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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000101_pilon:1094002..1096048- Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13060.1.p1 ID=MSTRG.13060.1.p1|Name=MSTRG.13060.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2047bp|location=Sequence derived from alignment at sc0000101_pilon:1094002..1096048- (Clytia hemisphaerica_ch_hm2_pilon)
GTAACATTTCGAAGTTAAAGGATCAAGGCTCAATCATGCATTCTCTACAC
TTTTTTATATTCGCAGTAGTATTTTCGAAAACGTGCGGTAAGATTTCTTT
CTAGTCTTTAATGTTCATTAGTTTAACTTTTTAACCGAGAACTATGACAC
ATTTGTAAGAGTATAGACTATGACTATCATATTAGACCAAAAAACCAGAT
CGATTATTTGTCATAATTTGTAACATTTCTTTCGATAAAACTTTCAGGTT
TTCAGCCTCCTGAGTTTGAAAAATGTGATGTTGAAGACGACAAACATTGG
TTTTGTAAAAAAGGACTCCAATACTTTGACAATTTTTGTGACCAAGATGA
ATCCAAAGCTGCTTGCAAACAAACTTGTAATCTTTGCAACGGACCCCCTA
CTCCTCCACCAGTTCCTAAACCAATATGTGGCGTTTCCAAGGTTTCTCAA
AGCCGTGTAGTCAATGGAGAGGACGCACCCGAAGGAGCATACCCATGGAT
TGCTTCACTTCAAATCCGCGTAGCTATTGAAAATGTCAAATCTCATTTTT
GTGGTGGAACTCTTATCCATCCAAAATGGGTAAGGATGAATTATAATTTA
TGCAATGTCATGTTTTGCTCGTTTTAATCTTCCTTCTCAAAATATTAGAG
GAGGTAAATATAACAGAACGTAAAGCGAAGAAATTTTATACGATGTTATC
GTTGTAAAGAAGTTAAGGTTGTTAATATGACTGTAAAGGGAAAACGTTGT
GGGAACGTTGGATTATATGATATTGAATATATTGAACATTTGTCAAAGTT
CTGTCAGCGGTTATTACCCTCTTGTCCAAAACATGTATTTTCTACTGTAC
TATAAAAATAAATCACCAACCCATGATAATTAATTTTACTTCTTATTTTA
GGTCTTAACAGCTGCTCATTGCTTTGACTTTGGTAATTTCAGTATGAATG
CTATCATGCCATTTATTCACGTTGAGCTCGGTATCCATGACCAAGACAAA
GAAGAATCAACCTCTCAGCTGAGAAACATCAAAAATGCTTTTGAAAGTCC
CGATTTAGGTGTCAAAGATGGAACTTTGTATGGAGATTTACTTTTGTTGG
AACTCGATGTACCAGTCATGTTGAATGATCGAGTCAATTTACCGTGTTTA
CCAGACAAAGAAGAATACCCAACGATTGGTCAGAGCTGTGTTGTGGCAGG
TTAGGCAAACTTCATGTAATCTCAGGTGCCTAACTAACGTTGGGGTCGGA
ATAAACGGGGTTGGTGGAAGAATCTTCAAATTTTGATACATGGGGACCCA
ATTACCGAGGATTGGAAAGTGTACCACTTAATACCACCACTCCCCCCCCC
CCAAATGTAATTTAATTAAAAAAACTAAACCTGGCTATTTAGAGCAACTG
AAAATATTTTCAAAAATTTATTTATTTTTTATTTATTTTTTCATAATTGT
TTTATTGTACAGTTGACTCTCGCTAATTTGAACTGGAAAATGATATCAAA
TCTGGTGTCGAATTATTTTATGAGGGCCTCGCCTTCGACGAGAATAAGTT
TGAAAGAAAACAAGATTCGAATAAAAGAAGTGATCATTAATCGCCTATTG
TATGCACTATTTATTATTTATAGGATGGGGAATAAGAGAATATCCAAGTG
AAAAGACAGGAGGTATTCTTCAACAAACTCGGTTACCGGTTGTTGGGCCA
AATCATATCGGTTGCCATAGCAACACTGAAGTCATTTGCGTTGGTCATGG
ATTTGGAACACAGGCTAATGGTAAACAGCATCCAAACGCGTGCAAAGGAG
ATTCTGGCGGTCCGCTCGTCTGCCAACAACCCAATGGAAGCTGGAAATTC
GTTGGGGTTGCTAGTTATGTTCACACTTATTGTAAATACTACACAGCTTA
CGCTCCAGTCGGCAAATACTTGCCATGGATCAAAGAGCATGTTCCTTTAT
AGACATTTTTTCAAAAGAAAAGAAACGAGTTGAACACATTAAAATTACTC
CGCTCTGTACTGGGGAGAGAAATCGACCGTAGACTCTACCAAAAATT Coding sequence (CDS) from alignment at sc0000101_pilon:1094002..1096048- >MSTRG.13060.1.p1 ID=MSTRG.13060.1.p1|Name=MSTRG.13060.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4176bp|location=Sequence derived from alignment at sc0000101_pilon:1094002..1096048- (Clytia hemisphaerica_ch_hm2_pilon)
GATGGGGAATAAGAGAATATCCAAGTGAAAAGACAGGAGGTATTCTTCAA
CAAACTCGGTTACCGGTTGTTGGGCCAAATCATATCGGTTGCCATAGCAA
CACTGAAGTCATTTGCGTTGGTCATGGATTTGGAACACAGGCTAATGGTA
AACAGCATCCAAACGCGTGCAAAGGAGATTCTGGCGGTCCGCTCGTCTGC
CAACAACCCAATGGAAGCTGGAAATTCGTTGGGGTTGCTAGTTATGTTCA
CACTTATTGTAAATACTACACAGCTTACGCTCCAGTCGGCAAATACTTGC
CATGGATCAAAGAGCATGTTCCTTTATAGGTCTTAACAGCTGCTCATTGC
TTTGACTTTGGTAATTTCAGTATGAATGCTATCATGCCATTTATTCACGT
TGAGCTCGGTATCCATGACCAAGACAAAGAAGAATCAACCTCTCAGCTGA
GAAACATCAAAAATGCTTTTGAAAGTCCCGATTTAGGTGTCAAAGATGGA
ACTTTGTATGGAGATTTACTTTTGTTGGAACTCGATGTACCAGTCATGTT
GAATGATCGAGTCAATTTACCGTGTTTACCAGACAAAGAAGAATACCCAA
CGATTGGTCAGAGCTGTGTTGTGGCAGGTTTTCAGCCTCCTGAGTTTGAA
AAATGTGATGTTGAAGACGACAAACATTGGTTTTGTAAAAAAGGACTCCA
ATACTTTGACAATTTTTGTGACCAAGATGAATCCAAAGCTGCTTGCAAAC
AAACTTGTAATCTTTGCAACGGACCCCCTACTCCTCCACCAGTTCCTAAA
CCAATATGTGGCGTTTCCAAGGTTTCTCAAAGCCGTGTAGTCAATGGAGA
GGACGCACCCGAAGGAGCATACCCATGGATTGCTTCACTTCAAATCCGCG
TAGCTATTGAAAATGTCAAATCTCATTTTTGTGGTGGAACTCTTATCCAT
CCAAAATGGAACATTTCGAAGTTAAAGGATCAAGGCTCAATCATGCATTC
TCTACACTTTTTTATATTCGCAGTAGTATTTTCGAAAACGTGCGGATGGG
GAATAAGAGAATATCCAAGTGAAAAGACAGGAGGTATTCTTCAACAAACT
CGGTTACCGGTTGTTGGGCCAAATCATATCGGTTGCCATAGCAACACTGA
AGTCATTTGCGTTGGTCATGGATTTGGAACACAGGCTAATGGTAAACAGC
ATCCAAACGCGTGCAAAGGAGATTCTGGCGGTCCGCTCGTCTGCCAACAA
CCCAATGGAAGCTGGAAATTCGTTGGGGTTGCTAGTTATGTTCACACTTA
TTGTAAATACTACACAGCTTACGCTCCAGTCGGCAAATACTTGCCATGGA
TCAAAGAGCATGTTCCTTTATAGGTCTTAACAGCTGCTCATTGCTTTGAC
TTTGGTAATTTCAGTATGAATGCTATCATGCCATTTATTCACGTTGAGCT
CGGTATCCATGACCAAGACAAAGAAGAATCAACCTCTCAGCTGAGAAACA
TCAAAAATGCTTTTGAAAGTCCCGATTTAGGTGTCAAAGATGGAACTTTG
TATGGAGATTTACTTTTGTTGGAACTCGATGTACCAGTCATGTTGAATGA
TCGAGTCAATTTACCGTGTTTACCAGACAAAGAAGAATACCCAACGATTG
GTCAGAGCTGTGTTGTGGCAGGTTTTCAGCCTCCTGAGTTTGAAAAATGT
GATGTTGAAGACGACAAACATTGGTTTTGTAAAAAAGGACTCCAATACTT
TGACAATTTTTGTGACCAAGATGAATCCAAAGCTGCTTGCAAACAAACTT
GTAATCTTTGCAACGGACCCCCTACTCCTCCACCAGTTCCTAAACCAATA
TGTGGCGTTTCCAAGGTTTCTCAAAGCCGTGTAGTCAATGGAGAGGACGC
ACCCGAAGGAGCATACCCATGGATTGCTTCACTTCAAATCCGCGTAGCTA
TTGAAAATGTCAAATCTCATTTTTGTGGTGGAACTCTTATCCATCCAAAA
TGGAACATTTCGAAGTTAAAGGATCAAGGCTCAATCATGCATTCTCTACA
CTTTTTTATATTCGCAGTAGTATTTTCGAAAACGTGCGGATGGGGAATAA
GAGAATATCCAAGTGAAAAGACAGGAGGTATTCTTCAACAAACTCGGTTA
CCGGTTGTTGGGCCAAATCATATCGGTTGCCATAGCAACACTGAAGTCAT
TTGCGTTGGTCATGGATTTGGAACACAGGCTAATGGTAAACAGCATCCAA
ACGCGTGCAAAGGAGATTCTGGCGGTCCGCTCGTCTGCCAACAACCCAAT
GGAAGCTGGAAATTCGTTGGGGTTGCTAGTTATGTTCACACTTATTGTAA
ATACTACACAGCTTACGCTCCAGTCGGCAAATACTTGCCATGGATCAAAG
AGCATGTTCCTTTATAGGTCTTAACAGCTGCTCATTGCTTTGACTTTGGT
AATTTCAGTATGAATGCTATCATGCCATTTATTCACGTTGAGCTCGGTAT
CCATGACCAAGACAAAGAAGAATCAACCTCTCAGCTGAGAAACATCAAAA
ATGCTTTTGAAAGTCCCGATTTAGGTGTCAAAGATGGAACTTTGTATGGA
GATTTACTTTTGTTGGAACTCGATGTACCAGTCATGTTGAATGATCGAGT
CAATTTACCGTGTTTACCAGACAAAGAAGAATACCCAACGATTGGTCAGA
GCTGTGTTGTGGCAGGTTTTCAGCCTCCTGAGTTTGAAAAATGTGATGTT
GAAGACGACAAACATTGGTTTTGTAAAAAAGGACTCCAATACTTTGACAA
TTTTTGTGACCAAGATGAATCCAAAGCTGCTTGCAAACAAACTTGTAATC
TTTGCAACGGACCCCCTACTCCTCCACCAGTTCCTAAACCAATATGTGGC
GTTTCCAAGGTTTCTCAAAGCCGTGTAGTCAATGGAGAGGACGCACCCGA
AGGAGCATACCCATGGATTGCTTCACTTCAAATCCGCGTAGCTATTGAAA
ATGTCAAATCTCATTTTTGTGGTGGAACTCTTATCCATCCAAAATGGAAC
ATTTCGAAGTTAAAGGATCAAGGCTCAATCATGCATTCTCTACACTTTTT
TATATTCGCAGTAGTATTTTCGAAAACGTGCGGATGGGGAATAAGAGAAT
ATCCAAGTGAAAAGACAGGAGGTATTCTTCAACAAACTCGGTTACCGGTT
GTTGGGCCAAATCATATCGGTTGCCATAGCAACACTGAAGTCATTTGCGT
TGGTCATGGATTTGGAACACAGGCTAATGGTAAACAGCATCCAAACGCGT
GCAAAGGAGATTCTGGCGGTCCGCTCGTCTGCCAACAACCCAATGGAAGC
TGGAAATTCGTTGGGGTTGCTAGTTATGTTCACACTTATTGTAAATACTA
CACAGCTTACGCTCCAGTCGGCAAATACTTGCCATGGATCAAAGAGCATG
TTCCTTTATAGGTCTTAACAGCTGCTCATTGCTTTGACTTTGGTAATTTC
AGTATGAATGCTATCATGCCATTTATTCACGTTGAGCTCGGTATCCATGA
CCAAGACAAAGAAGAATCAACCTCTCAGCTGAGAAACATCAAAAATGCTT
TTGAAAGTCCCGATTTAGGTGTCAAAGATGGAACTTTGTATGGAGATTTA
CTTTTGTTGGAACTCGATGTACCAGTCATGTTGAATGATCGAGTCAATTT
ACCGTGTTTACCAGACAAAGAAGAATACCCAACGATTGGTCAGAGCTGTG
TTGTGGCAGGTTTTCAGCCTCCTGAGTTTGAAAAATGTGATGTTGAAGAC
GACAAACATTGGTTTTGTAAAAAAGGACTCCAATACTTTGACAATTTTTG
TGACCAAGATGAATCCAAAGCTGCTTGCAAACAAACTTGTAATCTTTGCA
ACGGACCCCCTACTCCTCCACCAGTTCCTAAACCAATATGTGGCGTTTCC
AAGGTTTCTCAAAGCCGTGTAGTCAATGGAGAGGACGCACCCGAAGGAGC
ATACCCATGGATTGCTTCACTTCAAATCCGCGTAGCTATTGAAAATGTCA
AATCTCATTTTTGTGGTGGAACTCTTATCCATCCAAAATGGAACATTTCG
AAGTTAAAGGATCAAGGCTCAATCATGCATTCTCTACACTTTTTTATATT
CGCAGTAGTATTTTCGAAAACGTGCG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000101_pilon | genome | sc0000101_pilon:1094002..1096048 - |
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