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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000101_pilon:1114720..1119404- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13063.1.p1 ID=MSTRG.13063.1.p1|Name=MSTRG.13063.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4685bp|location=Sequence derived from alignment at sc0000101_pilon:1114720..1119404- (Clytia hemisphaerica_ch_hm2_pilon)
TTTCAGCATTAGATAATGCTGATTGCCAATGACATAATATACCTACAAAT
AAATCATGTTGGAGAATGAGTTGAACGGCTACCAAAAGCATTTCTACAAA
TCGAATGGATGTAAGAAGGCATTGATTCAACAAATCTCCAAGGTGAATAA
AGGCTCCAAAGTGAAATGCAGTACGGAATCACTATCTGACCCTGCGAAAG
TTATTAACTTCATTAACGGTCATCAGATTAGAGACTTGCATCGTATAGCT
AAGAATAACAAAACAAGGAAAGCTGATGATGTCAAAGCTTCCAATATTAT
AGTTCCATCAAATGAGAAGATCATGAGGAAATTGACTAAGGGAAAAGAAC
AGATATCATGCAAATGTCCTAACGGGTTCAAAAGAGTTAATAAAACAGCT
CAAATCAATGGAGGATGTTTAAATCAGTCTTGCAAGAGACAAACTCATTT
GTCACCAATAAAAAATGAACGTTCCAAACCAAGAGTAGAGAAGAATAATC
ATCGAAAAAAGAACATAAATGATCCTGAAGATGATAAGCCGAAAGAATAT
GTCCTTAGATCTTCTCAGCGCCTTCAGTATATCCACAACATGAAGAAAAG
GGACATTGAAATCGACAAACCATTAGTGGATAGGATGACAAATATGTTCA
ATGAACCAATAGACATTAGATTAGATACAAAAAAGCTGAATATTCCTGTG
TTAAACAACAATCCTCAATCTAGAGTAAATTGTGAATGGGGCGATTGTAG
GCTTTCATTTATTAATGCAGAAGACCTTACAGACCATGTTGAATCATCTC
ACTTGGTTAGTTGTGAGGAAAGTGACAACTGTAGTTGTATGTGGAGAGAT
TGCAAGTTTTTGAATCAATCGTGTTCTTTTAAATGGCTATCAAAGCATGT
TTTACGTCATTGCGATTTGAAGCCATTTAAATGTGTTATTCTTGGTTGTG
ATATGACATTTAGTACACAGAATGGACTAGCAAGACATGTCCCAACACAT
TTTAATGAAAGTCGCGTTAGACGTGCTTGTGTCTTAACACATGAAGCAGC
TAGGAAGGAAGAATTAAATAAAACTAAAAGACAATTAAGTGCAACTTTGA
GTACTTGTTCAGAATCAAGTAGTGGTACATTTTGTAGTAGTGGTAGCAGC
AGTCTGGGTGAAGAGATCATTTTTGACAACGCCTCAATACCAAACGTATC
AGTTGGCAAACATACAGATTTTCGTGAAAGTAAGTCCGAAGCATTTCTCA
TAAAGATGGAATTTCGCTTTATTATTGTTTGTTCTCGTTTTACAAAATAA
ATCGCAATAGGCAATCAAAATAATGTCTCCTGGAACAGTGCCATCTGTTT
CTTATTTAATTACTGTTTGTTTTTTGCGATACTACTCAACTCTGCCTGAG
AGATTGTTGACGTCATGAAATTCACTTTTTGCATATTTTTATGTTCTCAG
ATCATCATACGTTCACGACCAAGACATACAATTATGTGAAAAAGAAGATT
CAAAAATCCACCTTTGATCCCTCTACTAATTCTGGATATTTAGATAAAGC
TTTTCGTATTGACCACAAGGTAAGTGTATTTAGAATATTCCTTATGAGAT
TTGGTAGCGTACTGTAGAGAGGTAATTCAAACTTTTTTGTATTGCCAGAA
TTAATTGTTAATTGTTACAGTTAAGAGAGGTAAAATGTATGTGTTTTTTT
TTTGTTCATTATGATAAGAATTAACTTGAGAGATATTTTCGATGCTCTAT
TATGCTTCTAATTCTAAGTGAGTATTGTTTTCCTGAAAAACCAGGAGATT
GAAATTGTATTATTTTTGTTACCTTGGCTCCATTTTTTTCCTTAGGTGAT
AGGAAGGAGGTCCGGCAGTAATGGTATAACCGAAATGTTATTGACCCCTT
CACTCAATAATTTGTGAGTTAGACTTTAATGGTATTCTTGCGCATATTGT
TTTTGCATTCATTTCCAATGTGTTGTTTCTTTCACACCTCTTCATGTCCA
TCATCACTTAAAATGACAGTTTTCAAACAATCTATTGTTTGTAAGTCGTG
AATCAGTCTTTCACCTTGTAACTAACTATAGGGATTTTATGTCTTCAATT
GAGCTCAATTTATTTTTTATTAAATACCTCTGAATACCTAATATAGTTAT
GTTTCCAAAAAGTATTGTAGTGGAAAGTGTAGTAATAAGTAGTTCGTTTG
TCCAAATATAAATTTTGACTCCCTTAGCTGGAAAGAAACGTGCGAGCTTT
TCTAAACCTGAACACCCTCTTTAACCAGTAAGATCATCTTTATTTTTAGA
TTCCCTCGCTCTTCATTCTGGTGTGACAGCAATGAATTTCGAAAACGTAA
ACATTCTCACGTTGAAATCCCGATGAGGGACATGCCGGTCGATATCAAAA
ATAAACTATACGATTCCGAACATGCTTCAAGCATTCGACGTCGCAAGAAA
CGAAAGTGATCCTTTTGAATTTGTGCATCTCGATTTCTTTCAGGAAGCTT
TATGTAAGTTTCCACTCATACATCCTTCTTATAACACCAAGTTCTATCAG
ATAGAGCAAGAATGGCGAAGTCTGGGTTCCCAGTGGTGAGAAAACATCTA
CTAGAGAATAGGCTGCTTTAGAAGAAGTCAGGGAAATTCTTTCCAGGATA
CATTGAATTAAGTGTTTTAGCCAAGCTTATCCGTTTTAATTGACTTTTTC
TCGTCCATTTTGTTAATGTTGGCCAGGAAAAACAGATTCAAAGTTTTTAG
CTTGATTCAGGCAAGAACTACACTTTTATTTGAGAAATGTCAAATAAAGA
AAGGTCGATTTCTTACTAAAAGCCATGGAAAGATTTTCTGTGGCACTACT
GGAAACCCAGCCTAAAGATGCTATTGCATTTTAAAACTTAATGGTTTGTT
TTGTACCATACTCGATTCTGTTAAATTATTTTCCTAGGTAGTGCAATTTT
TCAAGCAATTTATTTAATTTTTCAAGCAATTTATTTCAATTTTTCAATTT
CAAAAATTCCCAATTCAATTTATCCTTAGATAGGTCTATGTTAATTTTTC
TAAAGCATTTTAAACAATGATGATAGTTTCTGTTGAATTTTTCCAATGCT
TAAATTTAGATTTTTAACTAGATATACATTTTCACATTATTTCACTTTTT
CGTAGTGTATTAGTTAGCTATGTGATGGGTTTAGGTTAGATTTTCAGCAT
TTTTAGAATGGTCTTTGATCTAGCCGGGTCATCTGGTTTAAGATGTTTTT
TAGTAAAGTGTCATTTTCTTTTGAAAATTCATTTTTGGTCTTCCCAAGGC
CTATATTAGAATTGCTCAAATAATAATTTAACTTGAAACATCATTTGATT
GATCAAATAAAGCTGGGTGCTTTTGGAGGGATTTAGGTCTTTTTTCACTT
TATCATTCGTCTTGACATCCTATAGAATTGTTCTTGTACCACTTATTTCT
TTCTTATTTTTGTTGCTACATCTTCTTCTAGAATACTTTAATTATATTAC
TGTCCCTTCGCCAGGCCTTCAGTGGTTTGTGTTTTTTTCTCAATTATTTT
TACAGTATTTTAGATAGTTCAAAATTTCAGTCAATTGTTATGACTTATGA
TTTGTGCATTCAAGAATTCAGTTTTTGAATTTAGTATAGTTTCAATACTT
AGATAGGCATATTGAAATCAATGCAACATTAGCACCATTCTTTTTAGCTT
AAAACACTTTTTCTCGTATTGTACTTGAGAGCTATCGAAATCATTTTAGA
CGATGTACGTAATAATTCTTTAATAGCATTAAAGTGAATGCACACGTATG
TTTTTGTTGATTTAAAGTACTGTTTAAGAACTTAGAGCTTAGACTTGGAC
AATACTGCTTCCACTACCTTCGGCAATTCAAGTCTACCTTAATCATAAAA
ACCTTGTTAGAGTTAAAAGTGAAACTTGTGGTGTAGAATTCCTTATATGT
CCTTTTGAGGGTTAGTTATTGTCTATGTCCACATTTAATGAATAATATAA
TATAAATTTATTGTTTCATGTACATATTTTTTTGTATATTCGGATAATAT
TGATATGGTGTATAATTATTTTTTTTGGTTGGTAAATTTAATATTTAAGT
CGGTTGGTTACTCTGCTGTAGGTTTAACAATCTGTGATACTGAGTGTTGT
TGAGTGGCACTGACCACTGACCTTTATAAACGCTATCTTTGATATGAGTT
TTTAGAAAAGCGGTACCCGGAAAGAAACCAGTGCAGTGCTTACAACAATG
GTGCTACATTAATAGTTTTTAATGAAAAGAAATCTAGTGCTCTCGGTGCA
ATTTACACCCACATTGAGAAGTGGTACCACTAAAAACTCCGATCAAAATG
TATGGCTTGGTCGGGTTTTAAAAACTACCTTCAGGGATTATGAACACAAT
AAAGTCAGCAACGTATAAGGGTCAACTCTCGTGTTTTTAATCGCCCCGTG
ACGGCCCGGGTCATTATGAAAACGTATCCTTAGAAATGAGTACGAGCTCG
GACAAGACGAAAATAACTGTTTTTGTTTTCATAAATAGCACTCAAACGAG
AGGAAGTAATCTGAAACCTTTTCTCCTATTTTCTTTCTCCTTTAATCCTT
TAACAGGAAATCTCACAAGTGAGCTCCTAAATAAGATGAGCAAATGTCTG
AAGCCGATCCGCTACAAAGAAATGTCACGATTTCC Coding sequence (CDS) from alignment at sc0000101_pilon:1114720..1119404- >MSTRG.13063.1.p1 ID=MSTRG.13063.1.p1|Name=MSTRG.13063.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=6084bp|location=Sequence derived from alignment at sc0000101_pilon:1114720..1119404- (Clytia hemisphaerica_ch_hm2_pilon)
ATTCCCTCGCTCTTCATTCTGGTGTGACAGCAATGAATTTCGAAAACGTA
AACATTCTCACGTTGAAATCCCGATGAGGGACATGCCGGTCGATATCAAA
AATAAACTATACGATTCCGAACATGCTTCAAGCATTCGACGTCGCAAGAA
ACGAAAGTGAGTGATAGGAAGGAGGTCCGGCAGTAATGGTATAACCGAAA
TGTTATTGACCCCTTCACTCAATAATTTATCATCATACGTTCACGACCAA
GACATACAATTATGTGAAAAAGAAGATTCAAAAATCCACCTTTGATCCCT
CTACTAATTCTGGATATTTAGATAAAGCTTTTCGTATTGACCACAAGATG
TTGGAGAATGAGTTGAACGGCTACCAAAAGCATTTCTACAAATCGAATGG
ATGTAAGAAGGCATTGATTCAACAAATCTCCAAGGTGAATAAAGGCTCCA
AAGTGAAATGCAGTACGGAATCACTATCTGACCCTGCGAAAGTTATTAAC
TTCATTAACGGTCATCAGATTAGAGACTTGCATCGTATAGCTAAGAATAA
CAAAACAAGGAAAGCTGATGATGTCAAAGCTTCCAATATTATAGTTCCAT
CAAATGAGAAGATCATGAGGAAATTGACTAAGGGAAAAGAACAGATATCA
TGCAAATGTCCTAACGGGTTCAAAAGAGTTAATAAAACAGCTCAAATCAA
TGGAGGATGTTTAAATCAGTCTTGCAAGAGACAAACTCATTTGTCACCAA
TAAAAAATGAACGTTCCAAACCAAGAGTAGAGAAGAATAATCATCGAAAA
AAGAACATAAATGATCCTGAAGATGATAAGCCGAAAGAATATGTCCTTAG
ATCTTCTCAGCGCCTTCAGTATATCCACAACATGAAGAAAAGGGACATTG
AAATCGACAAACCATTAGTGGATAGGATGACAAATATGTTCAATGAACCA
ATAGACATTAGATTAGATACAAAAAAGCTGAATATTCCTGTGTTAAACAA
CAATCCTCAATCTAGAGTAAATTGTGAATGGGGCGATTGTAGGCTTTCAT
TTATTAATGCAGAAGACCTTACAGACCATGTTGAATCATCTCACTTGGTT
AGTTGTGAGGAAAGTGACAACTGTAGTTGTATGTGGAGAGATTGCAAGTT
TTTGAATCAATCGTGTTCTTTTAAATGGCTATCAAAGCATGTTTTACGTC
ATTGCGATTTGAAGCCATTTAAATGTGTTATTCTTGGTTGTGATATGACA
TTTAGTACACAGAATGGACTAGCAAGACATGTCCCAACACATTTTAATGA
AAGTCGCGTTAGACGTGCTTGTGTCTTAACACATGAAGCAGCTAGGAAGG
AAGAATTAAATAAAACTAAAAGACAATTAAGTGCAACTTTGAGTACTTGT
TCAGAATCAAGTAGTGGTACATTTTGTAGTAGTGGTAGCAGCAGTCTGGG
TGAAGAGATCATTTTTGACAACGCCTCAATACCAAACGTATCAGTTGGCA
AACATACAGATTTTCGTGAAAATTCCCTCGCTCTTCATTCTGGTGTGACA
GCAATGAATTTCGAAAACGTAAACATTCTCACGTTGAAATCCCGATGAGG
GACATGCCGGTCGATATCAAAAATAAACTATACGATTCCGAACATGCTTC
AAGCATTCGACGTCGCAAGAAACGAAAGTGAGTGATAGGAAGGAGGTCCG
GCAGTAATGGTATAACCGAAATGTTATTGACCCCTTCACTCAATAATTTA
TCATCATACGTTCACGACCAAGACATACAATTATGTGAAAAAGAAGATTC
AAAAATCCACCTTTGATCCCTCTACTAATTCTGGATATTTAGATAAAGCT
TTTCGTATTGACCACAAGATGTTGGAGAATGAGTTGAACGGCTACCAAAA
GCATTTCTACAAATCGAATGGATGTAAGAAGGCATTGATTCAACAAATCT
CCAAGGTGAATAAAGGCTCCAAAGTGAAATGCAGTACGGAATCACTATCT
GACCCTGCGAAAGTTATTAACTTCATTAACGGTCATCAGATTAGAGACTT
GCATCGTATAGCTAAGAATAACAAAACAAGGAAAGCTGATGATGTCAAAG
CTTCCAATATTATAGTTCCATCAAATGAGAAGATCATGAGGAAATTGACT
AAGGGAAAAGAACAGATATCATGCAAATGTCCTAACGGGTTCAAAAGAGT
TAATAAAACAGCTCAAATCAATGGAGGATGTTTAAATCAGTCTTGCAAGA
GACAAACTCATTTGTCACCAATAAAAAATGAACGTTCCAAACCAAGAGTA
GAGAAGAATAATCATCGAAAAAAGAACATAAATGATCCTGAAGATGATAA
GCCGAAAGAATATGTCCTTAGATCTTCTCAGCGCCTTCAGTATATCCACA
ACATGAAGAAAAGGGACATTGAAATCGACAAACCATTAGTGGATAGGATG
ACAAATATGTTCAATGAACCAATAGACATTAGATTAGATACAAAAAAGCT
GAATATTCCTGTGTTAAACAACAATCCTCAATCTAGAGTAAATTGTGAAT
GGGGCGATTGTAGGCTTTCATTTATTAATGCAGAAGACCTTACAGACCAT
GTTGAATCATCTCACTTGGTTAGTTGTGAGGAAAGTGACAACTGTAGTTG
TATGTGGAGAGATTGCAAGTTTTTGAATCAATCGTGTTCTTTTAAATGGC
TATCAAAGCATGTTTTACGTCATTGCGATTTGAAGCCATTTAAATGTGTT
ATTCTTGGTTGTGATATGACATTTAGTACACAGAATGGACTAGCAAGACA
TGTCCCAACACATTTTAATGAAAGTCGCGTTAGACGTGCTTGTGTCTTAA
CACATGAAGCAGCTAGGAAGGAAGAATTAAATAAAACTAAAAGACAATTA
AGTGCAACTTTGAGTACTTGTTCAGAATCAAGTAGTGGTACATTTTGTAG
TAGTGGTAGCAGCAGTCTGGGTGAAGAGATCATTTTTGACAACGCCTCAA
TACCAAACGTATCAGTTGGCAAACATACAGATTTTCGTGAAAATTCCCTC
GCTCTTCATTCTGGTGTGACAGCAATGAATTTCGAAAACGTAAACATTCT
CACGTTGAAATCCCGATGAGGGACATGCCGGTCGATATCAAAAATAAACT
ATACGATTCCGAACATGCTTCAAGCATTCGACGTCGCAAGAAACGAAAGT
GAGTGATAGGAAGGAGGTCCGGCAGTAATGGTATAACCGAAATGTTATTG
ACCCCTTCACTCAATAATTTATCATCATACGTTCACGACCAAGACATACA
ATTATGTGAAAAAGAAGATTCAAAAATCCACCTTTGATCCCTCTACTAAT
TCTGGATATTTAGATAAAGCTTTTCGTATTGACCACAAGATGTTGGAGAA
TGAGTTGAACGGCTACCAAAAGCATTTCTACAAATCGAATGGATGTAAGA
AGGCATTGATTCAACAAATCTCCAAGGTGAATAAAGGCTCCAAAGTGAAA
TGCAGTACGGAATCACTATCTGACCCTGCGAAAGTTATTAACTTCATTAA
CGGTCATCAGATTAGAGACTTGCATCGTATAGCTAAGAATAACAAAACAA
GGAAAGCTGATGATGTCAAAGCTTCCAATATTATAGTTCCATCAAATGAG
AAGATCATGAGGAAATTGACTAAGGGAAAAGAACAGATATCATGCAAATG
TCCTAACGGGTTCAAAAGAGTTAATAAAACAGCTCAAATCAATGGAGGAT
GTTTAAATCAGTCTTGCAAGAGACAAACTCATTTGTCACCAATAAAAAAT
GAACGTTCCAAACCAAGAGTAGAGAAGAATAATCATCGAAAAAAGAACAT
AAATGATCCTGAAGATGATAAGCCGAAAGAATATGTCCTTAGATCTTCTC
AGCGCCTTCAGTATATCCACAACATGAAGAAAAGGGACATTGAAATCGAC
AAACCATTAGTGGATAGGATGACAAATATGTTCAATGAACCAATAGACAT
TAGATTAGATACAAAAAAGCTGAATATTCCTGTGTTAAACAACAATCCTC
AATCTAGAGTAAATTGTGAATGGGGCGATTGTAGGCTTTCATTTATTAAT
GCAGAAGACCTTACAGACCATGTTGAATCATCTCACTTGGTTAGTTGTGA
GGAAAGTGACAACTGTAGTTGTATGTGGAGAGATTGCAAGTTTTTGAATC
AATCGTGTTCTTTTAAATGGCTATCAAAGCATGTTTTACGTCATTGCGAT
TTGAAGCCATTTAAATGTGTTATTCTTGGTTGTGATATGACATTTAGTAC
ACAGAATGGACTAGCAAGACATGTCCCAACACATTTTAATGAAAGTCGCG
TTAGACGTGCTTGTGTCTTAACACATGAAGCAGCTAGGAAGGAAGAATTA
AATAAAACTAAAAGACAATTAAGTGCAACTTTGAGTACTTGTTCAGAATC
AAGTAGTGGTACATTTTGTAGTAGTGGTAGCAGCAGTCTGGGTGAAGAGA
TCATTTTTGACAACGCCTCAATACCAAACGTATCAGTTGGCAAACATACA
GATTTTCGTGAAAATTCCCTCGCTCTTCATTCTGGTGTGACAGCAATGAA
TTTCGAAAACGTAAACATTCTCACGTTGAAATCCCGATGAGGGACATGCC
GGTCGATATCAAAAATAAACTATACGATTCCGAACATGCTTCAAGCATTC
GACGTCGCAAGAAACGAAAGTGAGTGATAGGAAGGAGGTCCGGCAGTAAT
GGTATAACCGAAATGTTATTGACCCCTTCACTCAATAATTTATCATCATA
CGTTCACGACCAAGACATACAATTATGTGAAAAAGAAGATTCAAAAATCC
ACCTTTGATCCCTCTACTAATTCTGGATATTTAGATAAAGCTTTTCGTAT
TGACCACAAGATGTTGGAGAATGAGTTGAACGGCTACCAAAAGCATTTCT
ACAAATCGAATGGATGTAAGAAGGCATTGATTCAACAAATCTCCAAGGTG
AATAAAGGCTCCAAAGTGAAATGCAGTACGGAATCACTATCTGACCCTGC
GAAAGTTATTAACTTCATTAACGGTCATCAGATTAGAGACTTGCATCGTA
TAGCTAAGAATAACAAAACAAGGAAAGCTGATGATGTCAAAGCTTCCAAT
ATTATAGTTCCATCAAATGAGAAGATCATGAGGAAATTGACTAAGGGAAA
AGAACAGATATCATGCAAATGTCCTAACGGGTTCAAAAGAGTTAATAAAA
CAGCTCAAATCAATGGAGGATGTTTAAATCAGTCTTGCAAGAGACAAACT
CATTTGTCACCAATAAAAAATGAACGTTCCAAACCAAGAGTAGAGAAGAA
TAATCATCGAAAAAAGAACATAAATGATCCTGAAGATGATAAGCCGAAAG
AATATGTCCTTAGATCTTCTCAGCGCCTTCAGTATATCCACAACATGAAG
AAAAGGGACATTGAAATCGACAAACCATTAGTGGATAGGATGACAAATAT
GTTCAATGAACCAATAGACATTAGATTAGATACAAAAAAGCTGAATATTC
CTGTGTTAAACAACAATCCTCAATCTAGAGTAAATTGTGAATGGGGCGAT
TGTAGGCTTTCATTTATTAATGCAGAAGACCTTACAGACCATGTTGAATC
ATCTCACTTGGTTAGTTGTGAGGAAAGTGACAACTGTAGTTGTATGTGGA
GAGATTGCAAGTTTTTGAATCAATCGTGTTCTTTTAAATGGCTATCAAAG
CATGTTTTACGTCATTGCGATTTGAAGCCATTTAAATGTGTTATTCTTGG
TTGTGATATGACATTTAGTACACAGAATGGACTAGCAAGACATGTCCCAA
CACATTTTAATGAAAGTCGCGTTAGACGTGCTTGTGTCTTAACACATGAA
GCAGCTAGGAAGGAAGAATTAAATAAAACTAAAAGACAATTAAGTGCAAC
TTTGAGTACTTGTTCAGAATCAAGTAGTGGTACATTTTGTAGTAGTGGTA
GCAGCAGTCTGGGTGAAGAGATCATTTTTGACAACGCCTCAATACCAAAC
GTATCAGTTGGCAAACATACAGATTTTCGTGAAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000101_pilon | genome | sc0000101_pilon:1114720..1119404 - |
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