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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000102_pilon:148907..155353+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13077.4.p1 ID=MSTRG.13077.4.p1|Name=MSTRG.13077.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6447bp|location=Sequence derived from alignment at sc0000102_pilon:148907..155353+ (Clytia hemisphaerica_ch_hm2_pilon)
GCTGCCGCTTAGCTAGCAAGCATtcattttgctttgtaacgtagAAAACA
TTTTAACATACAATACATGCGAAACTAGCGCGGGAACTTCCCGGACCATT
TATAGAATTTATgcagagaaaaaaaaagtgtgtgttTATTTGACCGTGTA
TCGATTGTTTATCAGATCAAATTTGATGGTTCTTCTAATCGGACGGTTTT
TTGGAAGTCTGAAATTGTGAGAAAATATAGGCataagagaaaaacaacaa
aacaattataGTGGAAAAGGTGACTCAATCTCGATTGAAAACTGTGACGA
ATTTGTAGTAACATTTTGGCACACtttattcaaaaagtttttgggatTTT
GAATATtacgaaaacaaagaaatagagAGATGGCACCTATTGATTATGAC
TTTACAATGAAAAATGAGTTTTTGGACATGGGGTTTCTGTGTAAACTTTT
GAATGGTAGATCAAGCTCTACGTCTTCATCTCTACCATCACCACCAGCAC
CTAGTTCAATTCATTTGGGAAGTCCTTACATGCAAAGAACATATAGTAAA
CTATCATCTATATCTTCAACTAGAACTGAACTAGGATCCTATATAGATTC
AGGAGCATATGGTCCTTACAGTCAAGGTTCTACTGGCAGCCCCAGTACCC
CCTCTGATGTAGAGATGAGCTCTTATATGGATGCTAGAAGATATGGCAGC
TATACCGAAAGGTCTACTGGTAGCCCTGGTACTCGATCAGAAAGTGGAGA
TTCTGTTTTCTCTCCttatgaagaagaagaaaatgaagatgaaacaGAAT
ATTTCCAAGATAATGATAACGATAGTTTTTGTGATGATGTCTTGAATGAA
ATTATGTTTTCACCTTCTGGTGAAGTTGATGTTATGcatcagaaattctt
tgaagATAGTTTGTTTAAAAATGGTACGTTCATTGTGGGCTTTTTTATGT
TTAGATCATATCAATTGGTCTAGTCCTGTTTGAAAGTTTGGGTGTGTCCC
ATAGAGACTTTTCATTGTACTTTAGATCCTTAAAGACCAATAAACAATTC
AGACAACCACCATGTCAATGACTGAGTTATGTTCGCCACCTACTCGATGA
ACGACACCACTTGTTAAAGAATTTCTACCCAATTTGAAATCTTAATCCAT
CATAAACAACAGGAGTATCCATCTCTATTTATGATTCCTTCTTCAATTCA
TTACCACTGAAAGTTCAAACAGTTTcattcaatagaaaaataatttttca
tttcaatttagAATTCGATGATAACCAAGCCACATTGAACTTACCAAACC
AACCAGGGGAGAACAGCAACCTTCAACAACAACAGATAGCATCATCACCA
CCATCGGTACAAACCAATACAATCTACCACTTCCCAGCAGACACCAAAGA
AGGTAAGATTAtatcaaagtaaaaattttaagaatgtaATAAACATTATA
TGTAAGCAAGATTAGTTACAATGGTAGGAAAggtttcaatttaatttcat
tttaagttttgaattaTTCTGAACTAAGAGAAAATCACTAGATTACCAGT
GTTCTGCTAAGATCTAACCAGTTCATttcttttcaacattttgaatattc
taacacccctgtctcatagccccggCCGAACTCTTTTCCTCAAtggggaa
aaaaattattgttccaaccttaaaaaatccagtgcgatggttttggagtg
caattcttaaacattgaatttcgagtggggctgagtggggatgaaatcga
tttcaattttccagtggggctgaaattccagggtattttcccaccgggga
cgaattttttgctaaattttccagtggggctggggtcccagcgagTCTGT
GACACAGTGTTGTATTCCAATAATTTTCTCAAAGGTATAATCCCCAAGCC
AACACCACCatcaaacaacaacaacgacagtGAAAGCACCAATCTATCCA
CAAGTCGAACTTCGAAAAGAATGCAACAAAAATCATATTCAACATTAAAA
ACGAATTCAAAACAGAATCCTGGCAAGAAGAACAAACGAAGAAGACGAAA
AAATCTTTGTAAGTTGACTTTCTATGGTAGTAACTGGACATTATAATGTC
AACAATTAATCTATAAAGTTTTAAGTTATGGTGGGTCGGTTGAAAACGTT
GGGTCATTTGGCACCCAAATCTGGGTGCCTAATAGTTATTATGGTGTGTT
TGCCAATAATGTTCAAATTCCAATTTTCCTCAGCTTATATAGACCTGACC
AACCCTATTTAATGTTTTATGGTTGTCTGGTGTATATATTATGGAAGCTT
ACATATTAATGGGATTAGAAAGGTTCTAGTTTTTTAAGGCTGGGAATTTT
AGCTTTATTTATCTTAGCCTAATATTCAAATAGGGATCAGCTATTTAATT
TTGTTGTGTTCTATGAAAGATTGTTTGCTATACAGATGAATGacttttta
gtcaaattttagAATTTAGGCTTGTGAGATAACGCTACATCATTTTCGCG
GCTGTTTAAAAGTGTGTGAAGGAATAACAAATGCCAGTTTAATTAAAggg
atatttttaaaaagaatggGCAGTATTATAAACCTCTTCGAAAAGATgct
ttttgaggatttttgagattttttgagcGGTTGGGTATTACACCTCTTTC
CTTCTGTGAATTTTTAAACAATCTTTCGAgatggattttcaaaaaatcaa
aaattgatttgacGAAAATGCAAAATACTGTCAATGGATTCGGTATTTGA
TTTAGTCTGGAAAATCATCGAAATGATATAGCGTGATCCTTAACATTCTC
ACGAAAGGATTTATATAGCATTTTATAGGATCTATAAACTAAAAGCAAAG
GAACTTAAAGCCGACATTTCTATTCTAATTctctttatcaacatttttat
ttACGTCATTCTTGTAAACGTTTAATGAATgctttttgtacaaaaaatac
cTCTGTTTCAGACAAGCTGAGAGAACTGATAGCAAATGCTGAAAGCcttt
atttaataattctagttttaagcttttaagtttcagcattttatcttttt
ataactttagaaaccatttttaagtTGACTTCTAACCGTTCGTTAAGAAG
TAATTTGAATTTTCATGCGATATTTTCATACGAAAAGTAAGAGAATTAGG
AGCAAAAGAAACACTTCTAGAGCACATTAATAATTGTAATAGTAACTCTA
AACTTTAACTAGTAAATaattttggtccgttattttttttgtcaattacA
GGTTTAAAATTAGAGTTACTGAACTAAAATTACCGCGGGGTCACTTGAGA
AACACTTGGAAGAGGTGCCTATAAAAAGATCAAGGTTAAAATActgtaca
cccccttctcacagatccggtaggGTTTTTCATCTAGCGGGGGTGGAAAT
AACGGACTGTATTCATGATTCATGCAAATTTGAACAAGACAAaagttgtt
taaaattttccactactggcaaaaaccggggtctctccgtagaaaacatt
acatcatgaatatcatgaattaaacttctttaaatattttgtgaattttt
aaaCAATCTTTAGAGAgatggattttcaaaaaatcgaagcCCATAAAAAG
ATCAAGGTTAAAATActgtacacccccttctcacagacccggtagggttT
TTCATCTAGCGGGGGTggaaataacggactgaaattcGATGGGGTTTGAT
ACTCCCATGTTTTTCATGGCTGGGATTTCATTGTTtataagtcagaaaat
tcaatggggatgtAAAAATAGAGCGCAATTTTCTACAGTGAGTAtttgtt
tctttgattttttcatagGGGACACAAAGTGGAGTACAATTTCCACTGGT
GATAATATTTATAGGCcatttttttccagtgggagcCACCGGGTTTGTAA
GAAGGGGATGTGGCCGTTGATAAATCTTTTTAGGTTGGGCCACTTCCTTC
AATGTGAAATATTATGTGTGTTTCAATTGTCAGAtgtttttgatagaatt
tatttttcaattgcaAGCAGCCACGtcgcttttttcttttttaatgtcaa
GAATTTCAGTCATACTTCGGGGTCACAAAAATGTTGTTTCTCTCACAGAT
TTGagtttctaataaagaatataattacaaagtgcgtttttcactatttt
tcttACAATTTGATTGTCACAAAtgtaaattttcttataaaaaactaaaa
gCTCACAGCATAGTTTCCACCTACGCCATTTTTCCTCTCTCATttcaaaa
atgactttttcaaaCGATTTTGGCCGGAATCCATTTGTTATCCGAAATGA
AACCACACTAGCTTACAAAAGCAATGAAAAAATGGGGACAATTTTTCAGT
CTATTTATGACTCACGCATACCTCAAATACAATTAAAGTTTTACTGACTA
CAAAATGATTTCATAAGAAACTATACTATCACGGTCGCATTGTAAAAGAC
TTGATTGTCAAGTAGGTATAGGCTAGCAGCGGTGAGAGAAAATTCTTTTA
AGAAAGAGAGCTTTATGAATGGCTTTCTTGTCCAATATGTTTGTGCAGTA
ATCACTCGCTTGAAGTTTCGCTGTACTGAAAACGGAGAACAGAGATAACT
GATTAAGGGTTTTATCTACTAGTATGCAATCTCCAGCTGTTCGTACTTTT
ATATAATTATGAAAAGATAGGATGAGGGGGTGTAAGACTTGAGAGCTTGA
TAATGATGATAATAATGATTTTTGGTAACTCCTTTGGTACGTGACCTTTA
TCAATGTCTTTctaactggcacacaacgttgtttcaacgatCATCTAACG
TCCATTTCGTCGTGCTTTTAACGTTTCATGATAAACATCGGAGCAACGTT
GCGCGAGTCGATATTTTGCGTTGCTAGCCGAGTTATCTAGAATCTTTAGA
CATCGTATCGCTTATTAGCcaatttcataggattcgtgtatCTGTTATAT
GCTTTTTTCTATGCAATTTAAAgggggggTGTACAAATTAGTGCAGATTT
CCCCAGACTTCCTTTTGAGAGATTGATTGTATGTCATCATTCAAATCATT
CAATCGACTTGGGACCTCGTGAACTCTTTTCTAGTGTAAAAAGTTGATTA
CTTCATTGACgtagaaaaatatcatgtacccaaaacacgaatcctatggA
ATAGTTTAATTTTTACGAACAGAACATATCATTGAAAGCAGCGAGGACTC
GCACCTGGTATGTGGCGCTGTAGCCTAGACCACTCGGCCGTCGCTTCGTA
TGTAAGAATGGACAAATTAACCATTAAAGCGTGAagagactgggttcgag
tttaccaagaaggaatgacgtcaaaatatcTGAAGTCGTCGTGTAACAGT
TATcagcgaggttaagcacgggtttattttgaccgtaaagtgcgataccg
taggcctttacataacttgccaaagcaaaccatgcgagtgaaatcttatg
tagaGGCCTACGATATCGCATTGGGtggtctaaataaacacttgcttaac
ctcgctatcaACCTCATAGTCAaataattttgacgtcattcccttataaa
ttcattaccagtTTACTCAAAGACAATCGCGCCGTGCAATAAAAGACAGT
TTCTGTTTCTCTAATtcctttctctaatttgaattAACCAAACttgtatt
ttatatattttttcttttgtttatttctagTGAAGCCAGGTAGTCAACTC
TACCAATTCATCCTGCAATTACTGGACGATGAAAGCAAACGAGAACTCAT
TCGATGGGAAAAGCCTAGAAGCACGGGTATCTTCCGAATCATCAATAAAG
AGCAGGTTTCCCAGCTATGGGGAGACGCGCGCAAAAGGACGATGACGTAC
GACAGTCTGAGCCGTGGATTACGTCATTATTACAGTCAAGGGTTACTGAA
TGCTGttaacaaaaaattgcattATCAATTTACCCAGAAAGCTTTGGACG
AGTGGGAAGTTATAAGACATAAAGATTTAATAGAAGAGAGATAAATCTGT
CTGGGTCTGTCTTTGtagtaaaatttcttttgtaacaTATTTCATGTTTG
AGTGAGCCGTGTGTGTGTCCCTGAGTGTTAATAGCAGACGTATAGAGAGT
ACCTTGAaggcttttttcatttttttttgccttttttagaatattatttt
ctttaaattcaaatcTTCATCTCTTTTGATAAAGTATATATAGGTTAAAA
TTGCTTCTGAAGTTCTGATTTggaataaaacaaaattttaaagacccCCC
TCTTTGCTACCTTTCTATAGACTTTGCATTCATTTAATAACAATTTTAAT
AACATACAAAGTTACATAAATTTTCAGTTACCTTTCCTCttgtaaataaa
ttattttaaaaaacccaaatttttgtaaatatttccaCAACATAATATTT
TAACGCattttttaatagttttcaTGAAAAGGTCATACATTGTAGAA Coding sequence (CDS) from alignment at sc0000102_pilon:148907..155353+ >MSTRG.13077.4.p1 ID=MSTRG.13077.4.p1|Name=MSTRG.13077.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4692bp|location=Sequence derived from alignment at sc0000102_pilon:148907..155353+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCACCTATTGATTATGACTTTACAATGAAAAATGAGTTTTTGGACAT
GGGGTTTCTGTGTAAACTTTTGAATGGTAGATCAAGCTCTACGTCTTCAT
CTCTACCATCACCACCAGCACCTAGTTCAATTCATTTGGGAAGTCCTTAC
ATGCAAAGAACATATAGTAAACTATCATCTATATCTTCAACTAGAACTGA
ACTAGGATCCTATATAGATTCAGGAGCATATGGTCCTTACAGTCAAGGTT
CTACTGGCAGCCCCAGTACCCCCTCTGATGTAGAGATGAGCTCTTATATG
GATGCTAGAAGATATGGCAGCTATACCGAAAGGTCTACTGGTAGCCCTGG
TACTCGATCAGAAAGTGGAGATTCTGTTTTCTCTCCttatgaagaagaag
aaaatgaagatgaaacaGAATATTTCCAAGATAATGATAACGATAGTTTT
TGTGATGATGTCTTGAATGAAATTATGTTTTCACCTTCTGGTGAAGTTGA
TGTTATGcatcagaaattctttgaagATAGTTTGTTTAAAAATGAATTCG
ATGATAACCAAGCCACATTGAACTTACCAAACCAACCAGGGGAGAACAGC
AACCTTCAACAACAACAGATAGCATCATCACCACCATCGGTACAAACCAA
TACAATCTACCACTTCCCAGCAGACACCAAAGAAGGTATAATCCCCAAGC
CAACACCACCatcaaacaacaacaacgacagtGAAAGCACCAATCTATCC
ACAAGTCGAACTTCGAAAAGAATGCAACAAAAATCATATTCAACATTAAA
AACGAATTCAAAACAGAATCCTGGCAAGAAGAACAAACGAAGAAGACGAA
AAAATCTTTTGAAGCCAGGTAGTCAACTCTACCAATTCATCCTGCAATTA
CTGGACGATGAAAGCAAACGAGAACTCATTCGATGGGAAAAGCCTAGAAG
CACGGGTATCTTCCGAATCATCAATAAAGAGCAGGTTTCCCAGCTATGGG
GAGACGCGCGCAAAAGGACGATGACGTACGACAGTCTGAGCCGTGGATTA
CGTCATTATTACAGTCAAGGGTTACTGAATGCTGttaacaaaaaattgca
ttATCAATTTACCCAGAAAGCTTTGGACGAGTGGGAAGTTATAAGACATA
AAGATTTAATAGAAGAGAGATAAATGGCACCTATTGATTATGACTTTACA
ATGAAAAATGAGTTTTTGGACATGGGGTTTCTGTGTAAACTTTTGAATGG
TAGATCAAGCTCTACGTCTTCATCTCTACCATCACCACCAGCACCTAGTT
CAATTCATTTGGGAAGTCCTTACATGCAAAGAACATATAGTAAACTATCA
TCTATATCTTCAACTAGAACTGAACTAGGATCCTATATAGATTCAGGAGC
ATATGGTCCTTACAGTCAAGGTTCTACTGGCAGCCCCAGTACCCCCTCTG
ATGTAGAGATGAGCTCTTATATGGATGCTAGAAGATATGGCAGCTATACC
GAAAGGTCTACTGGTAGCCCTGGTACTCGATCAGAAAGTGGAGATTCTGT
TTTCTCTCCttatgaagaagaagaaaatgaagatgaaacaGAATATTTCC
AAGATAATGATAACGATAGTTTTTGTGATGATGTCTTGAATGAAATTATG
TTTTCACCTTCTGGTGAAGTTGATGTTATGcatcagaaattctttgaagA
TAGTTTGTTTAAAAATGAATTCGATGATAACCAAGCCACATTGAACTTAC
CAAACCAACCAGGGGAGAACAGCAACCTTCAACAACAACAGATAGCATCA
TCACCACCATCGGTACAAACCAATACAATCTACCACTTCCCAGCAGACAC
CAAAGAAGGTATAATCCCCAAGCCAACACCACCatcaaacaacaacaacg
acagtGAAAGCACCAATCTATCCACAAGTCGAACTTCGAAAAGAATGCAA
CAAAAATCATATTCAACATTAAAAACGAATTCAAAACAGAATCCTGGCAA
GAAGAACAAACGAAGAAGACGAAAAAATCTTTTGAAGCCAGGTAGTCAAC
TCTACCAATTCATCCTGCAATTACTGGACGATGAAAGCAAACGAGAACTC
ATTCGATGGGAAAAGCCTAGAAGCACGGGTATCTTCCGAATCATCAATAA
AGAGCAGGTTTCCCAGCTATGGGGAGACGCGCGCAAAAGGACGATGACGT
ACGACAGTCTGAGCCGTGGATTACGTCATTATTACAGTCAAGGGTTACTG
AATGCTGttaacaaaaaattgcattATCAATTTACCCAGAAAGCTTTGGA
CGAGTGGGAAGTTATAAGACATAAAGATTTAATAGAAGAGAGATAAATGG
CACCTATTGATTATGACTTTACAATGAAAAATGAGTTTTTGGACATGGGG
TTTCTGTGTAAACTTTTGAATGGTAGATCAAGCTCTACGTCTTCATCTCT
ACCATCACCACCAGCACCTAGTTCAATTCATTTGGGAAGTCCTTACATGC
AAAGAACATATAGTAAACTATCATCTATATCTTCAACTAGAACTGAACTA
GGATCCTATATAGATTCAGGAGCATATGGTCCTTACAGTCAAGGTTCTAC
TGGCAGCCCCAGTACCCCCTCTGATGTAGAGATGAGCTCTTATATGGATG
CTAGAAGATATGGCAGCTATACCGAAAGGTCTACTGGTAGCCCTGGTACT
CGATCAGAAAGTGGAGATTCTGTTTTCTCTCCttatgaagaagaagaaaa
tgaagatgaaacaGAATATTTCCAAGATAATGATAACGATAGTTTTTGTG
ATGATGTCTTGAATGAAATTATGTTTTCACCTTCTGGTGAAGTTGATGTT
ATGcatcagaaattctttgaagATAGTTTGTTTAAAAATGAATTCGATGA
TAACCAAGCCACATTGAACTTACCAAACCAACCAGGGGAGAACAGCAACC
TTCAACAACAACAGATAGCATCATCACCACCATCGGTACAAACCAATACA
ATCTACCACTTCCCAGCAGACACCAAAGAAGGTATAATCCCCAAGCCAAC
ACCACCatcaaacaacaacaacgacagtGAAAGCACCAATCTATCCACAA
GTCGAACTTCGAAAAGAATGCAACAAAAATCATATTCAACATTAAAAACG
AATTCAAAACAGAATCCTGGCAAGAAGAACAAACGAAGAAGACGAAAAAA
TCTTTTGAAGCCAGGTAGTCAACTCTACCAATTCATCCTGCAATTACTGG
ACGATGAAAGCAAACGAGAACTCATTCGATGGGAAAAGCCTAGAAGCACG
GGTATCTTCCGAATCATCAATAAAGAGCAGGTTTCCCAGCTATGGGGAGA
CGCGCGCAAAAGGACGATGACGTACGACAGTCTGAGCCGTGGATTACGTC
ATTATTACAGTCAAGGGTTACTGAATGCTGttaacaaaaaattgcattAT
CAATTTACCCAGAAAGCTTTGGACGAGTGGGAAGTTATAAGACATAAAGA
TTTAATAGAAGAGAGATAAATGGCACCTATTGATTATGACTTTACAATGA
AAAATGAGTTTTTGGACATGGGGTTTCTGTGTAAACTTTTGAATGGTAGA
TCAAGCTCTACGTCTTCATCTCTACCATCACCACCAGCACCTAGTTCAAT
TCATTTGGGAAGTCCTTACATGCAAAGAACATATAGTAAACTATCATCTA
TATCTTCAACTAGAACTGAACTAGGATCCTATATAGATTCAGGAGCATAT
GGTCCTTACAGTCAAGGTTCTACTGGCAGCCCCAGTACCCCCTCTGATGT
AGAGATGAGCTCTTATATGGATGCTAGAAGATATGGCAGCTATACCGAAA
GGTCTACTGGTAGCCCTGGTACTCGATCAGAAAGTGGAGATTCTGTTTTC
TCTCCttatgaagaagaagaaaatgaagatgaaacaGAATATTTCCAAGA
TAATGATAACGATAGTTTTTGTGATGATGTCTTGAATGAAATTATGTTTT
CACCTTCTGGTGAAGTTGATGTTATGcatcagaaattctttgaagATAGT
TTGTTTAAAAATGAATTCGATGATAACCAAGCCACATTGAACTTACCAAA
CCAACCAGGGGAGAACAGCAACCTTCAACAACAACAGATAGCATCATCAC
CACCATCGGTACAAACCAATACAATCTACCACTTCCCAGCAGACACCAAA
GAAGGTATAATCCCCAAGCCAACACCACCatcaaacaacaacaacgacag
tGAAAGCACCAATCTATCCACAAGTCGAACTTCGAAAAGAATGCAACAAA
AATCATATTCAACATTAAAAACGAATTCAAAACAGAATCCTGGCAAGAAG
AACAAACGAAGAAGACGAAAAAATCTTTTGAAGCCAGGTAGTCAACTCTA
CCAATTCATCCTGCAATTACTGGACGATGAAAGCAAACGAGAACTCATTC
GATGGGAAAAGCCTAGAAGCACGGGTATCTTCCGAATCATCAATAAAGAG
CAGGTTTCCCAGCTATGGGGAGACGCGCGCAAAAGGACGATGACGTACGA
CAGTCTGAGCCGTGGATTACGTCATTATTACAGTCAAGGGTTACTGAATG
CTGttaacaaaaaattgcattATCAATTTACCCAGAAAGCTTTGGACGAG
TGGGAAGTTATAAGACATAAAGATTTAATAGAAGAGAGATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000102_pilon | genome | sc0000102_pilon:148907..155353 + |
|
