MSTRG.13064.1.p1 (mRNA) -

Overview
NameMSTRG.13064.1.p1
Unique NameMSTRG.13064.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000101_pilon:1124909..1126883+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.13064.1.p1 ID=MSTRG.13064.1.p1|Name=MSTRG.13064.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1975bp|location=Sequence derived from alignment at sc0000101_pilon:1124909..1126883+ (Clytia hemisphaerica_ch_hm2_pilon)
CTCCAATCAAAGAAGGTTTTCCAATCGAGTGTGGTGTACCACTTGGTTTC TTCAGTTTATTTACCAAGAGTCCCATATCATTTCAGAAGGCTTCCTTTTC AAATTGCAAGCAAGGCGTCTGTTGCTGTCTACCGTTTGCGCGTTTGCATC GTAAGTCCTCCTAAAATCAGCGTTTGCTTAGACTAAAACTAGCGCTTCTG AAATGAAATATGCTTTTAGGGATGACTACTTAATCGTATTGTTTCTTTCA TTTGTAGTCTTTCTGGTAGCTAGCCAGTTCAATGCTTATTACTTGTACTT TCTGCTGATCATGAACTTATGGGGTTATTTTCTTCCCAAACTATTAGGTG TTTCTACCTTTCCTTTCTAAATGAAAAGTGTTCTTCTTtcttaccgtaag ttggtctaatatcaacatccctcgtctaattctgacacccttctcttctt tagagacaggaataatatgaaagtttgaatcactgactgaaaaaggatta tagacctttttttaaagaggcagccatgttgaataattatgtactccagc ataaaaacaatgatacagctatgcataattactgtatcgtgcatatttta aaaattatccatggctgtatcattgtttttatgctggagtacataattat tcaacatgactgcctcttttaaaaaaggtctattcctccctaaccactaa gcaaagaaaatttttttgatctttctatgaatttcagctgataaaaagtg TGTCGGTAGATAGAGGGAtttcgacattagaccaagtaaCGGTAGTAGAT AAATCGACTTTAAGTACTGCATTAAGCGTTGTTTATTGACActcattttg tttcttttacaGCGCTATTACTGCACATAGGTTGCTGCAATTTGCTGCTT CTTGCTTGCTAATACAAATTTCACTGCAAAGATCTTGCTGCTAATCGCGT ATCCCAAAGGCAGCACATGGTACTGTTTGAAATGGACGGCCAAAAGAATA ATGAGTGTAGAGATTTTTTAAGAGGTGTCTGTAATCGAGGAAGCTCTTGC AAGTTTTTCCATCCGCCAGATGCAAATATAATAAAGAAAGAGAACAAGCT TCCTATTTGCAAggactttcaaaacaaaggctgcgAGAGAAAAATGTGTA AATTTTTGCATATTTCACAACAAGAGGAGGAGGAGTATAATGCTTCTGGT ATTCTTCCTGCACATGGCGGTCGGCCTGACAAAGTGCGATCATTAGGAAT GCCTGGCGGTAGAGGAGGAGGCCCTAGGCCTATGCACCCTCCAGCTTCTG ATGCGTGCAAAGATTTTATGAACGGTGTTTGCAATCGCGGTAATCGATGT AAATTCAGTCATATTAATGAGGAAAGTCCAAATTATGGCAAAAGGAGACG TAACGATTTTGGGGGTCCAGGTGAGTACATGGGTGGTGGTCAAGGCCAAG GACATCTCGCGGAAGATAATGAAATGCTACGACGTAAAATTTCAGATTTG CAAAGACAAGTTATAGACTTACGACAAATGAATGACACTCTCTATGAGCA AAATAGCAAATACAGATTGCAATTGCGAGGAGGTCCAGGAACAGCTCCTC CACCAGCAACAGGCCAGGGTGCTAACCCTGCTTATGGCAGCGGGTCTTTC GCAGGTCCTGCAGCTACAGGAGGGGGTAATCAATATTCATCGTTTGATGG CTACTCTAAATTTTAGCTTGAACAATATGatattgtttttgtaaatattg tCTCAATTTCATGCTAAGATTTTCATAATTAGAACTTTATGATTTTTACT AggaattttatgtttttataagagctAACAAGAAAATTGATTACTTGGTC TCAATTTAATTCCTAAGCTTGATGGACTGACTACCTGCTTTCACTTTTTA TGAACCTTaacattcatttttaaatttagtgaggtctgttagcacaaaaa tacttcagatggtgattaaagcatg

Coding sequence (CDS) from alignment at sc0000101_pilon:1124909..1126883+

>MSTRG.13064.1.p1 ID=MSTRG.13064.1.p1|Name=MSTRG.13064.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=750bp|location=Sequence derived from alignment at sc0000101_pilon:1124909..1126883+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTACTGTTTGAAATGGACGGCCAAAAGAATAATGAGTGTAGAGATTT
TTTAAGAGGTGTCTGTAATCGAGGAAGCTCTTGCAAGTTTTTCCATCCGC
CAGATGCAAATATAATAAAGAAAGAGAACAAGCTTCCTATTTGCAAggac
tttcaaaacaaaggctgcgAGAGAAAAATGTGTAAATTTTTGCATATTTC
ACAACAAGAGGAGGAGGAGTATAATGCTTCTGGTATTCTTCCTGCACATG
GCGGTCGGCCTGACAAAGTGCGATCATTAGGAATGCCTGGCGGTAGAGGA
GGAGGCCCTAGGCCTATGCACCCTCCAGCTTCTGATGCGTGCAAAGATTT
TATGAACGGTGTTTGCAATCGCGGTAATCGATGTAAATTCAGTCATATTA
ATGAGGAAAGTCCAAATTATGGCAAAAGGAGACGTAACGATTTTGGGGGT
CCAGGTGAGTACATGGGTGGTGGTCAAGGCCAAGGACATCTCGCGGAAGA
TAATGAAATGCTACGACGTAAAATTTCAGATTTGCAAAGACAAGTTATAG
ACTTACGACAAATGAATGACACTCTCTATGAGCAAAATAGCAAATACAGA
TTGCAATTGCGAGGAGGTCCAGGAACAGCTCCTCCACCAGCAACAGGCCA
GGGTGCTAACCCTGCTTATGGCAGCGGGTCTTTCGCAGGTCCTGCAGCTA
CAGGAGGGGGTAATCAATATTCATCGTTTGATGGCTACTCTAAATTTTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.13064MSTRG.13064Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13064.1.p1MSTRG.13064.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13064.1.p1.exon1MSTRG.13064.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13064.1.p1.exon2MSTRG.13064.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000101_pilongenomesc0000101_pilon:1124909..1126883 +