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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000101_pilon:797385..799537+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13044.1.p1 ID=MSTRG.13044.1.p1|Name=MSTRG.13044.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2153bp|location=Sequence derived from alignment at sc0000101_pilon:797385..799537+ (Clytia hemisphaerica_ch_hm2_pilon)
CAGCTCAAGTTGATTTACAAAGACAAAAAGAAGGAACAAgaacagatttt
gaaaaaattgctgATAATGTCATTCAGAAAGTGAATTCTACTTTTAAAGT
GAAGCAGAAACAGTCTGCATGTATGCAAAATATTGTAAATGGGAAAGATA
CTCTTGCAATATTGCCAACTTCTTATGGCAAAAGCCTGATATATCAAATG
TTGCCAGCTTTATTTGTTGAGATGAACATGGCCACAAACCCATTGGTTAT
TGTTATTTCACCATTAAAGTCACTCATCAGAAACCAGCTTGACGAAATTA
AAGAGTTGGAAACTTTTCTGCAGATAAAAGGCTGTAGTTTGGACAGTCAC
AATACTGTAGATTCCATCAAAGGTGGTGGATTCAATCTAATATTTGGAAT
TCCTGAGTTGTGGCTTTCAACTCCAGTGAAGGAAATGTTGGCATCAAGCT
ATTTTAGACGAAACCTTGTATGTGTCGTGGTTGATGAAGCTCATAAAGTT
GCCTGGTAGGTATAATTTTTTACTGTCGTAAATCATTGGTTTTATCCACA
TTTAGCTATATTAGACCACAATTCACACATGCAAACTTTGGTGGATGAGA
TTAGAAACTTTCAAAGCGACTTCAAGCAAAATCTGGCTGCTTTTTTCAAG
TTCCTTATATGTCTTTCTAGAATTCTTTTGCGTTCTTTCCAATAACaggt
tattttttaaaaagaatcttgctttttctatactaagttttattttttgt
taatatAGGGGTCTTGCCGAATCATCAAGTGAAAGTGCATTTCGTGAAGC
ATTTGGACGCATAGGGGAAATCCGCTCATTTTGTGCCGAGAAAGTACCAA
TTCTGGCGTTAAGCGCAACGATTGATATTGACTTTGCTGACATTGTCAAA
GCTTGCTGTTCCATGTCAAAATATATGAGGCTAATCCACTCATGCAGTGA
TCGATCTAACATACGACTCTCCATTGTGCCAATTAAAGCAAAGTCAGTGA
GTTGTTTCAACTGGCTTATGAAGTGGTTGGTTGAAAGGAAGAGTGAATGT
TCGAAAGTTTTGATCTATTGCAATTCCCAAAATCTTGTCTCCTGGTTGTT
TGGCCAGTTCACTTCAGTTCTGGGACTCGATATGTACGTCAATGGCATCA
AGGACCCAAATAATTTGTTGATAAATATGTTTCATGCAGACAGTCCAGAA
TTTGTTAAAAACAGATGTTTGAAGTCCCTTACAAGTGACGAGCAGCTTCC
CAGAGTGGTGATTGCAACTAGTGCAATTGGTTGTGGTATCAATGTCAAAA
ATCTTCAGTATGTTTGTCATTTTGGACCTGCCTATTCCCTGGTTGACTAT
TGTCAACAAATTGGTCGTGCTGGCAGAAACGGTGACCCAAACTGCCATGC
AGTGTTGTACAGCTATCCATcggcaaacaaaaaaatcaacgaGAAAATGA
AGGCATACATTAAATCAAAGGATGTATGTCTCCGCACTGAATTATTTTCT
CCGTTCAGTGAATCAAACAATGTCCCACCACTTGAGATTGGACATACCTG
TTGTTCGATTTGTTCGTCATCCTGTACATGTGATACAGACCATACCACTC
TATTTccatttgaagaagaaaatgattttttcatgcCATCTCCAAAAGTG
TCTATCAGGGAAGTTTCCGAAAAAGATAAAGCATCTATCAGAACTCTATT
GAAAGACTATCACAGAAACTGCTTatcagaaaatttgaactttccATCCT
CTGCAATGAGTGGCTTAACAGAGAAAATCgttgaagaaattttaaataat
cTGGAATACATAGACTCTCCAAAATTTTTGATGGACAACTTGAGCATACT
TGATTCAAACGTGGCTGGATGTGTTTTTGAGATTATATGTAATTTTTATT
CTGATAAAAATCTGAATGATCTGTTTGATATTGACATGGAAATCGAACCA
ATCGTAAAGAAAACAGATACTAATATTGAAAAGTATACATTTTCAGACTA
TGAATATTCTGATATTGATACAGATCTCGAAAATGATTATTTATAAAGTT
GGTACATATCTTTACACCTTTGGTTACTATTTACAtatcattttacattt
ttataaaaacttaaaagggcttaagaaaagaaatttccaaGTTTCAATGT
CAC Coding sequence (CDS) from alignment at sc0000101_pilon:797385..799537+ >MSTRG.13044.1.p1 ID=MSTRG.13044.1.p1|Name=MSTRG.13044.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3132bp|location=Sequence derived from alignment at sc0000101_pilon:797385..799537+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCCACAAACCCATTGGTTATTGTTATTTCACCATTAAAGTCACTCAT
CAGAAACCAGCTTGACGAAATTAAAGAGTTGGAAACTTTTCTGCAGATAA
AAGGCTGTAGTTTGGACAGTCACAATACTGTAGATTCCATCAAAGGTGGT
GGATTCAATCTAATATTTGGAATTCCTGAGTTGTGGCTTTCAACTCCAGT
GAAGGAAATGTTGGCATCAAGCTATTTTAGACGAAACCTTGTATGTGTCG
TGGTTGATGAAGCTCATAAAGTTGCCTGGGGTCTTGCCGAATCATCAAGT
GAAAGTGCATTTCGTGAAGCATTTGGACGCATAGGGGAAATCCGCTCATT
TTGTGCCGAGAAAGTACCAATTCTGGCGTTAAGCGCAACGATTGATATTG
ACTTTGCTGACATTGTCAAAGCTTGCTGTTCCATGTCAAAATATATGAGG
CTAATCCACTCATGCAGTGATCGATCTAACATACGACTCTCCATTGTGCC
AATTAAAGCAAAGTCAGTGAGTTGTTTCAACTGGCTTATGAAGTGGTTGG
TTGAAAGGAAGAGTGAATGTTCGAAAGTTTTGATCTATTGCAATTCCCAA
AATCTTGTCTCCTGGTTGTTTGGCCAGTTCACTTCAGTTCTGGGACTCGA
TATGTACGTCAATGGCATCAAGGACCCAAATAATTTGTTGATAAATATGT
TTCATGCAGACAGTCCAGAATTTGTTAAAAACAGATGTTTGAAGTCCCTT
ACAAGTGACGAGCAGCTTCCCAGAGTGGTGATTGCAACTAGTGCAATTGG
TTGTGGTATCAATGTCAAAAATCTTCAGTATGTTTGTCATTTTGGACCTG
CCTATTCCCTGGTTGACTATTGTCAACAAATTGGTCGTGCTGGCAGAAAC
GGTGACCCAAACTGCCATGCAGTGTTGTACAGCTATCCATcggcaaacaa
aaaaatcaacgaGAAAATGAAGGCATACATTAAATCAAAGGATGTATGTC
TCCGCACTGAATTATTTTCTCCGTTCAGTGAATCAAACAATGTCCCACCA
CTTGAGATTGGACATACCTGTTGTTCGATTTGTTCGTCATCCTGTACATG
TGATACAGACCATACCACTCTATTTccatttgaagaagaaaatgattttt
tcatgcCATCTCCAAAAGTGTCTATCAGGGAAGTTTCCGAAAAAGATAAA
GCATCTATCAGAACTCTATTGAAAGACTATCACAGAAACTGCTTatcaga
aaatttgaactttccATCCTCTGCAATGAGTGGCTTAACAGAGAAAATCg
ttgaagaaattttaaataatcTGGAATACATAGACTCTCCAAAATTTTTG
ATGGACAACTTGAGCATACTTGATTCAAACGTGGCTGGATGTGTTTTTGA
GATTATATGTAATTTTTATTCTGATAAAAATCTGAATGATCTGTTTGATA
TTGACATGGAAATCGAACCAATCGTAAAGAAAACAGATACTAATATTGAA
AAGTATACATTTTCAGACTATGAATATTCTGATATTGATACAGATCTCGA
AAATGATTATTTATAAATGGCCACAAACCCATTGGTTATTGTTATTTCAC
CATTAAAGTCACTCATCAGAAACCAGCTTGACGAAATTAAAGAGTTGGAA
ACTTTTCTGCAGATAAAAGGCTGTAGTTTGGACAGTCACAATACTGTAGA
TTCCATCAAAGGTGGTGGATTCAATCTAATATTTGGAATTCCTGAGTTGT
GGCTTTCAACTCCAGTGAAGGAAATGTTGGCATCAAGCTATTTTAGACGA
AACCTTGTATGTGTCGTGGTTGATGAAGCTCATAAAGTTGCCTGGGGTCT
TGCCGAATCATCAAGTGAAAGTGCATTTCGTGAAGCATTTGGACGCATAG
GGGAAATCCGCTCATTTTGTGCCGAGAAAGTACCAATTCTGGCGTTAAGC
GCAACGATTGATATTGACTTTGCTGACATTGTCAAAGCTTGCTGTTCCAT
GTCAAAATATATGAGGCTAATCCACTCATGCAGTGATCGATCTAACATAC
GACTCTCCATTGTGCCAATTAAAGCAAAGTCAGTGAGTTGTTTCAACTGG
CTTATGAAGTGGTTGGTTGAAAGGAAGAGTGAATGTTCGAAAGTTTTGAT
CTATTGCAATTCCCAAAATCTTGTCTCCTGGTTGTTTGGCCAGTTCACTT
CAGTTCTGGGACTCGATATGTACGTCAATGGCATCAAGGACCCAAATAAT
TTGTTGATAAATATGTTTCATGCAGACAGTCCAGAATTTGTTAAAAACAG
ATGTTTGAAGTCCCTTACAAGTGACGAGCAGCTTCCCAGAGTGGTGATTG
CAACTAGTGCAATTGGTTGTGGTATCAATGTCAAAAATCTTCAGTATGTT
TGTCATTTTGGACCTGCCTATTCCCTGGTTGACTATTGTCAACAAATTGG
TCGTGCTGGCAGAAACGGTGACCCAAACTGCCATGCAGTGTTGTACAGCT
ATCCATcggcaaacaaaaaaatcaacgaGAAAATGAAGGCATACATTAAA
TCAAAGGATGTATGTCTCCGCACTGAATTATTTTCTCCGTTCAGTGAATC
AAACAATGTCCCACCACTTGAGATTGGACATACCTGTTGTTCGATTTGTT
CGTCATCCTGTACATGTGATACAGACCATACCACTCTATTTccatttgaa
gaagaaaatgattttttcatgcCATCTCCAAAAGTGTCTATCAGGGAAGT
TTCCGAAAAAGATAAAGCATCTATCAGAACTCTATTGAAAGACTATCACA
GAAACTGCTTatcagaaaatttgaactttccATCCTCTGCAATGAGTGGC
TTAACAGAGAAAATCgttgaagaaattttaaataatcTGGAATACATAGA
CTCTCCAAAATTTTTGATGGACAACTTGAGCATACTTGATTCAAACGTGG
CTGGATGTGTTTTTGAGATTATATGTAATTTTTATTCTGATAAAAATCTG
AATGATCTGTTTGATATTGACATGGAAATCGAACCAATCGTAAAGAAAAC
AGATACTAATATTGAAAAGTATACATTTTCAGACTATGAATATTCTGATA
TTGATACAGATCTCGAAAATGATTATTTATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000101_pilon | genome | sc0000101_pilon:797385..799537 + |
|
