MSTRG.13035.1.p1 (mRNA) -

Overview
NameMSTRG.13035.1.p1
Unique NameMSTRG.13035.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000101_pilon:586784..588827-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.13035.1.p1 ID=MSTRG.13035.1.p1|Name=MSTRG.13035.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2044bp|location=Sequence derived from alignment at sc0000101_pilon:586784..588827- (Clytia hemisphaerica_ch_hm2_pilon)
AGGAAATAGTTGATTTTGATACTGGTTCTCGTATTTTATAGGGCAAGCAG
AGCTGAATAGATGATTGTATTGTTGAATTAAAACACAAAACAAAAGAGCA
TTCAAGTTATATAAAAAGGAGATATATTGATGGAGATTCCAGATTCGATT
TCAATCAACACCAACAGCAAGTAGAAGTGACCTTTATGGAAATTGATTTT
AAAAACACACCAATCTCACACAAATAATTGTCAAAATTGAAAAAAAAGGT
GTAAGGTGTGGTATAAAAATCAAAAAATTGTCTTGTGAAAGTAACAGATT
AATTTTAATAACATTATGATTATCAGCGAGAGCTTGAGAGCATCAATGCA
TCGACCATCTTCACCATCTTATGATTTAGACACTGGAACAGGAACTTTAC
TTGAGGAAGGAGGAGGGGGTACGTCCTCATGGTTGAATCTCCCTCAACGG
GAGGATGATGCCCCTATGTCACCCGTCATCTTGCCACCGCATCTTTCAAA
CTCTTTATCCAGTGTCAATTCAAGCAAGTCAGACACCGATCAAAGATATC
AACCACAATATGATTCAAATAGCGATGCGGCATCAGATATGGGCAGAACA
CCTGGAATTGAGATGATGCTGCAATATAATGACTTGAATCGCGAAGTATT
TGAGAATCTTTCATCCAACAACACTGTCACCAACAATAACAATAGATATA
ATGAATATTCTAAACGACTGTACGATAATTTTTACCGGTATAACCAAACA
GCAGCAAACTCTTCTTTTAGTAACGGGGCGTATACTTATCCACGCCCGTC
AAGTTTGTGCGGCGCGAGCTACCCACAACAATACACTCCGTCACCGTATC
ATAATGGTTATACAGACGTTAACAATTCTTACGATTCGATGTCTTCATTT
AATAATAACCCAATAAATGTTACAAACTCAGCCAAGAAACGAAAAATGAG
CCCTACTACACATCCACGTGTACGTAAAACGTCAACCGTACGTGAACGTA
CGCGAACGCATAACGTAAACGATGGATTTGTAACCTTACGTAATTTGATC
CCAACTGATCCACCAGATCGGAAACTTTCGAAAATCGAGACCTTGAGGCT
AGCTTCAAGCTACATTTGGCATTTGAACTCTATTTTGTTGAATTCACCTC
AACAGACTGAGGCGATACATTCTCACGGCACCGATTTATGTTACATCACG
TGCTGTATGGGAACTGACCGTATTTGTACTTTTTGCGTCTCTTTCCTTAA
ATCGATTGGAAGTTTGTGATTTCAGCATTTGAATATTCAAATCATTGTTT
AATACTTTAGTTTTCGTAGAATGAAATGGTATTTTCCGAGAAATGAGACT
CTCAAAAGCAATCTTGTACCCAGAGCCACACAACTTTTTGATTTTGCTGA
ATCTTAAACTTTCCTATCAAAATCATAAGCGAATTAAGGGACTGGGATCG
AGTTCGTGAGTCTCAATAGGCTTCTACAAGAATTCTTGATATTTATGACG
TAATTTTCTATACGGAAACACCAGGCGTTTGCCACTAGTTTTGAATTTAA
ACATTGAAACTGGTGGCAAACGCCCAGTGCTTTTCGTGTGTTTTTCGTAT
AAAAGATTACGTCATGAATATCAAGTATGCGTTTTAAGCAGCGGGATCTA
ACATCTAACAATTTTTTATCCAAACTTATTCCAACAGGCAAAATCCGTGG
TTATCTGACTTAAGTAGTTGATGATCCTGTAAGCGAGATTGATTTCAATT
TCTAGAGTGTCGAAAAAAAAACATAATTTAGTAAAAATGTAAGAGGTTTC
ATGTACATTATTTATGGGGATTTTTTTTACCAAATTTAGTTTTCAAGTTT
TATTTTTATATTCACAAAGTTGATGAATTTTTACTTCGAAATATTAACTT
CACAAAAACTATGAACTGTTAAGTTTTGTAATTTTGACAAAAGATGGATG
ATACACCTAAGTAAGATGCCTATTTCACAGGATTCCTGTTTTTAAATTTT
AGTGCATGATGTTTTTCTACATCACTGCAGTAATCAACTTTTTA

Coding sequence (CDS) from alignment at sc0000101_pilon:586784..588827-

>MSTRG.13035.1.p1 ID=MSTRG.13035.1.p1|Name=MSTRG.13035.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=954bp|location=Sequence derived from alignment at sc0000101_pilon:586784..588827- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATTATCAGCGAGAGCTTGAGAGCATCAATGCATCGACCATCTTCACC
ATCTTATGATTTAGACACTGGAACAGGAACTTTACTTGAGGAAGGAGGAG
GGGGTACGTCCTCATGGTTGAATCTCCCTCAACGGGAGGATGATGCCCCT
ATGTCACCCGTCATCTTGCCACCGCATCTTTCAAACTCTTTATCCAGTGT
CAATTCAAGCAAGTCAGACACCGATCAAAGATATCAACCACAATATGATT
CAAATAGCGATGCGGCATCAGATATGGGCAGAACACCTGGAATTGAGATG
ATGCTGCAATATAATGACTTGAATCGCGAAGTATTTGAGAATCTTTCATC
CAACAACACTGTCACCAACAATAACAATAGATATAATGAATATTCTAAAC
GACTGTACGATAATTTTTACCGGTATAACCAAACAGCAGCAAACTCTTCT
TTTAGTAACGGGGCGTATACTTATCCACGCCCGTCAAGTTTGTGCGGCGC
GAGCTACCCACAACAATACACTCCGTCACCGTATCATAATGGTTATACAG
ACGTTAACAATTCTTACGATTCGATGTCTTCATTTAATAATAACCCAATA
AATGTTACAAACTCAGCCAAGAAACGAAAAATGAGCCCTACTACACATCC
ACGTGTACGTAAAACGTCAACCGTACGTGAACGTACGCGAACGCATAACG
TAAACGATGGATTTGTAACCTTACGTAATTTGATCCCAACTGATCCACCA
GATCGGAAACTTTCGAAAATCGAGACCTTGAGGCTAGCTTCAAGCTACAT
TTGGCATTTGAACTCTATTTTGTTGAATTCACCTCAACAGACTGAGGCGA
TACATTCTCACGGCACCGATTTATGTTACATCACGTGCTGTATGGGAACT
GACCGTATTTGTACTTTTTGCGTCTCTTTCCTTAAATCGATTGGAAGTTT
GTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.13035MSTRG.13035Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13035.1.p1.exon1MSTRG.13035.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13035.1.p1MSTRG.13035.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000101_pilongenomesc0000101_pilon:586784..588827 -