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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000101_pilon:353893..360301+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13024.1.p1 ID=MSTRG.13024.1.p1|Name=MSTRG.13024.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6409bp|location=Sequence derived from alignment at sc0000101_pilon:353893..360301+ (Clytia hemisphaerica_ch_hm2_pilon)
TAAAAATTTGGTTTTCATGAGGAAACTCAGCAGAAAAAACGGTAGGTGTA
AAGAAccccttttaatcataacttcttttcctcatgatgaatttttatga
aattttcagtagagatccataaaattatcattgatatcatgttcaaatat
aaGTCATTCTTTTTAAGGctgcaatcacaaatatcttcgttacgcgtcgc
ccgaccgactctcaaaaattgagtagaattgagtcggtaaatttgtctga
ctttttctgtcaatgacctttccttcgttcaaaaattttatttttgccga
GTTTTTCAAGCGATTTCTAGCATTcacagcattttgactttgtttatcat
tacatgcgccattttggggtcggaggtcacagtgtCCAAAGGTGATAATT
TTAAATCACCCATtacacgcggttgttttggctgctggctggctggcagt
ttcctccagCAAGAATACACTcaaaaaatggatggaaaaatggaaacccg
aaaacttttagaccgaccgaccgaccgactggcatgggttgacccgggcg
aatgtttgttcacttgccaagtgaaccgttgtgatTGGGAATCGAAACCT
TGGTTGCCTGTACAGGACaattagtcacactagcgtcccgccaaaatgcg
tatcaaagattaatgctgcgaaagcgccatatcgtttacttgactcgcaa
gcaagaaattgcctaaaatttgagccatagatgaaaaagtttgagccaag
ccaaccttgaaaactaatttgaagatcaacttcccaagaaaaagatctac
gggggagacagaacccacctagatccgcgcatgGCCGGATAGGCTaactc
ccggaaattttgccggacctcaaacactgacccatttacatgtgcaaaat
cttttttactttagcgtataggCCTTAAAGATCAAAGCGCTGTCTCTGGA
ATTGAATGataaaatttggttggttgatattctggttACTGCACGTTCAC
AAtcagtcattttgtctcattttaagttttcaagtttttattaattgtct
tgggaacttgaacttgattcaggtaactctcatccttgttgtttcaaata
catcctgtagatgactgatgttgttttttctgaaagctagatttcctagt
gtgactaactgcaggaatcaaggttgatgtccactataccacaacgcctt
ctaaccttccacagtactgaAGTGCGCAACCTACCGTTTTCATGGTGGAg
gaggcgagactcctaaacggtgtattgtccaaaatgaccaaaaaaattga
ccctgtcaggccaaaaaaaaaagtagttttgtttccggaaatgcgggtga
cgaaaaaaaatctcacccgggcggccggaaaatattttttttttcaattt
tcctagaaaaactctaattgacgtgtacgaaaaaataatccaggttcgat
gtctctttacttgaaaaaacgaaattttaagagGAAGCTGTACTCTTAGG
TAATTCTATtcacaacaacataaaacaggaaagtagattgcacaaaaaaa
aaagtttttttctatttgcggccgggtgagatatatttttttctaaaaaa
agctcacccggccgatttccggaaacaagactacttttttttttggcctc
aGGTCcgcatcttgaaaattagtaaattggGGACCCTGTATATACGAGAT
ATCTCTAGAGTTTGTCTAAATTAAAATAAAGGGACTCTGATCAGTGGCAC
GTCCCTGTGTTCTACCTAATTTTGCCAAAGTGCCCTCCCTCGCCCGGGCT
TCTACATGTGCGTTTGCATAGGGTAAAATTGCGAaatacgaaaattgatt
tttaaaaaaaaattttgaaaaatgaccctacaagatttgattatatcttt
ttattccatgaagagattactttcaaatcaaaaatatattgacaatgaat
gggtaagctttctactagaaatccaaacataaattgcatagcttttaggc
ggcaatcacaaatatcttcatttcgcgtcctcgttgggtctaaaaagtga
gttggtCGGTCAGTCGTAAAAAATTTCGGGTTTTCTTACCTcaatcatcc
atttttggagtgtattcttgaaggaaactaccagccagccagcagccaaa
acaatcGTGTGTGTTATGGGTGatctcaaattatgacctttgaacactgt
gacctccgaccaaaatggcgcatgtaatgataaacaaagtcaaaatgctg
tgaatgcgctagaaatcactcgcaaaaaatcggcaataataaaatttttg
aatgaaggaaagaaaaagtctgacaaatttaccgactcaacgtctcaatt
ctactcaattttcaagAGTCGGTCGGGTGGcgcgaaacaaagatatttgt
gattgccgccttaccaaaaaatagcactttaggatcagaaacagtcaaaa
accagctttttccaattttcatcgagttacaggaattaattccttgtttg
ttttgttgatctgaaattttcagtaggggtggccaacatggttcccctgc
tcatatcagggggcccgagacgggggtaagagaactaaagtttctaagta
aaatcttaattatatcacctaaaaaagtgcatttttgtccatttctttta
aatagatagtcccagttccttatccctctttcagtaaagcttcccacaca
agttcgattaaaaaaattaatccaactctaagattttttaaaagattgtg
agtgttcgattaagttcgattaatggGTTTTGGTTCGATCAGTTtgataa
acaaattttgttcgacaagtttgtgctgctccgccagcatatattagctt
cttttaaAGCCAAATttggaatgtaaatcgggaaattacttccgataaca
gattacacacttttcctgtatccttttagcgccagaggcggtttgttggg
gcatagtattccgccactcTGCTGCGCacgaaatcgcaacagaggggcta
cggactttattccggatggatagacaaatatccgggtacaataaacgtca
agcggttaagtccgggaactgtcaaaatggcaatcgcgtgccaggacaaa
gtttttgcaagcgagggaagatatatGAGAACCccttttttttttgaacc
aaTCAAGCCTAATCAaacataataaaataaaattcaacgTAATCAAAGCA
ATCGAACGGTAAATCCTGGGTGATACAGGGTGATATTCTATTACAATTTG
ATTGCATTCAACAATCGAATGGCAattattcaattgcgttcaattcgcgt
tcaattgatttggcgtttgatttgttcgattgacaccatcTGGTTATAAA
CTAGGTTCGTCTTGCCTCTTTTCactttccctttacaacaatatgCTGAC
AAACAAGCTGACAGAACTTTCTTTGCACTGGTGCTGACCAAATCACCCTC
TCAACAGGGGAGTAGGTTGAAGTTTGTGTCTGTCACCTGCggcagatttt
tgaaaaaaagccttcaaatgtttttaGCTTAAATGTTTTTTCCAACTTCA
AGAGAATTCATTAAACTTGTGTTAGCGGCACGGCACGGCAATTTGAAATC
AAGTGACTACCCACTGTATAATGTACGGATCATAATACAATACAATAATA
TATAAATGTTATTACACAATTCTCAAGGTGATAAAAACTAAACTTATACA
CATGAGACAAAATAAATGACATAAAGGAAAGAATTATACTAAATCTACCT
ACAAAAGACCAATGAAATACAAAGTAATAATTGTAAGAACATCAAACAGt
tacacaaaagaaaaaatataaaatcaatgCCGAAACGGCATTAACAGTGG
TAATTTTCATGTAAGATGGGATAAGTATGGTGGTCAAAAGAGGTAACCAC
CGGACGCCCCACCAGACACCACTGCGCAGTGTAGGGCAGTGTCCAGGGTC
GTAAGcattcacttccacaataatttatgtaattacaCTCTCGGTCAGTC
AGGGTTCATCATAATACGCATGTTTTTAGTCACATGACTGAGGTACCTAC
TAAAAAACAATCCGGGGATAAGTGCCAAAGCAACACAGATTATTCTTAAA
GTAAAGAAGTATCATTttgcattgacaatcaaatataatatattacattG
TGAATCTCCAAGCAATTTTTGGCTTTTGCTGGCAATCTGCCGGCACTTTT
TCCACACCATGTCATCCAGCAACTTGCCAGCTACTGTTATTACATTGTTG
GCATTAGAACCGCAATATGCCCGCAAAAACTAAAGCCGGCTAGTTGCCTG
CATCCGCCcatttgtaataattatgcattgccaagtTTGGCTCCCCATTG
TTCTTACTGTCAAGTAACTCCATAATTacttgaaaagttttttattcttc
ttaaaTATACTAAATACTGTTAAAGGGGGTAATATAAGggtgaaaaatct
aaaatttctctgtcgcccaaccatggtgagCCACATAATTTTTTAGCCAC
CTCAATCTAttgcacgccgggggccatatAATTCCATGTTTCAATCTTAC
ATTGAAGACAAATCATActcttgaaagaaaaacattttgcatTATGGATC
CataatattttaagattttgcagGGACTTAATTTTGTGGATGGCACCATT
GGGAGACAATACTTTCCTATGATAACGTTATGAAGTGTCACAATAAtaaa
ctttttgttgaaaatttcattctttgtCTTTTGACGTGATTCCCAAAATC
CATAACACGTAAAATGATAATTAATTACTTTCTTAAGATTTGTTGTTGAA
GCCATTGTCATCATAAAAGTAAGAAAGTCCAGCAAGCAGGAtttttttGC
AAGGTTTGCAAGGGCTAACCTTTTTTAGAATAAGTCTTTTGAGGAAGGAC
ATAAActtaacatttttctttttttagacaTGATTTGTCAGATGTGTGTC
CTTGGATAGGGAATGAATTTTAGTCATCAAGAGATAAAAGCTGAGGTTGA
CAATGAAGTTTGGACATCTAAAAACTATGGTTTTCATTTTAAACAAGAAG
CTGCCTTAGTTGATGGCGAATATAGATTTTCTACTTGTGAACTGCAATAT
TCTTTAGATAGTAATGATGATagagaaaattccttttttgaaGAAGGATC
AGCTTTAAATGATCCTGATCTTGAATGTGAGAATGAAAAGAAATTGTGGA
AATTAAAATTGAAGTAGAAGAAGAAGACTTTTATTTATCAAGCAATGGAA
AAATACCAGCTTATGTTGATCAACCTTTCCGGGCTAACCATTGTCAATCT
ATTTCTGATGAACAGTAGAACTATGATTCAAAAGAGGAAGAAAATTCTGT
AGAGAAAAATTATGTTGCAGGAGGCAAAAAGCTATCAAAAAGCATCAAAA
CTAATAAACAGGGCAAAAGTACTACACAACGATTGCAATGTGATTTATGT
AATGTTCtacttcaaatttaaaaaaccacAAACTAAGAGAACATATTaat
aaaggagaaaaatttatcaaatgtGAAAGTTGTGGTAAAAGTTTTTCTGT
AGAGAAGAGGGCAGACGATTCAAATGTAGTTGGAAATATTGTCAAATGTC
TTTCAGTCAACTTTATGACCTAGAAGCTCATTTGAAAGACGCACATGGAG
GTTTTAAGTGTGTTTCTTGTGAAAAATCTTTCATGACAAAATCAGGTCTT
ATTACACGTCAGAAGGAGTTTCACAAAGATAGGTCTAAATGTCAACATTG
CGGTAAAGTACTAGCTACTGAAGAAAGCCTTAAAAGACATTCAACACGCC
ATCCCTGTcatcaagaaaaaagattttcatgcaTCAAATGTGGAAAAGGC
TTTACAACCAATTCCTCTTTAGCCCTCCATGATAATGAAATACATAAAAT
GATTGAAACTTTCAAATGTAGTATATATGCGGTAAAGCTTATTTGggtta
ttttcgaaaaatctcAGTATAAAAACCACATGAATTCTCACAACAATGTT
AAGCCATTAAAATGCGAAGAATGTGGTAAGCGCTTTCAGCAAAAAACGTG
ATTTGAAGACACACACTGTGATTCTCGTAAAGGTCTGAAACCATTTAAAT
GTGATATTTGTGGAAAGTGTTTTCCAAACGCCAGAAACTTACGAAGACAT
AGCAAAGCTTTACATACAGATATGGAGGTTTCCAGAAAAGCTGATTTAGC
CAGCGAAAACGACGAGGGCGAGGCgcttttaatttaaaattcttattcat
cataacattttgaaagtaattcctttatttaaaagtttttatcaGATCAT
CTACTCCTCTACACACAGATACGGAAGGCGCAAAAAAGATTAGTTAGtca
acatttttataataaaattttcatcaaaagttttaatCAAATTGTGTGCT
CTTTTGAAG Coding sequence (CDS) from alignment at sc0000101_pilon:353893..360301+ >MSTRG.13024.1.p1 ID=MSTRG.13024.1.p1|Name=MSTRG.13024.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=456bp|location=Sequence derived from alignment at sc0000101_pilon:353893..360301+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTTTCAGTCAACTTTATGACCTAGAAGCTCATTTGAAAGACGCACA
TGGAGGTTTTAAGTGTGTTTCTTGTGAAAAATCTTTCATGACAAAATCAG
GTCTTATTACACGTCAGAAGGAGTTTCACAAAGATAGGTCTAAATGTCAA
CATTGCGGTAAAGTACTAGCTACTGAAGAAAGCCTTAAAAGACATTCAAC
ACGCCATCCCTGTcatcaagaaaaaagattttcatgcaTCAAATGTGGAA
AAGGCTTTACAACCAATTCCTCTTTAGCCCTCCATGATAATGAAATACAT
AAAATGATTGAAACTTTCAAATGTAGTATATATGCGGTAAAGCTTATTTG
ggttattttcgaaaaatctcAGTATAAAAACCACATGAATTCTCACAACA
ATGTTAAGCCATTAAAATGCGAAGAATGTGGTAAGCGCTTTCAGCAAAAA
ACGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000101_pilon | genome | sc0000101_pilon:353893..360301 + |
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