MSTRG.13058.1.p1 (mRNA) -

Overview
NameMSTRG.13058.1.p1
Unique NameMSTRG.13058.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000101_pilon:1085401..1086265+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.13058.1.p1 ID=MSTRG.13058.1.p1|Name=MSTRG.13058.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=865bp|location=Sequence derived from alignment at sc0000101_pilon:1085401..1086265+ (Clytia hemisphaerica_ch_hm2_pilon)
TGCGCTTGGCTTTTATTTTTAGTAGCTGTTGGATTGTAGCTTGCAGTGAG TCTCTTAACTTACTGTAGCTAGGTAAAACTTTATAACAAAATGGGCCTAA Aaagataatcaaataaacaaattctcactgcaaaattttatgctaatttt ccccactgaattttctgactggaaaacaatggaaaatcaatctccatcga gtttcagtcagtTATTTTTACCCCGAATGAGTGAAAGAATTCTACCGGGC CTGCGAGAAGAGGGTGTTCTAATAACTCAAAATAACCTGTATTCAGCGGG ATCGATCCTAAAAACTTGTGAAAATGTGGTCCTTCCCTTCCTTCCAAAGA TGCATGCAGTGATACAGACGAAGATTGTGCACGATTCAAAGATTTGTGCG GCGTGAACAGTTATGTTGACAAACACTGCGTCAAATCATGCGAGAGGTGT GGTGGAGAGGGTGGAgccaccacaacaacaacaacaacaacagcttCTCC TAGCAAAGGAAATGGTGCTACTACAAGCACAGCAACAACATATCCCATGG CAACAAAAGGTCAGTTCGTCATTCAGAAGCTCAGATATGGTGAGACAGAA AATTATCacctttatttttggaaaagccttAAGATCTCAACTATGAAATG ATACTTTTACTTATCAGTTATTCTCCCTTGATTTAGTTCCATGTGTCGAC AATGATCCAGATTGTCCAGGATTAGTAGACTTGTGTGGAATAAACAGTTA TGTAGACAAATACTGTTTGAAGACATGTCCTGAAGCGTGTAAGAAGTTGA ACAATGGAGATGGCGATGGTGGTGAAAGTCAAGGAAATAAAAATGCGAAA TGTGGAGTTTCAGAG

Coding sequence (CDS) from alignment at sc0000101_pilon:1085401..1086265+

>MSTRG.13058.1.p1 ID=MSTRG.13058.1.p1|Name=MSTRG.13058.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1296bp|location=Sequence derived from alignment at sc0000101_pilon:1085401..1086265+ (Clytia hemisphaerica_ch_hm2_pilon)
CGCTTGGCTTTTATTTTTAGTAGCTGTTGGATTGTAGCTTGCAATGCATG
CAGTGATACAGACGAAGATTGTGCACGATTCAAAGATTTGTGCGGCGTGA
ACAGTTATGTTGACAAACACTGCGTCAAATCATGCGAGAGGTGTGGTGGA
GAGGGTGGAgccaccacaacaacaacaacaacaacagcttCTCCTAGCAA
AGGAAATGGTGCTACTACAAGCACAGCAACAACATATCCCATGGCAACAA
AAGTTCCATGTGTCGACAATGATCCAGATTGTCCAGGATTAGTAGACTTG
TGTGGAATAAACAGTTATGTAGACAAATACTGTTTGAAGACATGTCCTGA
AGCGTGTAAGAAGTTGAACAATGGAGATGGCGATGGTGGTGAAAGTCAAG
GAAATAAAAATGCGAAATGTGGAGTTTCAGAGCGCTTGGCTTTTATTTTT
AGTAGCTGTTGGATTGTAGCTTGCAATGCATGCAGTGATACAGACGAAGA
TTGTGCACGATTCAAAGATTTGTGCGGCGTGAACAGTTATGTTGACAAAC
ACTGCGTCAAATCATGCGAGAGGTGTGGTGGAGAGGGTGGAgccaccaca
acaacaacaacaacaacagcttCTCCTAGCAAAGGAAATGGTGCTACTAC
AAGCACAGCAACAACATATCCCATGGCAACAAAAGTTCCATGTGTCGACA
ATGATCCAGATTGTCCAGGATTAGTAGACTTGTGTGGAATAAACAGTTAT
GTAGACAAATACTGTTTGAAGACATGTCCTGAAGCGTGTAAGAAGTTGAA
CAATGGAGATGGCGATGGTGGTGAAAGTCAAGGAAATAAAAATGCGAAAT
GTGGAGTTTCAGAGCGCTTGGCTTTTATTTTTAGTAGCTGTTGGATTGTA
GCTTGCAATGCATGCAGTGATACAGACGAAGATTGTGCACGATTCAAAGA
TTTGTGCGGCGTGAACAGTTATGTTGACAAACACTGCGTCAAATCATGCG
AGAGGTGTGGTGGAGAGGGTGGAgccaccacaacaacaacaacaacaaca
gcttCTCCTAGCAAAGGAAATGGTGCTACTACAAGCACAGCAACAACATA
TCCCATGGCAACAAAAGTTCCATGTGTCGACAATGATCCAGATTGTCCAG
GATTAGTAGACTTGTGTGGAATAAACAGTTATGTAGACAAATACTGTTTG
AAGACATGTCCTGAAGCGTGTAAGAAGTTGAACAATGGAGATGGCGATGG
TGGTGAAAGTCAAGGAAATAAAAATGCGAAATGTGGAGTTTCAGAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.13058MSTRG.13058Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13058.1.p1.exon1MSTRG.13058.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13058.1.p1.exon2MSTRG.13058.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13058.1.p1.exon3MSTRG.13058.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13058.1.p1MSTRG.13058.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000101_pilongenomesc0000101_pilon:1085401..1086265 +