGAGTTACCAAGATTACATGGATGCATCT
GCATCATTGAGAGATGCATATGGAAAATCGTTCGTTCAGAATTACGATCA
GTTAGGAAACCATGCAGATAAATTGTACACCGGACTTGTTATTGCTGATG
ACAATCTAAACATTGCCAAAAATGCTATTTCATACACTAAAGGTGACAGA
GACAGAATTTTGGAGATCATGTTTGAGTTGTTCAACGTCATTAACATGGG
TATCAAGCATGAAGCACTTTATTACAAATTGACGGACGATACAGAACAAA
TTGCCGTGTTGGACGACCGATGGGGTTCTCGAATGAACAACCTACAGAAA
GTGATGAAAGCAATCGATGATGAGGTTGTCAAAGGTGCAAACGATCGAAT
GCAAACAgatttcaatgaaaatgtcGTTGAATTGAAAGATAAAGACAACA
AGAAAATGGCGCAGAATTTGTACGATTTCTTCAGTGAGAAATACTACTGG
AGAGGACTGGGTGGTACTTGTTTACTCAAAGTCTGTTTCAGGCTTTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000102_pilon | genome | sc0000102_pilon:614314..620074 + |
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