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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000102_pilon:605492..608609+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13107.1.p1 ID=MSTRG.13107.1.p1|Name=MSTRG.13107.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3118bp|location=Sequence derived from alignment at sc0000102_pilon:605492..608609+ (Clytia hemisphaerica_ch_hm2_pilon)
atataacactatataactataacacaTTTATTATCTCCTTAATAATATAC
TTCTCATACGTGATAAAGAACCCATAAGATAAATGTCTGCAATATGTAAC
TTCTTACACCAAGTCTCTCCCCAATCGGAAAGATCTagtttcaatcacca
attccgcccttctcctcttttcctctattttctatctctaactctgtttt
ttctgatttctggacttagttttttctgaatttgactatttgaagctatt
ttgcaaattctgaaattatactcccacacctcggttcgaaccaccaaatg
caagcaaccttggtttccaAACCCGACGCCTTACCACTTGAGCTATCGtc
gcacagcaaaatcacgcaattaATAACATATTATAACAAACtagcaaaag
acgggggtaatgttattataatatgggtaaaagtacccctttttaagcct
gactgaaattcgagccgttactagcaaccctgcggggctcaaggcgccga
gtatgcacccggcacagttacaagccgttactagcaaccctgaccctaac
caatgtcaattgaattctcTACTTGCACTAACTGATAATCGAATCCTGAC
CCCGGAAAATTACCACGGactagaaagaacgaaaaaaattgaaggggcgg
aattgctgattgaaactagttttcaccAGATCAATCGTCATCTTTTTGAT
CCACCTTGATCCACGACGATCCACGTTGCTTGAAGTCTTTGGGtttatct
catttaaaacgaatGTAAATTCAGGTGCTCTTtgcttaaaagttttttaa
gtaTAACGATCATTATGAGCAAACAGTATCGATTTGCAAGTGGATCCCCA
TCAAAACGGGGTGAAAAAGCAGGGGGGATTTCTGCTGCTGCTTTTCAAGA
TCATTTCTCTCGGAGACTAAATCTAGATGACGGGAAACCCAAAAGGACTA
TCAATCATCCTCTTCCAGTCGTTAAAAGGAAAGAGGTGAAAGCTAAACaa
aaaaaGACAGATTTGCCATCGAAAGAAAAAGACTTGACTgatattttgaa
aggaaaaaacGACGAGAGAGTGCTGTCTCCTGATGGTAACAGTGGTGCAG
CAGCTTTATCGAAGAAAAACATGTCACTTGCTGAAAAGTATGGTCTCCTA
CCATCGCCGATAATGAATAAAGAGAAAGTCCTTTCTGAGCGTCAATGGGA
GGTTTTAAAAAGGAAAGCAATGGTTCGTGGAGATATTGAATCAAAATGTC
CCATTTGTAAAGAAGATTATACTTTATTTCGAGAACAAATTCTCCTTTCG
TGCTCTCACACATTTCACAAAAAGTGTATCTATTCATTTGAGAAATACTC
TGGTAAACAAACTTGCCCTATTTGTCgatttgaaaattatgaaaggCGTT
TGATTTTTGATGGAGCATTTATTTGTTCCAATAAGGCAGCTCTGAAGATA
CAATCAAAATGGCGTGCTTACACAGTTAGGAAACGATTCCTATCAGAGAA
CAAGGATCGAGTACCACAGAATCTTATGTTGAGAAAgaaattctatgaaa
aaaagTTCATGAACATGGCAGAAGAGATCCATAACAGCTATGATATTCAT
AGTGCAAACGTGGATAGTTTCATTGCCGAAATAGATCGTAATATTGCCAC
CAGTAAATCTTTAATGgagaatttaaattttaacaGTGAGAGTGATTCTT
GGAGCGAGATTCATAACTTGGCTTTAAGACGTGACAATAATGAATGTCCT
ATATGTTTAGGGTTGTTAAactcttcaaaaaaaatcgtcCTACTAAATTG
TTCTCATTTATTTCACGAACGATGTCTTGCTTCATTTGAGACCTACAGTG
CATGCTCGAATCATTTATGTCCAGTATGTAGATCAATGTACATGAAAAAG
GAATACACtgtaaaacaaaaatgaattaGGCATGTTTGCAGACGTTTCGA
AATCGAAAACGAATTGAATTAATAgtatgtacatgtttttttttttataa
gcattgcacttataagcatatgtaggctcagatatggggaaaaattaagc
atatggcaaagCATTGCTTGAgcctacaaaaaatatttttccctgatttt
ggctttttttggctggaatttcacggattttcagtatttccctaaattta
tgctttagatttaagcatcccctcaagcatttttcagccttattaagctt
tcgaactaagcatctctgagcctgttttcggatttttgtatgcttataaa
aaaaaaaacatgtatctatTAAGCTTCGTACTCccttgtgcaaaaaatcg
tttATCAGTTAGGCGCACTTAAACGCCATTTATGTATTTACTACAAAGTG
ATTTGAATAAAAGAGAGGGGAAAAGGAGTTAGGCGCACTTAAAAGcgata
aaaaaaaactcttctctcttcaaatttcaaaataactgAATAGTATTTAC
ACACGGTGTCTTTGATGATCGCGTCGAaatatcaaaactttttgatacga
aatatcaaaacttttttatattcGCGTTTAAGTGCGCTTAGCAAAATCAA
GGCGTGTATGTGCGCTTAAGTGCGTTTAGCGAACGTACTCACTAGAAAGC
AAAATGTGTTCGACGCACTTAAACGCACTTAAACGCGATTTTCTGCAcaa
gtgagtaccaagctttaCACAATTCATTATTTTTAAGGAAAGATTTAAAT
GCAGCtttttttGACAGAAAGGTTGTATATATGTGTCTTTTGTACataaa
atgttttgctttataATAAATATTATGAAAGATTCAAACTTCgataattt
ttatcttttttagcGTGGCCCAATCGTACCTTTTCTCCAGACAAGTCCAA
ATTTTCGGGCTAATGAGTTTTACCTGTAAAGTCACTCTATTgatcataaa
aagttttgacaGGAATGATTTGTAGGGCCCCTCTCAGAAAGTCTCGAAAT
TCTACCgtacttacctataacaatccaaaagttggGTTTAATCGTGATGG
ATAATTTATTTTGAGTCATCAAGAAAGATAGAAAACAAAGGAGATAAATG
TATGATGAGGAAGCGAAACCAATGTTTGTATTGACAAGAGgtaaaatttt
cctgtttttttttttacg Coding sequence (CDS) from alignment at sc0000102_pilon:605492..608609+ >MSTRG.13107.1.p1 ID=MSTRG.13107.1.p1|Name=MSTRG.13107.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1110bp|location=Sequence derived from alignment at sc0000102_pilon:605492..608609+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGCAAACAGTATCGATTTGCAAGTGGATCCCCATCAAAACGGGGTGA
AAAAGCAGGGGGGATTTCTGCTGCTGCTTTTCAAGATCATTTCTCTCGGA
GACTAAATCTAGATGACGGGAAACCCAAAAGGACTATCAATCATCCTCTT
CCAGTCGTTAAAAGGAAAGAGGTGAAAGCTAAACaaaaaaaGACAGATTT
GCCATCGAAAGAAAAAGACTTGACTgatattttgaaaggaaaaaacGACG
AGAGAGTGCTGTCTCCTGATGGTAACAGTGGTGCAGCAGCTTTATCGAAG
AAAAACATGTCACTTGCTGAAAAGTATGGTCTCCTACCATCGCCGATAAT
GAATAAAGAGAAAGTCCTTTCTGAGCGTCAATGGGAGGTTTTAAAAAGGA
AAGCAATGGTTCGTGGAGATATTGAATCAAAATGTCCCATTTGTAAAGAA
GATTATACTTTATTTCGAGAACAAATTCTCCTTTCGTGCTCTCACACATT
TCACAAAAAGTGTATCTATTCATTTGAGAAATACTCTGGTAAACAAACTT
GCCCTATTTGTCgatttgaaaattatgaaaggCGTTTGATTTTTGATGGA
GCATTTATTTGTTCCAATAAGGCAGCTCTGAAGATACAATCAAAATGGCG
TGCTTACACAGTTAGGAAACGATTCCTATCAGAGAACAAGGATCGAGTAC
CACAGAATCTTATGTTGAGAAAgaaattctatgaaaaaaagTTCATGAAC
ATGGCAGAAGAGATCCATAACAGCTATGATATTCATAGTGCAAACGTGGA
TAGTTTCATTGCCGAAATAGATCGTAATATTGCCACCAGTAAATCTTTAA
TGgagaatttaaattttaacaGTGAGAGTGATTCTTGGAGCGAGATTCAT
AACTTGGCTTTAAGACGTGACAATAATGAATGTCCTATATGTTTAGGGTT
GTTAAactcttcaaaaaaaatcgtcCTACTAAATTGTTCTCATTTATTTC
ACGAACGATGTCTTGCTTCATTTGAGACCTACAGTGCATGCTCGAATCAT
TTATGTCCAGTATGTAGATCAATGTACATGAAAAAGGAATACACtgtaaa
acaaaaatga
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000102_pilon | genome | sc0000102_pilon:605492..608609 + |
|
