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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000101_pilon:211939..214329+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13009.1.p1 ID=MSTRG.13009.1.p1|Name=MSTRG.13009.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2391bp|location=Sequence derived from alignment at sc0000101_pilon:211939..214329+ (Clytia hemisphaerica_ch_hm2_pilon)
CAATCTTATGTAAAACGACGGTAAGATCGGAggtgaaatcttaaaaaaag
tttaaacaaaTAACCGCGAGGCCAGCTTATACATAGTAGTACATTTTATC
TCATTAGTTTTACATCTAGAtagaaaataaatacaaaaatgaagataGTT
TTACCAGCGTTAGCGGCATTATTGATGAATTTACATTCCATATACGCTTG
CACCGACTTTCTCATTGGTTGTCAAGATGGCGCCACTGTCCATGGGCGGA
CAATGGAATTCGAATTTGCTTTCCCGTGGGTGGTTGGTGTTGTGCCTAAG
GGATACAAAGAGACTGCAATGTTGCCGGAAAACTGCCAAAACCATTCACC
ATTAACATGGTTTACTAGATATAAAATTCTAGGAATCAAGTCAGCAGGTG
ATTTCTCAAATTCAAATCGATCAATTGTGGATGGTCAGAACGAGGCTGGC
CTCTCTGCTGGAGCTTTATGGTTCGAAGGGTTTACAGAGTACCCTGATGC
AGTACCTGAGCAACACTGTAGTCACTCCATACCGCATATGCAATTGATCA
ATTATTTGCTAGGTAATGTATATTCTTATTTCTACGTTCATAAGTTCTAC
AATCTTGGCTTACTTAACAAGGATCCTTTTAtcattcagaaaaaaacacc
atGATTTTTCCAAATAAGATCTCCCTCATACAATACATAATTTGATGTTA
TTAAGGTATTTTTTCACCAAGCACTAAATCATTTTAGAGGAAAAAcaatt
tcaagaatattttatgTCACAAACTTGTGAGAAAAAACTCTTAGTACACT
TTATGAAAAACAAGAGATAATATTATATAGTTAGATATTTCATCTTTAGA
TCTATGTGGAGTTAGGtcacaaacaaaaaaactttcattttttgaaaaaa
ataatattttgcttcacaaaaaaGCATCGTTAGCgtgaatgaaaatgttg
aacaaatCTTCACACTTTATAATTTCAGGTAATTTTGCCACCGTTGAGCA
GGTCCGTACATCTTTCAAATACGATATCTTTCCATTTGTTTGGGGTCAAT
ACGTCACGTACTGGCATGGAGACATCAAGATCAATAAATACCAGTTCCCT
CTGCATTTGAGCTTGGCTGACCGAAGTGGAGATTCTATTGTGATTGAATA
CACGAAAGGAAAAGGTCGACAAgtatttgataataaaattgGAATCTTAA
CCAATAGTCCTCCCTATGATTGGCATGTTTTGAATTTAGCCAACTCGATC
AATGTTCAAAATCAAGGTTATCCAGCTAAACATGTGACAAAACAAGGGCG
GAATTACACCATCGAAGCTTTCTGGGATGGAACAGGATTGTTAGGGTTAC
CAGGAGATTTCACACCAGCAAGTAGATTCTTGAGGACTGCAGCAATGATC
AGATTTGCCGAAGAGGCCAAAAATGCAAAAGATGGAGCATTGAAAGCATG
GCATATTATCAACTCAGTTGACATTACAAAAGGTTTAACTTTGTTATGct
attttcaaacatttctaACATATACCTGCCCAAGTACTACAAGGTATTGC
CCTCAAAAAATAATGTTAAGTAGAGGTCTGGCAGTCGCGAAAATATTTCC
ATCGTCATAAAGTGCATCCAATGCTCTCCCAAGGAATTTTCTTCTTGGCC
CCATCATCTTAGCagcaaaataaactttttctttgatgTTCTTGTTAAAC
TGAATTTCAATTTAGCTTGGTGTATGGAGGTCGCCAACGCCGAAATACGG
ACGTTTTCTCTTCAGCATGCCTTTCAAAAGGACACCTATTAATTGATTGT
AATACGTTGTTGTGTTCTCTTTCCTATATTCAGGAACAAGTGAAGACTAC
ACAGTGTTCTCAGTGGTAAAAGATTTGACCAATAATATCATGTACTTCAG
AGCACATGACTATATTAGTATACGATCCATTCATTTGAACAAATTGAGTG
GTGAAAGTGGGAAACAAATTCCTGTTGAAGACACTTTTGAAAATAGTGTC
AAAGATATTACCGAAGATTTTGGAGATAATTGGTAGAATGCGGTGGTGTA
AATATTGTGCAAATCTCAGTGTTGTACCGACCTTCCTTTGATGTTTCATT
CCAGCTTGTATAAGAAGTTGTTGCTTGGACAACAGTGTAAATATTTCCCT
TGATTCGTTTGATTCGGTTGATCTATTTGATTGCTGAAACATAATCTTGT
TGAAACATAAACatgcaaaaattcaaattttctgatgTATCAGTTTTATA
TGATATTTGATAAGAAATTCTCAAGCTCAGTGGAATATCAAAATACTTAG
AGACTTCCCATCAGTCCCCCCGGGGGTGGGGgaacttaggcaaatggagg
gtacggtatgtgccacccttaagggtacctttattggattt Coding sequence (CDS) from alignment at sc0000101_pilon:211939..214329+ >MSTRG.13009.1.p1 ID=MSTRG.13009.1.p1|Name=MSTRG.13009.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3393bp|location=Sequence derived from alignment at sc0000101_pilon:211939..214329+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaagataGTTTTACCAGCGTTAGCGGCATTATTGATGAATTTACATTC
CATATACGCTTGCACCGACTTTCTCATTGGTTGTCAAGATGGCGCCACTG
TCCATGGGCGGACAATGGAATTCGAATTTGCTTTCCCGTGGGTGGTTGGT
GTTGTGCCTAAGGGATACAAAGAGACTGCAATGTTGCCGGAAAACTGCCA
AAACCATTCACCATTAACATGGTTTACTAGATATAAAATTCTAGGAATCA
AGTCAGCAGGTGATTTCTCAAATTCAAATCGATCAATTGTGGATGGTCAG
AACGAGGCTGGCCTCTCTGCTGGAGCTTTATGGTTCGAAGGGTTTACAGA
GTACCCTGATGCAGTACCTGAGCAACACTGTAGTCACTCCATACCGCATA
TGCAATTGATCAATTATTTGCTAGGTAATTTTGCCACCGTTGAGCAGGTC
CGTACATCTTTCAAATACGATATCTTTCCATTTGTTTGGGGTCAATACGT
CACGTACTGGCATGGAGACATCAAGATCAATAAATACCAGTTCCCTCTGC
ATTTGAGCTTGGCTGACCGAAGTGGAGATTCTATTGTGATTGAATACACG
AAAGGAAAAGGTCGACAAgtatttgataataaaattgGAATCTTAACCAA
TAGTCCTCCCTATGATTGGCATGTTTTGAATTTAGCCAACTCGATCAATG
TTCAAAATCAAGGTTATCCAGCTAAACATGTGACAAAACAAGGGCGGAAT
TACACCATCGAAGCTTTCTGGGATGGAACAGGATTGTTAGGGTTACCAGG
AGATTTCACACCAGCAAGTAGATTCTTGAGGACTGCAGCAATGATCAGAT
TTGCCGAAGAGGCCAAAAATGCAAAAGATGGAGCATTGAAAGCATGGCAT
ATTATCAACTCAGTTGACATTACAAAAGGAACAAGTGAAGACTACACAGT
GTTCTCAGTGGTAAAAGATTTGACCAATAATATCATGTACTTCAGAGCAC
ATGACTATATTAGTATACGATCCATTCATTTGAACAAATTGAGTGGTGAA
AGTGGGAAACAAATTCCTGTTGAAGACACTTTTGAAAATAGTGTCAAAGA
TATTACCGAAGATTTTGGAGATAATTGGTAGatgaagataGTTTTACCAG
CGTTAGCGGCATTATTGATGAATTTACATTCCATATACGCTTGCACCGAC
TTTCTCATTGGTTGTCAAGATGGCGCCACTGTCCATGGGCGGACAATGGA
ATTCGAATTTGCTTTCCCGTGGGTGGTTGGTGTTGTGCCTAAGGGATACA
AAGAGACTGCAATGTTGCCGGAAAACTGCCAAAACCATTCACCATTAACA
TGGTTTACTAGATATAAAATTCTAGGAATCAAGTCAGCAGGTGATTTCTC
AAATTCAAATCGATCAATTGTGGATGGTCAGAACGAGGCTGGCCTCTCTG
CTGGAGCTTTATGGTTCGAAGGGTTTACAGAGTACCCTGATGCAGTACCT
GAGCAACACTGTAGTCACTCCATACCGCATATGCAATTGATCAATTATTT
GCTAGGTAATTTTGCCACCGTTGAGCAGGTCCGTACATCTTTCAAATACG
ATATCTTTCCATTTGTTTGGGGTCAATACGTCACGTACTGGCATGGAGAC
ATCAAGATCAATAAATACCAGTTCCCTCTGCATTTGAGCTTGGCTGACCG
AAGTGGAGATTCTATTGTGATTGAATACACGAAAGGAAAAGGTCGACAAg
tatttgataataaaattgGAATCTTAACCAATAGTCCTCCCTATGATTGG
CATGTTTTGAATTTAGCCAACTCGATCAATGTTCAAAATCAAGGTTATCC
AGCTAAACATGTGACAAAACAAGGGCGGAATTACACCATCGAAGCTTTCT
GGGATGGAACAGGATTGTTAGGGTTACCAGGAGATTTCACACCAGCAAGT
AGATTCTTGAGGACTGCAGCAATGATCAGATTTGCCGAAGAGGCCAAAAA
TGCAAAAGATGGAGCATTGAAAGCATGGCATATTATCAACTCAGTTGACA
TTACAAAAGGAACAAGTGAAGACTACACAGTGTTCTCAGTGGTAAAAGAT
TTGACCAATAATATCATGTACTTCAGAGCACATGACTATATTAGTATACG
ATCCATTCATTTGAACAAATTGAGTGGTGAAAGTGGGAAACAAATTCCTG
TTGAAGACACTTTTGAAAATAGTGTCAAAGATATTACCGAAGATTTTGGA
GATAATTGGTAGatgaagataGTTTTACCAGCGTTAGCGGCATTATTGAT
GAATTTACATTCCATATACGCTTGCACCGACTTTCTCATTGGTTGTCAAG
ATGGCGCCACTGTCCATGGGCGGACAATGGAATTCGAATTTGCTTTCCCG
TGGGTGGTTGGTGTTGTGCCTAAGGGATACAAAGAGACTGCAATGTTGCC
GGAAAACTGCCAAAACCATTCACCATTAACATGGTTTACTAGATATAAAA
TTCTAGGAATCAAGTCAGCAGGTGATTTCTCAAATTCAAATCGATCAATT
GTGGATGGTCAGAACGAGGCTGGCCTCTCTGCTGGAGCTTTATGGTTCGA
AGGGTTTACAGAGTACCCTGATGCAGTACCTGAGCAACACTGTAGTCACT
CCATACCGCATATGCAATTGATCAATTATTTGCTAGGTAATTTTGCCACC
GTTGAGCAGGTCCGTACATCTTTCAAATACGATATCTTTCCATTTGTTTG
GGGTCAATACGTCACGTACTGGCATGGAGACATCAAGATCAATAAATACC
AGTTCCCTCTGCATTTGAGCTTGGCTGACCGAAGTGGAGATTCTATTGTG
ATTGAATACACGAAAGGAAAAGGTCGACAAgtatttgataataaaattgG
AATCTTAACCAATAGTCCTCCCTATGATTGGCATGTTTTGAATTTAGCCA
ACTCGATCAATGTTCAAAATCAAGGTTATCCAGCTAAACATGTGACAAAA
CAAGGGCGGAATTACACCATCGAAGCTTTCTGGGATGGAACAGGATTGTT
AGGGTTACCAGGAGATTTCACACCAGCAAGTAGATTCTTGAGGACTGCAG
CAATGATCAGATTTGCCGAAGAGGCCAAAAATGCAAAAGATGGAGCATTG
AAAGCATGGCATATTATCAACTCAGTTGACATTACAAAAGGAACAAGTGA
AGACTACACAGTGTTCTCAGTGGTAAAAGATTTGACCAATAATATCATGT
ACTTCAGAGCACATGACTATATTAGTATACGATCCATTCATTTGAACAAA
TTGAGTGGTGAAAGTGGGAAACAAATTCCTGTTGAAGACACTTTTGAAAA
TAGTGTCAAAGATATTACCGAAGATTTTGGAGATAATTGGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000101_pilon | genome | sc0000101_pilon:211939..214329 + |
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