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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000101_pilon:1063028..1066896- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13057.1.p1 ID=MSTRG.13057.1.p1|Name=MSTRG.13057.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3869bp|location=Sequence derived from alignment at sc0000101_pilon:1063028..1066896- (Clytia hemisphaerica_ch_hm2_pilon)
CACAAATTCAAATGATAAGCGGTGTTTTTCGATTATTAGATCATTTAAAA
CCGGAATTCATGATAAGTTTTTGGTGCGTGCCATAAATCCGAACGACGTG
TAATCTGATCCGGAACAATATTCAATCCGTGTTTCTCAATCACCCAAATA
AAAGTTGTCAAAATATTAAGATATCAAAAACACATCCAAGACAGGCATCA
AGTGTTGGAATGAGGGATATGACAAGTTTGTACGTGAAGCAAAAATAGAA
GGTCACTTGTTTTTGAGAAAACTTCTCATAACATATTACTACAAAAATTG
GTAGCAGAAGGAATATCGACACAAAAATCAATCAATAAAAGTATGATATA
ATAATATGTCTATATGAAAAGTTTTTTTTAATTCATCATCAAAAATCTTT
GTATAGAAGGGAATCGCGATTATCGAGTGAGAACGGATAGTGTTTTACAA
AGGAAAAATGATAAATGAATAAAAAATAGACCTTGTTAGAAAAAATAAGA
TTTGCTGCTGGAAAACTTTCTATTAATAGGAAGGCACAGTTAGTTTATTC
CTAGCTATTTGTTTGCAGTACAAGCCTCTTGTGGTGAGAGTTAGCTCTCA
TCAAAGTCAATTCAAGTTTGGGGCTCAAGAAGTCATGTGGTTTATTTCTA
TGGTCAACTATACAGCACATATTCATGAAACATTTAAACTCAACTAAGTT
GTTGACAAATGGCGAAGCAAGAACATGTTGATAAAGGAAGGGTATATTCT
TAAAAGCACGCGTGAATTTATGACAAAAACAAGTATATTTTTCTACTTTA
GTCAAGGGCATAATTAACGCATAATTCTGAAGTTTTCATACAATTTCTTC
TCTTTTCAGGTAATCTCTCAAACGGACACGGCTACGGACCACATTGGTCG
ACGACTCTCCATAAATGAAATTGTACGGTCAGATAGCACTATGGGTTTAC
ACTCTCTTGTCTCTTACATTATTGGCTAGTTGCTTGCCACACGACCCATC
AAATGAAAAATCACGTGGTCAACCATCCTTCATAATCGACTATCAAAATG
ATTGTTTCCTTAAAGATGGAAAGCCGTTCCGGTATATTTCCGGTGGATTA
CATTATTTCCGGATTCCTTCGTTCTATTGGAAAGATCGAATACAAAAAGC
AAAAGCACTTGGTTTAAACACTATACAGACCTATATACCATGGAATTTCC
ACAATCCAGAACCAGGGGTATACAAATTCAATGGCGAACAAGATTTATTG
AAGTTTATAGATGTGGTACAAGAAGAAGGCATGCTGTTGATTCTACGCCC
AGGACCTTATGTTGATGCTGAATGGGAGTATGGAGGTTTCCCATGGTTCC
TTAAGAATGAACAAACAATGGAAATGAGAACTTCAGATCCAACCTATATG
CGTTATGTTCAGGGATGGTTTGACATGCTTTTTCCAAGATTAGCAATGAA
ACTGTACAAAAATGGAGGACCGATTATAGCATTTCAAGTAGAGAACGAAT
ATGGAAATTATTATGCATGCGATAAAGAATATCTTTCACTTCTCAAGAGT
ATATATGTGAAATATTTTGGTGAAGATACAGTTCTATTTACAACAGATGG
GTATACGGACAACTATATGTCTTGCGGAACAACTCCGGAAATCTTTGCAA
CTATTGATTTCGGAACTGAGATTACGCCGGAGGAAGCATTTGCACAACAG
CGGAAATATCAAACGAAAGGACCCCTTGTGAATTCTGAATACTATACAGG
CTGGTTAGACTATTGGGGAAGTCCTCATCAGCGACGTGGTGCTGACGTCA
TTGCAAAACACTTGAAAGATATTTTAACAACAAATGCTTCCTTGAATCTA
TACATGCTTCACGGAGGAACAAACTTCGGCTTCATGAATGGTGTAGATAT
AGGTTCTAAAGGGTCTCGATTGATATCACCAACCAGCTATGACTATGATG
CTCCTTTATCTGAAGCTGGTGACACGACCTGGAAGTATTTCAAAATGCGA
GAAGTTTTGAAACAATTCAATGCAAATCCTTTACCTGCAGTCCCAGCAAA
CACTTCAAAACTGGTTCAAGGAGCTTTACGAGTACCACCACTGAAAACAT
TTGTTGATTTTAAAGGATACTTAGTCTATTGGGGTCTAAATGTTATTGAA
AGTGATTCTCCAAAACCAATGTCCGAGCTCGGTCTTGGTTATGGCTTCGT
TTGTTATACACCACAAATCCCTCCAAAATATCAGAATAAAACAGTAACAT
TGGTTTTCAAAGAAATGTCAGATGAAGCTATATTCGTCGTTGATAATGTT
TATAAATTTAGTATTGGAGAAGCGGTCAAGAACTACGAGTTGAAGATAGA
ACTAGGTGTTGAGTTGGATATTTTGGTAGTTAACCAAGGTCGAGCAGCTT
ATGCACCCAAAGGATATCATTATCTTCAAGAATGTAAAGGAATATGTGGA
GATGTGAGATTCAAAGATTCCAATGAAACGTTGAAAGGATGGAAGCAGTA
TAATATTAATGATACAACCATTTGGGAAGAGAATCACCCAAACTTTCCTG
CTGAGAATCATATCGGAAAGACCACCAAAGGATCAGACCTGATGGATAGA
TTCTTTGAAGATAGTGAAAATCGCAAAGAAGATCAATTCAAAATCCAACC
AATATTACCGATCGAAAACAACCTGGATAGATATCCTAGTCAGATAAAAT
CAACACAAAAAGAATACCAATTTGTTTGGGAATCGTTTTTCGCCCTACAA
AACACCACTGATACATATTTACGAATGAAAGGTTTCAATAAGGGTCAAGT
CTATCTCAACATGTATAACTTGGGTCGATTTTGGCAAGAAAAAGGGCCAC
AAAAGACTTTGTTCGTACCAAAGAATTATCTGCAAGCCGGTTTAAATGTT
CTTTTGGTAATAGCTTTGGATGATTATCCAACACTCCAACTTAATCCGCC
TCAGTATCCAGAATTTGAATTTGTGGTTCAACCTGACTTAGGATAAATTT
AGTTTTTCTAAATTCTCTATATAGTAGATATTTAGGATTTTTAGCCAAAA
TCTAGATTATTTTTAACTGAATTGTATGTTGGCAATATAGAGAGGTGTAC
TGGTTTCCTGAATTGCGATTTCTGGAAACGAAAAGAAGATTCAAAAAACG
ATACTGATAGGTTTAAAACTTCTTGCTTTTAAGGTTAGGGCCCCGGTTGA
TATGTCTCCCTAATGGGAATGGTAATGAGGAGCTGAAAGCTCTTTCCCCG
CGTAAGCTTTTTCAATAGAGGACGTGTGGCTCCACTGGCTGGAGAAGCAG
AAATACTCTTTAGAATATTACGGAACTCGAACCTCTATAACTTAAAATGT
CGACTTAAGCCGAACATTCAGTCAGCAATGCCTTATAAACCTTACTCCAC
AACTCGAAATTTCCTTAAACTCGTGCTCCCCGTTCGTGTTCGAGTTATGG
AGACTCCACTGTATATATAGCTCAAAGGATAATTATTATAGTAAATTCAA
TTTTTTAAAGAGGTGATTAAATATGGTACAGACTTTTATCATTTTAGTAT
TTTAGAAATTTTATGATATAGGAATACATTTATGATAGAACGCTAAATAA
AAAATCCAAACGAGTTCACTTCTTAACATTTTTGGGCGAATCTTTGTCAA
GCTGGTTTCAACTTAATTACAAATCCAATAACCCTTCTAGCAATAAAACA
ACTGCGTCAAAACAACTTACCTATGTACTTAGAAGTCAACCCATTTGTCC
TAGACAAAAATCTTTTTAAAAGTAATGAAATTCTTATGTTTTGATGCTGC
ACAGAATAGAGCTGAGTAAGAAAAAAAGCTCAGTAGGTATTCTCATCTTA
ATTAATTTTAATATACCAG Coding sequence (CDS) from alignment at sc0000101_pilon:1063028..1066896- >MSTRG.13057.1.p1 ID=MSTRG.13057.1.p1|Name=MSTRG.13057.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2082bp|location=Sequence derived from alignment at sc0000101_pilon:1063028..1066896- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAATTGTACGGTCAGATAGCACTATGGGTTTACACTCTCTTGTCTCT
TACATTATTGGCTAGTTGCTTGCCACACGACCCATCAAATGAAAAATCAC
GTGGTCAACCATCCTTCATAATCGACTATCAAAATGATTGTTTCCTTAAA
GATGGAAAGCCGTTCCGGTATATTTCCGGTGGATTACATTATTTCCGGAT
TCCTTCGTTCTATTGGAAAGATCGAATACAAAAAGCAAAAGCACTTGGTT
TAAACACTATACAGACCTATATACCATGGAATTTCCACAATCCAGAACCA
GGGGTATACAAATTCAATGGCGAACAAGATTTATTGAAGTTTATAGATGT
GGTACAAGAAGAAGGCATGCTGTTGATTCTACGCCCAGGACCTTATGTTG
ATGCTGAATGGGAGTATGGAGGTTTCCCATGGTTCCTTAAGAATGAACAA
ACAATGGAAATGAGAACTTCAGATCCAACCTATATGCGTTATGTTCAGGG
ATGGTTTGACATGCTTTTTCCAAGATTAGCAATGAAACTGTACAAAAATG
GAGGACCGATTATAGCATTTCAAGTAGAGAACGAATATGGAAATTATTAT
GCATGCGATAAAGAATATCTTTCACTTCTCAAGAGTATATATGTGAAATA
TTTTGGTGAAGATACAGTTCTATTTACAACAGATGGGTATACGGACAACT
ATATGTCTTGCGGAACAACTCCGGAAATCTTTGCAACTATTGATTTCGGA
ACTGAGATTACGCCGGAGGAAGCATTTGCACAACAGCGGAAATATCAAAC
GAAAGGACCCCTTGTGAATTCTGAATACTATACAGGCTGGTTAGACTATT
GGGGAAGTCCTCATCAGCGACGTGGTGCTGACGTCATTGCAAAACACTTG
AAAGATATTTTAACAACAAATGCTTCCTTGAATCTATACATGCTTCACGG
AGGAACAAACTTCGGCTTCATGAATGGTGTAGATATAGGTTCTAAAGGGT
CTCGATTGATATCACCAACCAGCTATGACTATGATGCTCCTTTATCTGAA
GCTGGTGACACGACCTGGAAGTATTTCAAAATGCGAGAAGTTTTGAAACA
ATTCAATGCAAATCCTTTACCTGCAGTCCCAGCAAACACTTCAAAACTGG
TTCAAGGAGCTTTACGAGTACCACCACTGAAAACATTTGTTGATTTTAAA
GGATACTTAGTCTATTGGGGTCTAAATGTTATTGAAAGTGATTCTCCAAA
ACCAATGTCCGAGCTCGGTCTTGGTTATGGCTTCGTTTGTTATACACCAC
AAATCCCTCCAAAATATCAGAATAAAACAGTAACATTGGTTTTCAAAGAA
ATGTCAGATGAAGCTATATTCGTCGTTGATAATGTTTATAAATTTAGTAT
TGGAGAAGCGGTCAAGAACTACGAGTTGAAGATAGAACTAGGTGTTGAGT
TGGATATTTTGGTAGTTAACCAAGGTCGAGCAGCTTATGCACCCAAAGGA
TATCATTATCTTCAAGAATGTAAAGGAATATGTGGAGATGTGAGATTCAA
AGATTCCAATGAAACGTTGAAAGGATGGAAGCAGTATAATATTAATGATA
CAACCATTTGGGAAGAGAATCACCCAAACTTTCCTGCTGAGAATCATATC
GGAAAGACCACCAAAGGATCAGACCTGATGGATAGATTCTTTGAAGATAG
TGAAAATCGCAAAGAAGATCAATTCAAAATCCAACCAATATTACCGATCG
AAAACAACCTGGATAGATATCCTAGTCAGATAAAATCAACACAAAAAGAA
TACCAATTTGTTTGGGAATCGTTTTTCGCCCTACAAAACACCACTGATAC
ATATTTACGAATGAAAGGTTTCAATAAGGGTCAAGTCTATCTCAACATGT
ATAACTTGGGTCGATTTTGGCAAGAAAAAGGGCCACAAAAGACTTTGTTC
GTACCAAAGAATTATCTGCAAGCCGGTTTAAATGTTCTTTTGGTAATAGC
TTTGGATGATTATCCAACACTCCAACTTAATCCGCCTCAGTATCCAGAAT
TTGAATTTGTGGTTCAACCTGACTTAGGATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000101_pilon | genome | sc0000101_pilon:1063028..1066896 - |
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