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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000102_pilon:293087..295957- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13086.1.p1 ID=MSTRG.13086.1.p1|Name=MSTRG.13086.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2871bp|location=Sequence derived from alignment at sc0000102_pilon:293087..295957- (Clytia hemisphaerica_ch_hm2_pilon)
TTTTTGGCGTGGTTATTCGAAACTTGCTGAAGATAGCAAAAAAAAATCCT
ATTCAAGACTTGTATTTAAGCTAGGTACTATCGGACTGTCAGTTTATTTA
TAGTCTGAGAGCTCTTTCAACAGAAATTGAAATGACGGTCAAGTTGATGA
AGTTGGATCTCATACCTCTGGTAATGCTACTCATTGTAGCACCAGTCTCC
AGCTCTGAATCTAACATCGGAAATTGTTCGTGTGAATATGGTGAATATTG
CTATAAACCTTTTACTCTAAAACAGCCCACCAATGGGTATATTGATCGTG
GAGAGTGCACTTATGGTCAAATATGCGATTGCAGTCATCGGAATATGACG
CAAATTCCTTCAAACATTCCGATCCATAATCTAGTATCGCTCAACTTGGC
AAACAACTATATTACCACTGTAAGCGATCAACTCATCTCAAAGTTTACCA
AATTGAGATATTTGGATTTGACCAGTAACCCGATCACAGAAAGAAAGATA
TTCAAAGAACCGTTACCAGCGCTTTTCGAGCTTCGACTCCAATCAGGATC
CTTGGACACTGCTTCACTGAATGGATTTCATTTGTTAAGAAAATTGGTTA
TTCATGGCGATAACACTTTGACCAACATCAATATGAAGGTATTAAGTGAA
TTAAAACAACTAGAACAGCTGGAAGTTCTTTACACCAACCTGACAACGCT
CCCTACATTTTTTATGGATGGATTTTATAGACTTAAGAAACTTGAATTCA
AAGGTAACAAGAACCTGGAAACTATTGGATTCGAAGCCATTCAGAATACT
CCAAATCTATTACAGCTCATCTTAAAGGACAACAATTTGAAAAAACTTAC
TGGCCCAATCACCAAGAACGCAAGGCTTTTAGCAGATCTAGATCTCAGCT
TTAATCAGCTCTCCACCATCAATGAAGAAATGCTTCAAGGTTTTAAAAGT
CTTGAGAAATTGGATTTATCAAATAATGGAATACGTTTGACATCGTCCTT
GTCAAAAAGTGCCCTTGCAAGATTACCGAAGAAGAAATTAAAGGAACTGC
GTCTAAACAATAACTTGATAAATCGACTGCCGCGTGGTTTTTTTGGAAAT
AGTGAGCACTTAAGTATTTTGGATCTCAGCTTCAATAACTTCAAAAGCTT
AAACACAACTAACTTCAAATATTTGCGAAGACTTGAAGTCCTCAAATTAC
AAAATATAGGATCTGATTTGGTTCATTTTGAACTTGATCTTCGTCGTTTG
TCGTACCTGCGAGAAGTTGACATCTCCAGCAACTGCGCTTCGTCTTGGTT
AGTGTCCAGATTTTATTTATCCAATGCGAAAATTGTGAATATCAGTAACT
CGTGTCAAAAAACTTTACCCTCCTTCAATTCAAAGTACCTTGATTTAAGT
TTCAATAACCTTTCCAAAGTTGTACTTGACTTTATAAACACTGAAGGGTA
CGTCAATTTATCTTACAACCAAATCCAAAGCATTGAAATCAAGAAGGATT
TTAAAACTGTTGATCTTTCCCATAATTTGATAGAAGACATAACCGACATT
AAGATCAATCCCGATGTTTGGCTTGGAAATTTGAACTGCAGTCATAATCA
TCTAACTACGATCAGGAGATTCTCTAATGTCATTGAAATCAGTCCAACGG
GTCCGTATCATTTACGCCAAGAACAAGGTTTGGATTTTTCACATAATTCC
ATTCAGCATATCGATCTCGATGCGTTCAGTGCTTTTTCTCAACTCCGCTA
TTTGAATCTCAAAGGAAACAAACTTAATGACTCATTGCGTTTGGAACTCT
CCAATAAACTGAAAACGATAAATCTCGGGACAAATAGTTTTACTAAGGTG
CCTACCTTTTTCCCGAGCTTGATAGATTTGGTAACTATTGATTTATCGGG
AAACTCGCTTAAGGAAGTAACCGAAAACTCGTTCAACGGATTCAACAAAC
TTCGTAATCTGAACTTACGAAATACCAACCTTACAGACTTACCGAAAAAT
TTCTTGAGATATAATACTGAGAAAATAAGCGGTGTGTTGGATTTATCAAA
TAATGATTTTCGGTGCAGTTGTAACGTTTTATCTGCAATCAAACAAGTCA
CAAGAGAAGCTACCGTTATCGGTGATTGTCGCTCTAATGCTACAAACGAC
CTCCAAAAGTTGAGCGATCGAGCTTCTATGTTTATCATTGGCGGAAAGAT
TGGGTGTGATGTTTGTTCGCAAGACCCGTGTCGGAATTTTGGTAAATGTG
TGCAAGATAAAAATGGAGCGAGATGTTCATGTTTTTTTACATATACCGGT
ACATTGTGTGAAAAAAGGGAACACGATACAACCGGACGACCTTTCCTTGT
TACTACTGAAGAACACGATCGTACATATAACACTGAAACACTTTCGAACC
ATACTACGGATAATTATCATCCAACACGAACTGACGATTACCAAGGAGAC
AACAACTCTACAACTTCTGGCGGCGCACCCACAACCACTTTAACACCTGG
CAGAGGGGAGAACGAGGGGCAGAGAGATGATATTGAGAACTCTTTAAAAG
ATGACGTAACAACATTGATGGTATTGAATGTGGTCACTCTGGTCATTTTT
GTCCTCTTCATCTTCATGTTCGCGTTGGTGACGTATCGTAGACGACACAT
TTCATCGGAACCTTAACCGTCCATTTTTGCAAATGGAAATTTATAATAAA
GTGTTTTTATGTGAATGTCTTATATATGAATCGCATATATTTACAAACAA
GTTTTGGAAGAATTTTAAAGAACTAGACTTATTTTTTTAGTGTACCGTTG
TTGATTATTTAAAAGTTCATTATATAGAATTAACCAATAATTTTGAAGTT
GTGGAAAATATTACAAAGGTG Coding sequence (CDS) from alignment at sc0000102_pilon:293087..295957- >MSTRG.13086.1.p1 ID=MSTRG.13086.1.p1|Name=MSTRG.13086.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2535bp|location=Sequence derived from alignment at sc0000102_pilon:293087..295957- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACGGTCAAGTTGATGAAGTTGGATCTCATACCTCTGGTAATGCTACT
CATTGTAGCACCAGTCTCCAGCTCTGAATCTAACATCGGAAATTGTTCGT
GTGAATATGGTGAATATTGCTATAAACCTTTTACTCTAAAACAGCCCACC
AATGGGTATATTGATCGTGGAGAGTGCACTTATGGTCAAATATGCGATTG
CAGTCATCGGAATATGACGCAAATTCCTTCAAACATTCCGATCCATAATC
TAGTATCGCTCAACTTGGCAAACAACTATATTACCACTGTAAGCGATCAA
CTCATCTCAAAGTTTACCAAATTGAGATATTTGGATTTGACCAGTAACCC
GATCACAGAAAGAAAGATATTCAAAGAACCGTTACCAGCGCTTTTCGAGC
TTCGACTCCAATCAGGATCCTTGGACACTGCTTCACTGAATGGATTTCAT
TTGTTAAGAAAATTGGTTATTCATGGCGATAACACTTTGACCAACATCAA
TATGAAGGTATTAAGTGAATTAAAACAACTAGAACAGCTGGAAGTTCTTT
ACACCAACCTGACAACGCTCCCTACATTTTTTATGGATGGATTTTATAGA
CTTAAGAAACTTGAATTCAAAGGTAACAAGAACCTGGAAACTATTGGATT
CGAAGCCATTCAGAATACTCCAAATCTATTACAGCTCATCTTAAAGGACA
ACAATTTGAAAAAACTTACTGGCCCAATCACCAAGAACGCAAGGCTTTTA
GCAGATCTAGATCTCAGCTTTAATCAGCTCTCCACCATCAATGAAGAAAT
GCTTCAAGGTTTTAAAAGTCTTGAGAAATTGGATTTATCAAATAATGGAA
TACGTTTGACATCGTCCTTGTCAAAAAGTGCCCTTGCAAGATTACCGAAG
AAGAAATTAAAGGAACTGCGTCTAAACAATAACTTGATAAATCGACTGCC
GCGTGGTTTTTTTGGAAATAGTGAGCACTTAAGTATTTTGGATCTCAGCT
TCAATAACTTCAAAAGCTTAAACACAACTAACTTCAAATATTTGCGAAGA
CTTGAAGTCCTCAAATTACAAAATATAGGATCTGATTTGGTTCATTTTGA
ACTTGATCTTCGTCGTTTGTCGTACCTGCGAGAAGTTGACATCTCCAGCA
ACTGCGCTTCGTCTTGGTTAGTGTCCAGATTTTATTTATCCAATGCGAAA
ATTGTGAATATCAGTAACTCGTGTCAAAAAACTTTACCCTCCTTCAATTC
AAAGTACCTTGATTTAAGTTTCAATAACCTTTCCAAAGTTGTACTTGACT
TTATAAACACTGAAGGGTACGTCAATTTATCTTACAACCAAATCCAAAGC
ATTGAAATCAAGAAGGATTTTAAAACTGTTGATCTTTCCCATAATTTGAT
AGAAGACATAACCGACATTAAGATCAATCCCGATGTTTGGCTTGGAAATT
TGAACTGCAGTCATAATCATCTAACTACGATCAGGAGATTCTCTAATGTC
ATTGAAATCAGTCCAACGGGTCCGTATCATTTACGCCAAGAACAAGGTTT
GGATTTTTCACATAATTCCATTCAGCATATCGATCTCGATGCGTTCAGTG
CTTTTTCTCAACTCCGCTATTTGAATCTCAAAGGAAACAAACTTAATGAC
TCATTGCGTTTGGAACTCTCCAATAAACTGAAAACGATAAATCTCGGGAC
AAATAGTTTTACTAAGGTGCCTACCTTTTTCCCGAGCTTGATAGATTTGG
TAACTATTGATTTATCGGGAAACTCGCTTAAGGAAGTAACCGAAAACTCG
TTCAACGGATTCAACAAACTTCGTAATCTGAACTTACGAAATACCAACCT
TACAGACTTACCGAAAAATTTCTTGAGATATAATACTGAGAAAATAAGCG
GTGTGTTGGATTTATCAAATAATGATTTTCGGTGCAGTTGTAACGTTTTA
TCTGCAATCAAACAAGTCACAAGAGAAGCTACCGTTATCGGTGATTGTCG
CTCTAATGCTACAAACGACCTCCAAAAGTTGAGCGATCGAGCTTCTATGT
TTATCATTGGCGGAAAGATTGGGTGTGATGTTTGTTCGCAAGACCCGTGT
CGGAATTTTGGTAAATGTGTGCAAGATAAAAATGGAGCGAGATGTTCATG
TTTTTTTACATATACCGGTACATTGTGTGAAAAAAGGGAACACGATACAA
CCGGACGACCTTTCCTTGTTACTACTGAAGAACACGATCGTACATATAAC
ACTGAAACACTTTCGAACCATACTACGGATAATTATCATCCAACACGAAC
TGACGATTACCAAGGAGACAACAACTCTACAACTTCTGGCGGCGCACCCA
CAACCACTTTAACACCTGGCAGAGGGGAGAACGAGGGGCAGAGAGATGAT
ATTGAGAACTCTTTAAAAGATGACGTAACAACATTGATGGTATTGAATGT
GGTCACTCTGGTCATTTTTGTCCTCTTCATCTTCATGTTCGCGTTGGTGA
CGTATCGTAGACGACACATTTCATCGGAACCTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000102_pilon | genome | sc0000102_pilon:293087..295957 - |
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