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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000006_pilon:1531452..1535311- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.1301.3.p2 ID=MSTRG.1301.3.p2|Name=MSTRG.1301.3.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3860bp|location=Sequence derived from alignment at sc0000006_pilon:1531452..1535311- (Clytia hemisphaerica_ch_hm2_pilon)
ACAAACAATTATTGAAAGACCGATGTTTGATGATTGAAGATCGAGGCAAG
ACATTCCACCCCGAACCACCCTTCTCCGCCCAAGCAGTTCTAGTGTTGTT
GAACGATGGCTTTTGCAAATCAATTATACCTTCTTCTCTGGAAGAATTAC
ACCCTGAAAAAGCGAAAACCTGTAAGTGTGAGATCATTTCTACGACAATT
TTTTTATACGCTGCTTAACTATCAAGAGAATTAAAATTATTTTGTGTTAT
TCATTCCTTTGAAACATCAAAGGTTTATAAATGATAATATTTTGTTTTGA
GTGGATTGAAAAAAAAAACTTTTGCCTTCACTGTGTGCTAGAATTAGGTC
TTAAAAATTAACTCGGGTCCTACATTGTGAAAGAGTTTAATTCAAATTGA
CTTTTCATCCACTTTTTCTACAGTTGATTTTCATGGCTGAGTTGACGGTA
CCTTTGGTATTGTTCCTGATTCTGGTGATCATTCGACAACATCGTCCACC
TGATGAAGCCAGCATCGGTAGGTGCTTTCACAAATTAATGCTGTTCTTAA
AGGCTGGTCTCCACTTTCGCACGACATATGCGAAAACGTTTTTGTAAGGT
CAATGGTCGGTTGAATAATGAAGCAATTCCATTGGTCGAAATTGACGTAA
CGGAAGATAAAAGTAGAACTTCCTTCAACTTTTTTTTTGTTCGTGCGAAA
CTTTTTTATGACGTAATCTTGTCTTCAGGCAAAAAAGGTTAAGAAAAAAC
TGTCGCCCATTTCGCGTGAAAGTGGAGACCGGCCTTAAGATATTGTTTAA
ATTTTGAGAGGGTTATATTCTTCTATACAACAGAAATCATAATTTAAAGC
TTTTACTCACTGGAAAGGCTAACTGCGCACAAATTTTCCGTGGAAAAATT
TCCAGTTTTGAAGTCGACTTCCACCATGTTGTTTTTATTTTACCTCCTAT
TTTCGAACGTTTGAATTTCAAAACATTCGAATCCCGCAGATGGTAAAGCA
GAATAGAAGGAAATGGCAGACTTGCCAGCTCAAAAGCTGGAAACATTTCT
GTTATTATAGGAAGTCCAATGCAGTTGTTAGAAATCAGTGTTCTATACCT
TTTTGGGGATGTCTTTGGGGATAGTATTTGTACACCTTCAATCTTTTATT
CCCTTTGTGTACTAAAGAACTATGAAATTATCCGAGAAATTATCTATAGG
TTTTCCATGAGACCTCTTGTTAAAATCAATGTCTTTTTTTTTCAGCTTCC
TGGGCACCCCTTGCTATGCCATCCGCTGGTATTGTCCCTCTTCTTCAATC
CTTTTGCCCACATAGAGGGTATAAGAAGAATGGCTACTTGGCTTTTCCCG
GATCAAAGTTCGTAATTTTTTTCTTGGAAGATTCTTGGAATCTTTGAAGT
TAGCATATATAAAGATTCTGCTAAATTTTTAGGTATTTTATGTCCCGATT
CTTTGTAAATTAGTCGACACCAACATTTATTTGATATGCATTATGTCACC
TTGATAGCTTTATGCACCTGTTGAAATGCGCTTCACTCGTTAGATATCAC
TATGTTAGATATTTGGATATGTTAGCGCAGGCTTTTGTTCATCAGTCCCT
TGTTAGTCCCCCCACTATCATCCGAATGACTGTTAATGACTTTTAAGTGA
AAAAATTTTCTCCAGAAATGTTTGAAACTCAACTATGAAACTTTATCTGC
AGGATTGAACTGGTTATCAAAGATGTAGCTGACTTAGCAAATACACCTTT
ATTTGACGCCATTCAAGGTTTAAAGAAATTCGAAGAGGATTTTGAAGATT
TTCAAAAGAACCCTTCATTTTCCAATATTCGGAATATTAAAGGTTTGTAC
CCTATATATATGATCTTCCAGTAGTAAAATAGATGAAGAGTATACAAGCG
GTCCGTCATTATCTAACCTACTATTTTGTATGTCATAACAAGGGCCAACT
CTTTTTCCCAATTTCGGCAAGTAAATGCGTTCCACTAGCAATTCTTTTTC
CTTGGTTAATGAGTGAATTCTTTTTGAACGGATTTTCGAACTTTCCATAT
TCCGAACAGAGTCATGTTCCCTATGGTAAACTCTATCTTCTTTCTTCCTT
TTCAGATATCAAGTTTTCTGATTTATTGAAAAAAGATTCAGATTTTGTTG
AGTACCTCGAAAGAAATCTTTCTATGTCTTCACAAATGGCTGAAGGATTT
ATGAATGCTACCTTCAATGGCTCTGAGGTAAGAATTAAGTCTAGTCTTTT
GAATATTATTTCGACCGTTAGATGGAAGTACAGAGGACTCTCCATAACCT
TCAATACTCTCTAAAAAACTCAAAACGAAAAATTCAAAACTCTCTATTAG
TCGAACAAATTTTCGTATCCTCTAAGTGTTCACACAGCAGAAGAATTGGC
TTTGGCAATTTGTTTTGCTTTCCTAATGATTTTTTATTCATTTTGAACAA
AATATTTTCTGATCTTTCACCAGATTTATGTCTTTTTGTTTAGATTTCAT
CAATATTACTGGAGAGAAAGGACGGCTTTGTAAAACAATATCTTCAACAA
ATCGTATCTAAAAAAGCTCCAACTTTCTCCAACCTCAGACGTCTTCAACA
AAGCACTATTCTACAGACCATGTTCGATCCGACTTCGTTACTTTTTGGCC
CGACATGGCTCGGCGCCTTAGCGTCAGTTGCCAATGTCCCTGGTCTTTCA
ATTGGTAAACCAAACTTGAATTCATTGGAGGAAGTCTTCAAAGACATTTT
TTTAAACCAATCAGAAATCAGATATTTATCATGTGATCAAGAGGTCTTCA
ATCAACTGATCACTTTGTCCACTGAATATAAAAACCGCCATGAAACACAC
GTGGAAAAGGTAAAAGCCTCAAAAAGATTCTATTTTTATATTTACTGGGA
TTGACATGCTAGATAATGGAAACTTTTTTCAATTCCATACACGGTTAGAC
AATTTTCCCTGAGCAGATGATTCCATCACTTTCCTGTTAATGACCTAACT
AACAAACATCCGAAATCTACAGTCATTTCTTCAATCTTTTTATAAAAATT
GAATTTTATTTTGTATTCGTGTTTTTAGGACCAACTGCAAGAATTTCTTT
GTAATTTGACGAATGCTCAAGATGCAAGTTTGGCTGGCGAACTTCAACGA
GCCATCAATTGGACTGCTGTTCTTACACAGGTAATGTGTTTACTTTTACC
CTAGTTTCGAACACGTCAAAGCCATAGAAAAATACGCCTACTAAATAACT
GTTTTGAAATTTGTTCGATTTTCTTCTTTCTAGTTTCACACAGATGGTCC
TTCGATTGAGATGTACGAAAAGAAAGCAAAAGTTATCCGAGACGATGTGA
GTCGAATTTAGGTTCAGAATTTTTTAAAGCAATAAATATTACAAATTAGT
TTCATTATATCCTTATAATATTATTACTCAATTTAGAAGTAGAAGAGATT
CTCAGACCTTTGAATTCTTTATTGAAGCCTCTGCAACAAACCCCCTAAAC
TGGTCAAATTCAACTTTCCTAATCTCTTTCAAAATGACGAAATTTCGTAA
TCTATAACAAAAATATGTCACATTTTAGAAATTTTGGCCTTAAATAATTT
TCTTAAATATTGATCCTCTAGATGATGAAATTCCTTGAACTTGAAGATGC
ATTTGGCAAACTGATCAAACTTTCGAAAGATTTGAATGTGAATGTGACGG
AGATATCTAATGCATTGAATAATTCACAATCTGAAGAATTCACACAGAAC
GCTATAAAGCTATGGAAAATACTTTCACCTATTCTTTGTGGCGAGAAGAA
CAGTGCTTGGGAGGGACGCTCCATTGAACAAAGCATGATGGACTTCATGG
CTGGTAAAAA Coding sequence (CDS) from alignment at sc0000006_pilon:1531452..1535311- >MSTRG.1301.3.p2 ID=MSTRG.1301.3.p2|Name=MSTRG.1301.3.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=936bp|location=Sequence derived from alignment at sc0000006_pilon:1531452..1535311- (Clytia hemisphaerica_ch_hm2_pilon)
CTTCCTGGGCACCCCTTGCTATGCCATCCGCTGGTATTGTCCCTCTTCTT
CAATCCTTTTGCCCACATAGAGGGTATAAGAAGAATGGCTACTTGGCTTT
TCCCGGATCAAAGTTCGTAATTTTTTTCTTGGAAGATTCTTGGAATCTTT
GATTGATTTTCATGGCTGAGTTGACGGTACCTTTGGTATTGTTCCTGATT
CTGGTGATCATTCGACAACATCGTCCACCTGATGAAGCCAGCATCGATGG
CTTTTGCAAATCAATTATACCTTCTTCTCTGGAAGAATTACACCCTGAAA
AAGCGAAAACCTCTTCCTGGGCACCCCTTGCTATGCCATCCGCTGGTATT
GTCCCTCTTCTTCAATCCTTTTGCCCACATAGAGGGTATAAGAAGAATGG
CTACTTGGCTTTTCCCGGATCAAAGTTCGTAATTTTTTTCTTGGAAGATT
CTTGGAATCTTTGATTGATTTTCATGGCTGAGTTGACGGTACCTTTGGTA
TTGTTCCTGATTCTGGTGATCATTCGACAACATCGTCCACCTGATGAAGC
CAGCATCGATGGCTTTTGCAAATCAATTATACCTTCTTCTCTGGAAGAAT
TACACCCTGAAAAAGCGAAAACCTCTTCCTGGGCACCCCTTGCTATGCCA
TCCGCTGGTATTGTCCCTCTTCTTCAATCCTTTTGCCCACATAGAGGGTA
TAAGAAGAATGGCTACTTGGCTTTTCCCGGATCAAAGTTCGTAATTTTTT
TCTTGGAAGATTCTTGGAATCTTTGATTGATTTTCATGGCTGAGTTGACG
GTACCTTTGGTATTGTTCCTGATTCTGGTGATCATTCGACAACATCGTCC
ACCTGATGAAGCCAGCATCGATGGCTTTTGCAAATCAATTATACCTTCTT
CTCTGGAAGAATTACACCCTGAAAAAGCGAAAACCT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000006_pilon | genome | sc0000006_pilon:1531452..1535311 - |
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