MSTRG.13087.1.p2 (mRNA) -

Overview
NameMSTRG.13087.1.p2
Unique NameMSTRG.13087.1.p2
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000102_pilon:297598..299796-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.13087.1.p2 ID=MSTRG.13087.1.p2|Name=MSTRG.13087.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2199bp|location=Sequence derived from alignment at sc0000102_pilon:297598..299796- (Clytia hemisphaerica_ch_hm2_pilon)
TATCTAATCACTAATAACTTTGAATGAAAAGATATGCAAGCTGCAATAAA ATGATAGGTCAATGGTAAGAATCATTGCAAAAAAATGCAAGACAAGATGT TGCGAGTTGCTGTTATTGAAGGAGGCTATAGCAAAGAAAAAGATATCTCA GTGAAAAGCGCTCAAGGTGTTTTTGAGAACTTGGACTTATCAAAGTATCT TCCTACTCGTGTATACATCGACGACGTTGAATGGACGGCGTACGACGCCG ACGGACGGTACCCGATTAATAAAAATGACTTCAGCTTCATACACAAGGAT AACATAAAGATCACTTTTGACGTTGCTTTTATTCTAGTTCATGGGACTCC AGGTGAGGATGGAAAGCTGCAAGGTTATTTCGATATGATAGGTATTCCTT ACACGACTTCATCTGCTGTTGTTACCACGTTAGCTTTTCACAAGTTTTAC GTTAAGCAATTCATCCGTAGCTTGAATCTAGCAAACGTGGCAGAAGCGGT GTTAGTGAAACGTGGTGAAACAGTGAATGATGATGAAGTACTGATGAAGA TTGGGTTACCGTGTTTTGTTTTGTTAAACCAACAGATGGTGGCAGCAGCT ATGGCGTGACCAAGGTGAAAGAGAAGACACAATTACAAGAGGCCATTTCC CTGGCATTTAAACATGGTAGTCAGGTATACTTTTCTAAGCTTGCTAGATT TTTTTGTCTTGGAAAGTTATGTGTATTCAATTAAATTACCCTCATGGGAA TCATTCTAATGAAATATAATTTGAGGCAAAAGTAGTGCATTGATATACAG GGTGTCCCTAATGAAAGTATCGAGTCGAAACACAACGATGAGTAGAAACT TTTATGTGTGTATTCATTATTCATTATTTTATTAGGGATAACACACACAA ACTTTTCTACTCAATAGCATGTTCAAACTCGATACTTTAATTAGGGACAC CCTGTATGAGAGCAGCTATACTTAATGTATTTTGAAGAGTGAAGGGATTT TTGAGTGACCTTTTTCTCTAAACAAGAAAATTGACCAACAAGTTTTTTTG ACAAGACAAGCTGTTTTCAAATTAATTATTTAATTTCTTTCAAACTACGA TTACCTAACAATGTAAGCCACAAATTGCTACCGTGAGTATCACAGCTCGA ATGGATTAATATTTTCTCTTTGAAAACTTGGCCTCTGATACTCAGGGTAA CAAATTGCAGCGCGTTAACTTTTAATTCAATAATTCGAGTATACAATAAT ACACATAATCGCATCTTGATTAAAGATACTATTTCACTTCATCCTCGTGC CCAGGCCTAACCCTTTTTCTTTGTGTGACGAGGAGATTAGCCCTGACTTT TATAGCGAGCCTCGTTTCGAGGCCAAAACTCGTGACCACGCCCTTAAAAA TGGAGATTTCGACAATATGAAAAAACACCCTAGGGATTCACGCAAGGATC AAGTGTGCCAAGTTTCAGCCAAATCTGACCATTTTTGAAGTCTCCAGCCT TCCCCAAAGTTGAGAACCTCTAAAATGTAAGTTTAAACTTTAGAATCCAG CGTTAACTTAATAACTTTGAAACTTCACTGAGCATTTCTTTTTTTTTTAA ATCAACAAATTCATATTGAAGAGTCCCACTTCTCAGTGATTTGACTTCTA CTGGCTACAAAATTGCAAAATCATTAATGCAGGTTTGTCATGTTATTTTG CAGGTGATGATCGAATCATTTGTCGGTGGACGGGAAATCACTAACGGGGT GTACCGAAAGGCCGACAAACAAATCAAAGTCCTCCCGATCACTGAGATCA TTACCGACAACGAATTTTTCGATTACGAGGCTAAATATGAAGGAAAAGTT GATGAGGTGACACCTGCTGATCTTGATGACAAAATGACTATGAAAATCAA AACTCTCACACAACGAATTTACGATGCTTTGGGGATGAGAGGTGTCGTTC GTATTGATTACATCATCAATGATGTAAACAATGAACCCCATCTTATTGAA ATTAATAACGTCCCTGGCCAATCAGCGCCGTCCAGTATTATCCCACAAAT GGCACGATGTGAACAAATATCGTTACACGAGCTGTATGGAGATTTGATAC AAGCCAGTTTAAATCCTTGAAGAAAACAACAAAATTATATATTTATAACA TATCAAATAGGAAAATACTTTTAATAAATTCCCTCTGCAGTCTAAAGTT

Coding sequence (CDS) from alignment at sc0000102_pilon:297598..299796-

>MSTRG.13087.1.p2 ID=MSTRG.13087.1.p2|Name=MSTRG.13087.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=414bp|location=Sequence derived from alignment at sc0000102_pilon:297598..299796- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATCGAATCATTTGTCGGTGGACGGGAAATCACTAACGGGGTGTACCG
AAAGGCCGACAAACAAATCAAAGTCCTCCCGATCACTGAGATCATTACCG
ACAACGAATTTTTCGATTACGAGGCTAAATATGAAGGAAAAGTTGATGAG
GTGACACCTGCTGATCTTGATGACAAAATGACTATGAAAATCAAAACTCT
CACACAACGAATTTACGATGCTTTGGGGATGAGAGGTGTCGTTCGTATTG
ATTACATCATCAATGATGTAAACAATGAACCCCATCTTATTGAAATTAAT
AACGTCCCTGGCCAATCAGCGCCGTCCAGTATTATCCCACAAATGGCACG
ATGTGAACAAATATCGTTACACGAGCTGTATGGAGATTTGATACAAGCCA
GTTTAAATCCTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.13087MSTRG.13087Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13087.1.p2MSTRG.13087.1.p2-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13087.1.p2.exon2MSTRG.13087.1.p2.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13087.1.p2.exon1MSTRG.13087.1.p2.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000102_pilongenomesc0000102_pilon:297598..299796 -