MSTRG.1301.2.p1 (mRNA) -

Overview
NameMSTRG.1301.2.p1
Unique NameMSTRG.1301.2.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000006_pilon:1493689..1494870-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.1301.2.p1 ID=MSTRG.1301.2.p1|Name=MSTRG.1301.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1182bp|location=Sequence derived from alignment at sc0000006_pilon:1493689..1494870- (Clytia hemisphaerica_ch_hm2_pilon)
ATCTACAATGAGAAACATCAGGTGAATCAAAAGTAGTAAGCAGTGCCGTA
GGAAGCATTTCCATATTGGTGGGGGGGCTGGAGTTTAGTGACACCGCGAG
GGCCAGCCATGGTTTGGCCCGAGGGGGGAAATTTTGAAAGTTTGAGCTCT
AGATTGCTTGAAAATGCACTCAATTGTGACAATTATGACAAATTAAAAAA
GAAAAACTTTGCATTTTGCAAAACAACCATTTTTGAAAAAATTATTGGGG
GGGGCATAGCCCACCCTTGCCCCCCCAGTTGCTACGACGGCACTGGTATG
TACTTATAATTTCAAATTGTATCAATTAAAATTGTCTTCTAATTTCAGCA
ATCCAGATTTAGGTAATGCACGGACACCGCTAAGAACTAACGACATGACA
TTCGCGTTAACCCGGGGTGACATCAATTCTCCGGAGCACGTCAAAAAAGT
ATCTAGTCATAAACGTATTCCTTCGGGAACATCGAAAATTCAAACGATCG
GTAGTGAATCGTGGTCGTATCACGTCGGTACCTCATCAAAAATCAATCGT
AATATCGAACGGTGGCAACAATTTTACGCTCTCATTTTAAAACGTTTTCA
TCACACAAAACGGAACATCAAATCTCTTTTAACACATATTTTCCTTCCTG
GAATTTTCATCTCCATTGCAATGACTGTTGCTTTATCTCAACCGAAAGCC
AACACTTACCCAAAACTGGTTCTCTCTCCAACAATGTTCCATCCACCTCC
TTACCATATCCCTTTCAGCAACAGTAATCCTTCAAGTAACATCTCACGAA
AAATGGAGGAAAGTTTATATCTACCTTCGGGAATAAGTGCAGATTGTGTT
CTTAAGAATCCGAACTCTACACTGAGAGAAGATTTTACGTATCGTTATTT
AAGAGAGAATTTGAAAGAACTGTTTGACCCATTTTGTTATCAACAAGTCG
GTCGAAAGTTTAATACGGAGCTTCCAGAACCAATTTCAAAATCGGAACAA
AATTTCAATATTTCATTGACTTGTAATTGTACAAAGAATTATCAATACAA
ATGTGATGACGGGATTGAAGGAAACCCGGAAACTTTTAATACTGTCACGA
GGGACACATTACATAATATTGAAAATCGTGATTTTTGGACTTATCTGCTG
CAGACGAGCAATTCATTCAAACGAAGAAGGTA

Coding sequence (CDS) from alignment at sc0000006_pilon:1493689..1494870-

>MSTRG.1301.2.p1 ID=MSTRG.1301.2.p1|Name=MSTRG.1301.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1734bp|location=Sequence derived from alignment at sc0000006_pilon:1493689..1494870- (Clytia hemisphaerica_ch_hm2_pilon)
CAATCCAGATTTAGGTAATGCACGGACACCGCTAAGAACTAACGACATGA
CATTCGCGTTAACCCGGGGTGACATCAATTCTCCGGAGCACGTCAAAAAA
GTATCTAGTCATAAACGTATTCCTTCGGGAACATCGAAAATTCAAACGAT
CGGTAGTGAATCGTGGTCGTATCACGTCGGTACCTCATCAAAAATCAATC
GTAATATCGAACGGTGGCAACAATTTTACGCTCTCATTTTAAAACGTTTT
CATCACACAAAACGGAACATCAAATCTCTTTTAACACATATTTTCCTTCC
TGGAATTTTCATCTCCATTGCAATGACTGTTGCTTTATCTCAACCGAAAG
CCAACACTTACCCAAAACTGGTTCTCTCTCCAACAATGTTCCATCCACCT
CCTTACCATATCCCTTTCAGCAACAGTAATCCTTCAAGTAACATCTCACG
AAAAATGGAGGAAAGTTTATATCTACCTTCGGGAATAAGTGCAGATTGTG
TTCTTAAGAATCCGAACTCTACACTGAGAGAAGATTTTACGTATCGTTAT
TTAAGAGAGAATTTGAAAGAACTGTTTGACCCATTTTGTTATCAACAAGT
CGGTCGAAAGTTTAATACGGAGCTTCCAGAACCAATTTCAAAATCGGAAC
AAAATTTCAATATTTCATTGACTTGTAATTGTACAAAGAATTATCAATAC
AAATGTGATGACGGGATTGAAGGAAACCCGGAAACTTTTAATACTGTCAC
GAGGGACACATTACATAATATTGAAAATCGTGATTTTTGGACTTATCTGC
TGCAGACGAGCAATTCATTCAAACGAAGAAGGATCTACAATGAGAAACAT
CAGGTGAATCAAAAGTACAATCCAGATTTAGGTAATGCACGGACACCGCT
AAGAACTAACGACATGACATTCGCGTTAACCCGGGGTGACATCAATTCTC
CGGAGCACGTCAAAAAAGTATCTAGTCATAAACGTATTCCTTCGGGAACA
TCGAAAATTCAAACGATCGGTAGTGAATCGTGGTCGTATCACGTCGGTAC
CTCATCAAAAATCAATCGTAATATCGAACGGTGGCAACAATTTTACGCTC
TCATTTTAAAACGTTTTCATCACACAAAACGGAACATCAAATCTCTTTTA
ACACATATTTTCCTTCCTGGAATTTTCATCTCCATTGCAATGACTGTTGC
TTTATCTCAACCGAAAGCCAACACTTACCCAAAACTGGTTCTCTCTCCAA
CAATGTTCCATCCACCTCCTTACCATATCCCTTTCAGCAACAGTAATCCT
TCAAGTAACATCTCACGAAAAATGGAGGAAAGTTTATATCTACCTTCGGG
AATAAGTGCAGATTGTGTTCTTAAGAATCCGAACTCTACACTGAGAGAAG
ATTTTACGTATCGTTATTTAAGAGAGAATTTGAAAGAACTGTTTGACCCA
TTTTGTTATCAACAAGTCGGTCGAAAGTTTAATACGGAGCTTCCAGAACC
AATTTCAAAATCGGAACAAAATTTCAATATTTCATTGACTTGTAATTGTA
CAAAGAATTATCAATACAAATGTGATGACGGGATTGAAGGAAACCCGGAA
ACTTTTAATACTGTCACGAGGGACACATTACATAATATTGAAAATCGTGA
TTTTTGGACTTATCTGCTGCAGACGAGCAATTCATTCAAACGAAGAAGGA
TCTACAATGAGAAACATCAGGTGAATCAAAAGTA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.1301MSTRG.1301Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.1301.2.p1.exon2MSTRG.1301.2.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.1301.2.p1.exon1MSTRG.1301.2.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.1301.2.p1MSTRG.1301.2.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000006_pilongenomesc0000006_pilon:1493689..1494870 -