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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000101_pilon:12870..16441+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.12987.2.p1 ID=MSTRG.12987.2.p1|Name=MSTRG.12987.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3572bp|location=Sequence derived from alignment at sc0000101_pilon:12870..16441+ (Clytia hemisphaerica_ch_hm2_pilon)
TCCAGATGCCTGAGGTTTGCTTGAAAGACTGTCAAGCATGGAGGGATGTC
GGCCTCACGATGACTACTACAAGTAATGAGGCATGTAAATTATTTGATGA
TGTGATCACCCAATATATCACTTGGACGGAGAGTCCTGATGGTATGGAAA
ATACCGTCGTAAAGCTACTTGAATCTGATTCTAATTTCATGATGGGTCAA
GCTTTATCGATTGGGTTGGATATGATGGGAACTGGTCGTGCACTTCATTT
GGATAAGGAGTTAGCGGAACAAATTAATAAATTTGAAAGTGATTTCAATA
AGTCTGAGATTACACCAcgagaaaaattacactgccaAAGTGTAGTGTAT
TTTGCTAAAGGTGAATACACGAAAGCCTGTGAATCTTGGGAAGAGATTTT
GAAAGTCTATCCTAAGGACAGTTTAGCTATCAAGTTCGCGCATGATAGTT
ATTTTTATCTGGGTGATTCGGTCAAGATTCGGGATAGTGTGGACAGAGTT
TTACCATACTGGAAATCGAGTGATCCCTTATATGGTTATCTTAAAGGAAT
GCTCGCCTTTGGTTTAGAAGAAACATACCGATACGAAGAAGCTCAAAAAA
GTAGCGAAGAAGCTCTCTCGTTAAACCCAACGGACTGTTGGGCTACGCAT
GCTAAAGCTCATTGTTTTGAAATGACAGGACGTTTTAATCAAGGAATCGA
GTTCTTAAAAGATACTGAGAATGATTGGGCTAAAGGTCGAATGCTAGCCT
GTCATAATTATTGGCATTGGGCGCTTTATCATATCGAACGAGGAGATTAT
GAAACAGCATTAGGAATCTATGATCATCAAGTTGAAGAGAGAAGTAAGAG
CTCGGGGGCTATGCTGGATATGGTCGATGCGGCTTCCTTACTACAAAGAT
TCGAAATGCAAGGAGTCAACGTTGGTGATCGTTGGAAAGAAATTTACGAG
TTGGCTTTACCACATATTAATGATCATATCACTGTGTTTAATGATTTTCA
TATGACGATGGCTTTCCTAGGGTGTGGGAAAACAGATGTTGCGTCCCGTT
ATATGAAATCGCTGAGAGATTACTGCGCTCATCATTCTAGCTACAGTCGA
GATTTGTTTCATAAAATGGGTGTTGATCTTTGCGATGGCTTAATAGCATT
TTCTGAGGACCGATTTGTTGCAGCTGTTCAGTTGTGGTACCCTTTgaaag
atgacgtcatcggtaTGGGTGGAAGTCATGCACAACGAGATGTTTTTGAT
CAACTTTTGTTAAACGCTTGTATCGATTCCCCGAAAAATGAAGACCGTGA
TTTAGCGCAACAAATGTTGAGTGAACgcaaaaagaagagagaaaattCTC
CACTCACGGACAGGTTAATGCAGAAACTGCTTGCGAAACATTAGTGATAC
GTTGATCAGCTAACATAATATACACTGAAATGTACGGGTCGTGTTAAAGA
CAACGGAGAACATATTTCACTTCTTTTACTTCTTCGATTTTAGTTTCATT
CATGAGACACCCCTGTCTTATTGAGCCAGTGTACTTCTTCGATTTTAcct
tattacacgtttttttttttattagaacctagtttataagaacatatagg
ctgaaattcgtcgaaaaattaagaacatcttaagaacatgcccagcctca
gtttggaaaaaaatggcgagaaactacaatttttccctctttttaaccga
atttaggggtggatcttcaaaagttgAGAGTcgaatattgtccaaatttt
gccaaatttaagtgctctttattttgtatcatattgtcgatttagagtag
tctgaaaaattaagaacgcattaaagaacattttaggctgaaaattgcta
aaaaaataagcacattcaggctcagccaaattttaggtgttctaataaaa
aaaaaaacgtgtacatgaaaataaatattgaagtatttaacacgaattga
aaaatttcgtgttaataaaaacccccttaactaaaaagcaaataaaattt
gtgttaattttttgcgtgttaatttcaaggccgttaaatacttccatatt
tattttcatgtaataaggtagtttCATTCATGAGACACCCATGTCTTATT
GAGTCAGCTCAGTTGTTGTGAAATCAATCGGGGtggctatgaaaaaaatt
aatttcaccGGGTTTGAATTTGAATCTTAGCTCACTGAGGGTGAGAGCTT
TTAGCTGTTTCACCGGGGTGGggtaaatgttttcattttaaagcattCGA
GAGTTGGTTTACCGAGAATTCACTTACTATTAATAtgcacttttttgttt
ttaccaGGTTGCCCTAATTTATGCAATTTTTGACCGGGGTAGGACAATAA
TTATTCAAGTTTTGATCggggggggAGTAGAGAACTTCAATAAATCTTTA
CCGTGGGTTACTGTACTCATTATCCCACCGGGCCATaaaattgtataatt
tttgtcaattgttttcttcttcagtGGTTCATCTCACCGGGTTACTGTTA
CATGGATGTCATGAGAAGGGTAATTTCTATCGCCTCCTCTAAACAGATGA
CTTTGCTGGTCTGAGATTTGTAAACTAGCTGTAGGATGAAAAAAGTAATG
TTATGACCCACGATTTTTTATATTGTACAACATCAATGTCTTACGTAGTA
AGAGTTTGGCCTGAACATATATACTAGAGGATTGGCTTTTCTTTAGGAAT
CTTTCAAGGAAAACAGGTCGTACGAATTTTTTCGTTTTCGAGGACTCGAA
ATCTAAGTTATcatagtatgaacccccccccccttttttaaggggggggg
atccgagttttcaaggaaggctttataggggggatgggcaattttccagt
taaaatggggggtttgagcttataggggggggtcaaataaaaatgggggg
gatagtaattttttggttaaaaaattactagtttactgtttatttgctag
tgttttcaagttcattgaCTGTTGGTACGAATTCacactgaaaaatatat
ttcattcatcaaaattcttccccaatactgggagtacaaattatatgctg
ggggctcggacccctgtaaatggtgcgggatcaaaaaattttaaaaatag
ggggatacctttatagggggggatgaaatattaatgggggggttcagacc
cctctgcacactatggttATTATATGGGTTTTTAATTTGAACTTGTATTT
GTACACATCATATATTATATTCGCATTtcatttttgagagtttttaTCAT
CTGCAtctagtgaacaaaaaatattaaaaatttctccTCATATGCCACCT
GTCAGCAAATTTGTAATtctcctgtgaaaatgataattataccacatttc
tacaagaagttgattttttggacctaccccggtggggtgaaggtcctata
aattcacctctgtccgttcgtccgtctgtccgttccttaccagcttttct
cgagattgaatcataggaatcatttgatttttggtacaaaggtgcaaaac
agtggtggccaaaatgtgacggagcccgattttcgaaaaaaaaatttttt
gggcaaatttgggccaaaaaac Coding sequence (CDS) from alignment at sc0000101_pilon:12870..16441+ >MSTRG.12987.2.p1 ID=MSTRG.12987.2.p1|Name=MSTRG.12987.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1203bp|location=Sequence derived from alignment at sc0000101_pilon:12870..16441+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTCAAGCTTTATCGATTGGGTTGGATATGATGGGAACTGGTCGTGC
ACTTCATTTGGATAAGGAGTTAGCGGAACAAATTAATAAATTTGAAAGTG
ATTTCAATAAGTCTGAGATTACACCAcgagaaaaattacactgccaAAGT
GTAGTGTATTTTGCTAAAGGTGAATACACGAAAGCCTGTGAATCTTGGGA
AGAGATTTTGAAAGTCTATCCTAAGGACAGTTTAGCTATCAAGTTCGCGC
ATGATAGTTATTTTTATCTGGGTGATTCGGTCAAGATTCGGGATAGTGTG
GACAGAGTTTTACCATACTGGAAATCGAGTGATCCCTTATATGGTTATCT
TAAAGGAATGCTCGCCTTTGGTTTAGAAGAAACATACCGATACGAAGAAG
CTCAAAAAAGTAGCGAAGAAGCTCTCTCGTTAAACCCAACGGACTGTTGG
GCTACGCATGCTAAAGCTCATTGTTTTGAAATGACAGGACGTTTTAATCA
AGGAATCGAGTTCTTAAAAGATACTGAGAATGATTGGGCTAAAGGTCGAA
TGCTAGCCTGTCATAATTATTGGCATTGGGCGCTTTATCATATCGAACGA
GGAGATTATGAAACAGCATTAGGAATCTATGATCATCAAGTTGAAGAGAG
AAGTAAGAGCTCGGGGGCTATGCTGGATATGGTCGATGCGGCTTCCTTAC
TACAAAGATTCGAAATGCAAGGAGTCAACGTTGGTGATCGTTGGAAAGAA
ATTTACGAGTTGGCTTTACCACATATTAATGATCATATCACTGTGTTTAA
TGATTTTCATATGACGATGGCTTTCCTAGGGTGTGGGAAAACAGATGTTG
CGTCCCGTTATATGAAATCGCTGAGAGATTACTGCGCTCATCATTCTAGC
TACAGTCGAGATTTGTTTCATAAAATGGGTGTTGATCTTTGCGATGGCTT
AATAGCATTTTCTGAGGACCGATTTGTTGCAGCTGTTCAGTTGTGGTACC
CTTTgaaagatgacgtcatcggtaTGGGTGGAAGTCATGCACAACGAGAT
GTTTTTGATCAACTTTTGTTAAACGCTTGTATCGATTCCCCGAAAAATGA
AGACCGTGATTTAGCGCAACAAATGTTGAGTGAACgcaaaaagaagagag
aaaattCTCCACTCACGGACAGGTTAATGCAGAAACTGCTTGCGAAACAT
TAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000101_pilon | genome | sc0000101_pilon:12870..16441 + |
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