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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000101_pilon:406097..410546+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13028.1.p2 ID=MSTRG.13028.1.p2|Name=MSTRG.13028.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4450bp|location=Sequence derived from alignment at sc0000101_pilon:406097..410546+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGTCCATTACTTTATCTCAACATTTACATGTTACAATGTTTTCTTT
CGTTTCTAgttaaaaatataattcttgaATCATTCAAGCTTTGTTATCAC
AAAGAGAAGAATACAAGAAACTTGAAACAAGATGGACTACATGGCAGACG
GTATGCTcctctttttattttcaataaatatAGTTTACCAGTTAACTACA
TTTATCTGTTGTTACTGGTTGTTAGGAAATTTTAGTACGGAGGATACGAT
ATTttcagttcttacaaagtaactCACTTATTAAAAATAGTACTTTCTTC
AACGTTGATTTATGCACCGCTGCATTGATTTGATATTTCGcattgcaaaa
tttgaaatgtatgTATTTTATACAGGTTTAAATCCAATGTCTGAAGAGGA
TCAACTTCGATTGAAGAAACAACGAGAGAGAAACAACAAGATCAGTAAAT
TGATGGGAGATTATTTGCTGAAAGGCTACAAAATGCTTGGCTCTACTTGC
AATAAATGCCAGGTAAATAGCTACCTTTTTATGGTCATCTCTGTCTGaac
cgatttaaaaaaaaatcgtagCAATAAACAAACTTTGACCAGGGTTTTAT
CGATATTCTTAGAACGAGTAAACATAACAAATTTTAAGAGTTCATGTTCT
AAAGTTGTGTACCGTTTTAAAGTGTTGTTTTTTGTCAGGAAGAAAAGGAG
GACTTTCGAAACTTAATTCTGTTTTCTTCTTAGCCTTTAAAAATGTATAA
GCTTAAAATTGAGTTATTTGCCCAAACTATCTCATATTTTATCAGATGGT
aaaaaaaTACGACCAGTCTCTTATCAGGCTGCTGAGGTATTGTCACCTGT
CGTTCTGCGATTCAAACTAGACCTCAGTCTCCCATAATAGCTGTCTCGCT
TTAACTCGTTTGGGCTCgttcattttcaacttttaacacTAGGCGATATT
ATTACGTGATCGACAAGGAGAGGATTATTGTGTGGGTTGTGTTGAAGTTG
ATGCACCTCCTCAATACCAACCAAATTCATCATCATCTCAATCAAGACCA
AATACAACAAGCCAAATCACAGGTTTGATTTATCGTTCATTTTACTTACA
AGAGCTTGCAAggtgtttttcttcaaaagctcTTCAACTTTGGTTTTAGA
TTCTCTAAAAAATGAAGAGCTTTGACTTTGACAAATCTCTTCAAAAATTC
ACATTtcttgggaaaaacttcaagggAAGTTTATACAGGCAAACAGGAAT
ACAAATTGATTACaaattttcctgaaatgaagaaaaagttcacctaattt
gcaaaatgaaaaatagtaaataaaaaacattagaAGGATTTTGACTGATC
TATAAGCCAATTTTTCTTCTCATAGCGGTTAACCCTATTAACACCAAGCT
TTTTTGGCTTTCGTATCCCAGGGGggtaccaccctcgattattttttatc
tagaagagctatggccatgaaatttggtacagatgttttCCATCATAAAG
CAAATTTCAAGGAAGACaaaaaaaaTGACGAcctcatcacaaaatttcca
cctgtcggaaaaaagcctaTGACCTATGACCCTAAACTTTTGCACAATTA
Ctcttaataaaattttattaaaagtcagatagtttcaagtcgtttgaaaa
ttttttctccgagatatacacaaaataactccagcgtggtagattctact
cCATGGGGCTAATAGGGTAATCGATGGATGTCTTTTTGGACCTAGATTTA
TTTCATCCAAAGTCGAAGCGAATCCTTAATTAttccatttttcaatttta
caggAGGACGAATGGAGTTAGATAGTCGGTCGACACCAACATCTAGAAAT
GAGCCGACCAACTCAACAACATTCAGTAGTAGCGAAAGTGACAAACAGAC
TGTAGAACGTTCTATTGAATGTATTTATGCTCAAATTGCATGGGCTAATC
ATAATTTATCGATTCAAGAAGCCAATTTGGAGCAGAGAAATCAACTGATT
AGTTTCTTACGAAATTGTTTTGAGACGATTGAATGCCTCAAGAAACATCG
GTGATCAAACATCCCTCATCTGCCAAAAATGAGGCTTATAACAGAAAATT
TCATCTCAAACTATGTGAAATTGGTTTTATCTGACTTCGAAATCGATCAA
ATGAACACATGAATTTCCCGTAAACTCTTTTAAAAGGAAGACTGAAATAA
ACTTGTCTGTTTTAAAAGATTTGTTCATTGTCTTGGAACCAATATAAAGT
AATGATCAgtgaaaatgactttttttcggTTAGAATTCTTCACTATTTGG
TTTACATATTTGCATTTAGAAAATTATAAGATTACATTTGTGAATTTaat
caatttaaaattgaaattgaaagagtgatatcataaattttatttgctgt
ctGGTAAATTACTTATCATACCTTTCTTcaatttgttttaaaacaaagtt
TGGTCAAAGAATTGTTGTACTACTTTTTTACTAATTACAAACTCGGTAAT
TAAATATAGACTGTTTTATTTATGCCGCTTTCTCAATTCGATCAGCGATA
AAATTGTCAACTTGTCCTTCCACAATGAACATGGGTACATCACCTAACGA
ACACAACATTGTATGAAATTCACCCACATTGAATCTCTCACCCAGACTCT
CTTCTGCTTTCTTACGATACTCAAGGAATTTATCTTTCCCAAACAGATAA
CATAATGCTTGGCCAGGAAGAAACATATATCTGAAGACTTCATTTCGAAG
CTCCAACTCGTCACAACAACAATTATCTAGCATGAATTGGTAAGCCTTCT
CTCTCGACCATCCATACAAATGAAGACCAACATCCACCACATAACGACAA
GCTAATTCTATTTCTCGTGATATACTCCCAATATGATCATAAACATCGTC
ATAAAGTCCTAGATCGTGACCGATATGTTCTGCATAAGTAGCCCAACCTT
CATGATAAGCTGACTTCATACCAACGTGTGCCGGTAGATCCCAGTATCTC
AGTTCATCAGCGAAACGTCGGTAATCACGAAGGTCTGATTCTGCAGCAAG
AGCAAGTTGGATGTGATGACCTGGTAAAGCTTCGTGAAGAATGATTCCTG
ATACATCGTACTTCTTTCTGCTTTTTGGTGAATATGTGTTCAAAATGAAG
AGCCCTGGCCGGTCTTTTTCCACATCTCCAGCGACATAAGCTCCAACACA
ATAATGTTTTTCAATCTCCACCGGTGCTGGAACGACTTTGTAGGACATTT
TTGGAAGCTTAGAAAAGACTTTCGGTAGAAGGCTGTAAACGCGTTCACTC
TCCTTTTCGTAGACTTCCATCATCTCTTCGCGTGATGAAAAGGAGAATTT
TGGATCTGTTCTCAGGTATTCGATGAATTCACGCTGTGTTCCTTCGAAAC
CGACTTTCTTCTGTTGCTCTTCAAGTTTCGGTTTCAACATTTCCAGTTTC
TCCATTCCCAAGTCAAATATTTCTTTAGCAGTAGTAGCTCCATCGGTATG
GAAACGAACGTATGATTCATAAACTTCAGGTGGTAAACCAGGACCTGGTT
TTGTTTCTGGCATATAGACATCACGAATGAAAATAGCCAGTCTTTCATAC
GCGGGAAGAACAAGTGTGGTCAACAAGTGATTGACATTATCAGCAAAATT
GCTCCATTTTTCATCAGACAACTTCGTTGGTTTATCCTGGAATGGCTGAA
ATAAAGTTGATTCCTCCTTTTGTCTGTTGCAGAATTCTAACAGCATTGGT
GGGTAACATTCAACAACGTTGATGGCAACTGTCTTCTCTAAACGTATTCC
TTCTTTCATCAGCTCGATCATTTGATCGATTTGGATGGAAAACTGGCGAA
GGCGTCGTTTGATGTTTTCTTGACCCTCTGTTGTGTCTTTGGGCATCCAC
GAAAGAAGCCTTGGAAATTTTATATGAGGTCCGTCAGTAGGGTTCAAAGG
GCAGAGATAAGTCTGATGTGtcaatccttcaagaaatgtTTCAGTATCAT
GCTGAAGATAATCTAAATGAATTTGACATCCATTTGATGGAGGCGTTTCC
TCGGCCAATTTACGGATTTTGTGAGCTTCTGCTAACCATGTTTTGGCATC
ATCTCTACGTCGGAGATATCCGTTTAAACTCATGTCCATTAATCGGTCAT
CGTGTTTGTGCTCTCCAACGAACGTGGCGAATTCCGGAATATCCAATAAA
CGCCAACTCCAATAATTGTCAATTGTATTGTTTAGTAGTTCATTTATAtc
catcttttgaaatttcagtaCTTCTATGTGTCAGAGATCTAACTGCTAGA
CGTACCTCTTTTAAAAGCTTCTCTGTTAAATGCTTCGTCTCTTGAGGTTT
ATCTTTCTGATGACCTCCTTGTCAATACTTTATTGTGCACGTCTGTCAGA
CCCTTTACCCTCTTGTTGTTTTTCATTGCAAAAATAACATGACAAGGCTT
Coding sequence (CDS) from alignment at sc0000101_pilon:406097..410546+ >MSTRG.13028.1.p2 ID=MSTRG.13028.1.p2|Name=MSTRG.13028.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2148bp|location=Sequence derived from alignment at sc0000101_pilon:406097..410546+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGACTACATGGCAGACGGTTTAAATCCAATGTCTGAAGAGGATCAACT
TCGATTGAAGAAACAACGAGAGAGAAACAACAAGATCAGTAAATTGATGG
GAGATTATTTGCTGAAAGGCTACAAAATGCTTGGCTCTACTTGCAATAAA
TGCCAGGCGATATTATTACGTGATCGACAAGGAGAGGATTATTGTGTGGG
TTGTGTTGAAGTTGATGCACCTCCTCAATACCAACCAAATTCATCATCAT
CTCAATCAAGACCAAATACAACAAGCCAAATCACAGgAGGACGAATGGAG
TTAGATAGTCGGTCGACACCAACATCTAGAAATGAGCCGACCAACTCAAC
AACATTCAGTAGTAGCGAAAGTGACAAACAGACTGTAGAACGTTCTATTG
AATGTATTTATGCTCAAATTGCATGGGCTAATCATAATTTATCGATTCAA
GAAGCCAATTTGGAGCAGAGAAATCAACTGATTAGTTTCTTACGAAATTG
TTTTGAGACGATTGAATGCCTCAAGAAACATCGGTGAATGGACTACATGG
CAGACGGTTTAAATCCAATGTCTGAAGAGGATCAACTTCGATTGAAGAAA
CAACGAGAGAGAAACAACAAGATCAGTAAATTGATGGGAGATTATTTGCT
GAAAGGCTACAAAATGCTTGGCTCTACTTGCAATAAATGCCAGGCGATAT
TATTACGTGATCGACAAGGAGAGGATTATTGTGTGGGTTGTGTTGAAGTT
GATGCACCTCCTCAATACCAACCAAATTCATCATCATCTCAATCAAGACC
AAATACAACAAGCCAAATCACAGgAGGACGAATGGAGTTAGATAGTCGGT
CGACACCAACATCTAGAAATGAGCCGACCAACTCAACAACATTCAGTAGT
AGCGAAAGTGACAAACAGACTGTAGAACGTTCTATTGAATGTATTTATGC
TCAAATTGCATGGGCTAATCATAATTTATCGATTCAAGAAGCCAATTTGG
AGCAGAGAAATCAACTGATTAGTTTCTTACGAAATTGTTTTGAGACGATT
GAATGCCTCAAGAAACATCGGTGAATGGACTACATGGCAGACGGTTTAAA
TCCAATGTCTGAAGAGGATCAACTTCGATTGAAGAAACAACGAGAGAGAA
ACAACAAGATCAGTAAATTGATGGGAGATTATTTGCTGAAAGGCTACAAA
ATGCTTGGCTCTACTTGCAATAAATGCCAGGCGATATTATTACGTGATCG
ACAAGGAGAGGATTATTGTGTGGGTTGTGTTGAAGTTGATGCACCTCCTC
AATACCAACCAAATTCATCATCATCTCAATCAAGACCAAATACAACAAGC
CAAATCACAGgAGGACGAATGGAGTTAGATAGTCGGTCGACACCAACATC
TAGAAATGAGCCGACCAACTCAACAACATTCAGTAGTAGCGAAAGTGACA
AACAGACTGTAGAACGTTCTATTGAATGTATTTATGCTCAAATTGCATGG
GCTAATCATAATTTATCGATTCAAGAAGCCAATTTGGAGCAGAGAAATCA
ACTGATTAGTTTCTTACGAAATTGTTTTGAGACGATTGAATGCCTCAAGA
AACATCGGTGAATGGACTACATGGCAGACGGTTTAAATCCAATGTCTGAA
GAGGATCAACTTCGATTGAAGAAACAACGAGAGAGAAACAACAAGATCAG
TAAATTGATGGGAGATTATTTGCTGAAAGGCTACAAAATGCTTGGCTCTA
CTTGCAATAAATGCCAGGCGATATTATTACGTGATCGACAAGGAGAGGAT
TATTGTGTGGGTTGTGTTGAAGTTGATGCACCTCCTCAATACCAACCAAA
TTCATCATCATCTCAATCAAGACCAAATACAACAAGCCAAATCACAGgAG
GACGAATGGAGTTAGATAGTCGGTCGACACCAACATCTAGAAATGAGCCG
ACCAACTCAACAACATTCAGTAGTAGCGAAAGTGACAAACAGACTGTAGA
ACGTTCTATTGAATGTATTTATGCTCAAATTGCATGGGCTAATCATAATT
TATCGATTCAAGAAGCCAATTTGGAGCAGAGAAATCAACTGATTAGTTTC
TTACGAAATTGTTTTGAGACGATTGAATGCCTCAAGAAACATCGGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000101_pilon | genome | sc0000101_pilon:406097..410546 + |
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